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Experiment Zebrafish_28hpf_whole2, section s29.

Sample reads: 133,392. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 12206.88 91512.32
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4234.40 31744.38 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoa1b ENSDARG00000101324 2224.89 16679.52 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
4. apoc1l apoc1l 1601.36 12005.05
5. tmsb4x ENSDARG00000077777 1510.84 11326.44 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
6. apobb apobb 1478.06 11080.69
7. tpma ENSDARG00000033683 1409.39 10565.89 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
8. mt-nd2 ENSDARG00000063899 1343.83 10074.40 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
9. zgc:161979 zgc:161979 1284.52 9629.77
10. apoeb ENSDARG00000040295 1271.26 9530.36 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
11. apoa2 ENSDARG00000015866 1242.38 9313.85 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
12. mt-atp6 ENSDARG00000063911 1211.17 9079.88 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
13. zgc:161979_1 zgc:161979_1 1196.34 8968.70
14. mt-co2 ENSDARG00000063908 1185.41 8886.76 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
15. ckmb ENSDARG00000040565 1098.79 8237.39 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
16. ckma ENSDARG00000035327, ENSDARG00000114671 1086.30 8143.75 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
17. atp2a1 ENSDARG00000020574 892.77 6692.90 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
18. mt-nd4 ENSDARG00000063917 889.65 6669.51 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
19. apoa1a ENSDARG00000012076, ENSDARG00000110395 825.65 6189.72 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
20. mt-co3 ENSDARG00000063912 817.85 6131.24 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
21. actb2 ENSDARG00000037870 816.29 6119.55 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
22. hbbe3 ENSDARG00000038147, ENSDARG00000109344 773.37 5797.79 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
23. apoa4 apoa4 748.39 5610.52
24. pvalb2 ENSDARG00000002768, ENSDARG00000114085 698.45 5236.13 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
25. mylz3 ENSDARG00000017441 658.65 4937.76 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
26. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 636.80 4773.95 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
27. actc1b ENSDARG00000099197 605.58 4539.90 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
28. actb1 ENSDARG00000037746, ENSDARG00000113649 587.63 4405.33 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
29. mt-nd1 ENSDARG00000063895 571.25 4282.54 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
30. bhmt ENSDARG00000013430 569.69 4270.84 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
31. eef1a1l1 ENSDARG00000020850 554.08 4153.82 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
32. si:dkey-151g10.6 si:dkey-151g10.6 534.57 4007.55
33. fabp2 ENSDARG00000006427, ENSDARG00000110230 505.69 3791.05 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
34. mt-cyb ENSDARG00000063924 501.01 3755.96 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
35. hbae3 ENSDARG00000079305 490.87 3679.95 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
36. zgc:153129 zgc:153129 451.07 3381.57
37. tnnc2 ENSDARG00000070835, ENSDARG00000111155 430.00 3223.62 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
38. zgc:112425 zgc:112425 420.63 3153.37
39. eef2b ENSDARG00000100371, ENSDARG00000109247 380.83 2855.00 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
40. acta1b ENSDARG00000055618 349.62 2621.03 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
41. hbbe1.1 ENSDARG00000113599 344.93 2585.87 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
42. hmga1a ENSDARG00000028335 338.69 2539.09 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
43. zgc:92533 zgc:92533 306.69 2299.19
44. hspa8 ENSDARG00000068992, ENSDARG00000114726 303.57 2275.80 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
45. rpl18a ENSDARG00000025073 298.11 2234.87 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
46. ppiaa ENSDARG00000009212 293.43 2199.78 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
47. rbp4 ENSDARG00000101199 291.09 2182.24 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
48. ctsla ENSDARG00000007836 287.18 2152.93 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
49. pvalb1 ENSDARG00000037789 274.70 2059.37 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
50. sepp1a 271.58 2035.98 selenoprotein P, plasma, 1a
51. si:ch211-226o13.2 270.80 2030.13 si:ch211-226o13.2
52. apoc2 ENSDARG00000092155 270.02 2024.28 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
53. hbae1_1 266.11 1994.97 hemoglobin, alpha embryonic 1
54. rpl10a ENSDARG00000042905, ENSDARG00000115649 263.77 1977.43 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
55. mt-co1 ENSDARG00000063905 256.75 1924.80 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
56. fetub ENSDARG00000053973 254.41 1907.26 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
57. pla2g12b ENSDARG00000015662 254.41 1907.26 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
58. zgc:113413 zgc:113413 254.41 1907.26
59. gatm ENSDARG00000036239 252.07 1889.71 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
60. rps27a ENSDARG00000032725, ENSDARG00000114059 252.07 1889.71 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
61. btf3 ENSDARG00000035400, ENSDARG00000116462 241.92 1813.62 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
62. myl1 ENSDARG00000014196 236.46 1772.69 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
63. rpl23 ENSDARG00000053457 236.46 1772.69 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
64. rpl8 ENSDARG00000014867 236.46 1772.69 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
65. tnnt3a ENSDARG00000030270 236.46 1772.69 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
66. myhz1.3 ENSDARG00000067997 231.78 1737.60 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
67. rpl36a ENSDARG00000058105, ENSDARG00000112656 226.31 1696.60 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
68. ttna ttna 220.85 1655.66
69. rps23 ENSDARG00000021838 219.29 1643.97 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
70. rpl21 ENSDARG00000010516, ENSDARG00000110263 214.61 1608.88 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
71. paics ENSDARG00000033539 212.27 1591.34 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
72. rpl26 ENSDARG00000102317 209.14 1567.88 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
73. ptmab ENSDARG00000101766 205.24 1538.64 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
74. eif5a ENSDARG00000017235 202.90 1521.10 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
75. psap ENSDARG00000013968 195.10 1462.62 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
76. cfl1l ENSDARG00000012972 191.20 1433.38 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
77. fabp3 ENSDARG00000023290 191.20 1433.38 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
78. tfa ENSDARG00000016771 190.42 1427.54 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
79. rps2 ENSDARG00000077291 187.29 1404.07 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
80. pabpc1a ENSDARG00000017219 184.95 1386.53 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
81. cyt1l ENSDARG00000036832 182.61 1368.99 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
82. pvalb9 ENSDARG00000071601, ENSDARG00000113946 181.05 1357.29 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
83. ahcy ENSDARG00000005191 178.71 1339.75 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
84. acta1a ENSDARG00000036371 177.15 1328.05 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
85. tnnt3b ENSDARG00000068457 176.37 1322.21 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
86. rpl11 ENSDARG00000043509 174.03 1304.67 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
87. aldoab ENSDARG00000034470 170.91 1281.28 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
88. rpl9 ENSDARG00000037350, ENSDARG00000112384 170.91 1281.28 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
89. rplp1 ENSDARG00000021864 169.34 1269.51 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
90. mylpfb ENSDARG00000002589 166.22 1246.12 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
91. hbbe1.1_1 ENSDARG00000113599 163.10 1222.73 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
92. krt8 ENSDARG00000058358, ENSDARG00000109279 162.32 1216.88 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
93. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 162.32 1216.88 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
94. rps3 ENSDARG00000103007 162.32 1216.88 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
95. ctsba ENSDARG00000055120 161.54 1211.03 cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
96. rps14 ENSDARG00000036629 161.54 1211.03 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
97. fth1a ENSDARG00000015551 157.64 1181.79 ferritin, heavy polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-000831-2]
98. APOB APOB 156.08 1170.10
99. tnni2a.4 ENSDARG00000029069 156.08 1170.10 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
100. ATP5B 155.30 1164.25 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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