Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_28hpf_whole2, section s26.

Sample reads: 133,414. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 22530.03 168875.83
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3535.24 26498.70 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tmsb4x ENSDARG00000077777 1429.02 10711.35 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. apoa1b ENSDARG00000101324 1129.65 8467.39 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
5. mt-co2 ENSDARG00000063908 1111.24 8329.40 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. mt-nd2 ENSDARG00000063899 1111.24 8329.40 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
7. mt-nd4 ENSDARG00000063917 1096.71 8220.49 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
8. hbae3 ENSDARG00000079305 1085.08 8133.31 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
9. mt-atp6 ENSDARG00000063911 997.89 7479.77 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
10. hbbe3 ENSDARG00000038147, ENSDARG00000109344 980.45 7349.05 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
11. apoc1l apoc1l 969.79 7269.15
12. mt-co3 ENSDARG00000063912 797.34 5976.53 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
13. apobb apobb 767.31 5751.44
14. tpma ENSDARG00000033683 736.31 5519.08 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
15. zgc:161979_1 zgc:161979_1 714.99 5359.27
16. atp2a1 ENSDARG00000020574 708.21 5308.45 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
17. actb2 ENSDARG00000037870 692.71 5192.27 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
18. hbbe1.1 ENSDARG00000113599 685.93 5141.45 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
19. ckmb ENSDARG00000040565 679.15 5090.63 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
20. zgc:161979 zgc:161979 662.68 4967.18
21. he1a 635.55 4763.82 hatching enzyme 1a, transcript variant X1
22. apoa2 ENSDARG00000015866 560.95 4204.65 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
23. mt-cyb ENSDARG00000063924 549.32 4117.48 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
24. ckma ENSDARG00000035327, ENSDARG00000114671 548.36 4110.28 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
25. mt-nd1 ENSDARG00000063895 547.39 4103.01 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
26. zgc:112425 zgc:112425 540.60 4052.12
27. eef1a1l1 ENSDARG00000020850 512.51 3841.56 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
28. apoeb ENSDARG00000040295 488.29 3660.02 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
29. apoa1a ENSDARG00000012076, ENSDARG00000110395 456.32 3420.39 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
30. actb1 ENSDARG00000037746, ENSDARG00000113649 439.85 3296.93 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
31. eef2b ENSDARG00000100371, ENSDARG00000109247 425.31 3187.95 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
32. hbae1_1 425.31 3187.95 hemoglobin, alpha embryonic 1
33. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 425.31 3187.95 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
34. zgc:174855 ENSDARG00000094559 404.97 3035.49 zgc:174855 [Source:ZFIN;Acc:ZDB-GENE-071004-74]
35. hmga1a ENSDARG00000028335 399.16 2991.94 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
36. actc1b ENSDARG00000099197 396.25 2970.13 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
37. pvalb2 ENSDARG00000002768, ENSDARG00000114085 396.25 2970.13 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
38. apoa4 apoa4 393.34 2948.31
39. bhmt ENSDARG00000013430 373.00 2795.85 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
40. si:dkey-151g10.6 si:dkey-151g10.6 373.00 2795.85
41. ppiaa ENSDARG00000009212 371.06 2781.31 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
42. ctslb ENSDARG00000039173, ENSDARG00000074306 361.37 2708.68 cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
43. mylz3 ENSDARG00000017441 342.00 2563.49 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
44. si:dkey-269i1.3 317.77 2381.87 si:dkey-269i1.3
45. mt-co1 ENSDARG00000063905 316.81 2374.68 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
46. cyt1l ENSDARG00000036832 300.34 2251.22 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
47. pabpc1a ENSDARG00000017219 283.87 2127.77 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
48. hspa8 ENSDARG00000068992, ENSDARG00000114726 281.93 2113.23 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
49. rpl18a ENSDARG00000025073 278.05 2084.15 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
50. AL935210.1 ENSDARG00000088330 276.12 2069.68 hemoglobin, alpha embryonic 1.3 [Source:NCBI gene;Acc:572729]
51. hbbe1.1_1 ENSDARG00000113599 264.49 1982.51 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
52. tnnc2 ENSDARG00000070835, ENSDARG00000111155 263.52 1975.24 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
53. zgc:113413 zgc:113413 259.65 1946.23
54. rpl10a ENSDARG00000042905, ENSDARG00000115649 257.71 1931.69 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
55. fabp2 ENSDARG00000006427, ENSDARG00000110230 248.02 1859.06 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
56. ptmab ENSDARG00000101766 247.05 1851.79 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
57. si:ch211-226o13.2 246.08 1844.51 si:ch211-226o13.2
58. rps27a ENSDARG00000032725, ENSDARG00000114059 243.18 1822.78 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
59. eif5a ENSDARG00000017235 236.39 1771.88 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
60. AL954137.2 ENSDARG00000114408 228.64 1713.79
61. rpl8 ENSDARG00000014867 227.67 1706.52 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
62. zgc:153129 zgc:153129 227.67 1706.52
63. btf3 ENSDARG00000035400, ENSDARG00000116462 223.80 1677.51 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
64. zgc:92533 zgc:92533 223.80 1677.51
65. ttna ttna 221.86 1662.97
66. wu:fa26c03 217.02 1626.69 wu:fa26c03
67. rpl26 ENSDARG00000102317 213.14 1597.61 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
68. rpl21 ENSDARG00000010516, ENSDARG00000110263 208.30 1561.33 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
69. si:dkey-150i13.2 ENSDARG00000071052 208.30 1561.33 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
70. rps23 ENSDARG00000021838 190.86 1430.61 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
71. fth1a ENSDARG00000015551 187.95 1408.80 ferritin, heavy polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-000831-2]
72. rpl23 ENSDARG00000053457 186.01 1394.25 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
73. ttnb ttnb 182.14 1365.25
74. rps26l ENSDARG00000030408 176.33 1321.70 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
75. rpl36a ENSDARG00000058105, ENSDARG00000112656 175.36 1314.43 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
76. myhz1.2 ENSDARG00000067995 171.48 1285.34 myosin, heavy polypeptide 1.2, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-73]
77. wu:fb37b09 wu:fb37b09 171.48 1285.34
78. rps3 ENSDARG00000103007 170.51 1278.07 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
79. CABZ01044814.2 CABZ01044814.2 169.54 1270.80
80. pvalb1 ENSDARG00000037789 169.54 1270.80 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
81. fetub ENSDARG00000053973 168.58 1263.61 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
82. rpl11 ENSDARG00000043509 168.58 1263.61 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
83. si:dkey-269i1.2 si:dkey-269i1.2 168.58 1263.61
84. acta1b ENSDARG00000055618 163.73 1227.25 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
85. gatm ENSDARG00000036239 163.73 1227.25 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
86. rplp1 ENSDARG00000021864 163.73 1227.25 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
87. rpsa ENSDARG00000019181 163.73 1227.25 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
88. rps20 ENSDARG00000036044 161.79 1212.71 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
89. rplp0 ENSDARG00000051783 160.82 1205.44 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
90. si:dkeyp-86f7.3 si:dkeyp-86f7.3 158.89 1190.97
91. he1b 157.92 1183.70 hatching enzyme 1b
92. rps2 ENSDARG00000077291 157.92 1183.70 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
93. hsp90ab1 ENSDARG00000029150 153.07 1147.35 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
94. rps15 ENSDARG00000070849, ENSDARG00000110979 150.17 1125.61 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
95. cfl1 ENSDARG00000021124 149.20 1118.34 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
96. rpl9 ENSDARG00000037350, ENSDARG00000112384 149.20 1118.34 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
97. rpl36 ENSDARG00000100588 148.23 1111.07 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
98. sepp1a 148.23 1111.07 selenoprotein P, plasma, 1a
99. rpl19 ENSDARG00000013307 146.29 1096.53 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
100. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 143.39 1074.79 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA