Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_28hpf_whole2, section s17.

Sample reads: 133,408. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 9549.79 71583.24
2. krt4 ENSDARG00000017624, ENSDARG00000115790 1863.68 13969.76 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. zgc:112425 zgc:112425 1685.55 12634.53
4. tmsb4x ENSDARG00000077777 1430.86 10725.43 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
5. mt-co2 ENSDARG00000063908 1409.56 10565.77 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. hmga1a ENSDARG00000028335 1274.88 9556.24 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
7. mt-nd2 ENSDARG00000063899 980.76 7351.57 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
8. mt-atp6 ENSDARG00000063911 918.89 6887.81 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
9. actb2 ENSDARG00000037870 828.24 6208.31 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
10. ptmab ENSDARG00000101766 823.06 6169.49 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
11. eef1a1l1 ENSDARG00000020850 815.00 6109.07 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
12. mt-nd4 ENSDARG00000063917 812.12 6087.48 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
13. ppiaa ENSDARG00000009212 802.34 6014.17 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
14. mt-co3 ENSDARG00000063912 783.35 5871.83 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
15. si:dkey-151g10.6 si:dkey-151g10.6 749.39 5617.27
16. he1a 642.91 4819.12 hatching enzyme 1a, transcript variant X1
17. eef2b ENSDARG00000100371, ENSDARG00000109247 623.63 4674.60 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
18. AL954137.2 ENSDARG00000114408 620.17 4648.67
19. hspa8 ENSDARG00000068992, ENSDARG00000114726 574.99 4310.01 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
20. pcna ENSDARG00000054155 572.11 4288.42 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
21. mt-nd1 ENSDARG00000063895 570.67 4277.62 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
22. rpl10a ENSDARG00000042905, ENSDARG00000115649 477.72 3580.89 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
23. hsp90ab1 ENSDARG00000029150 462.47 3466.58 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
24. rpl18a ENSDARG00000025073 461.60 3460.06 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
25. actb1 ENSDARG00000037746, ENSDARG00000113649 459.01 3440.64 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
26. cirbp cirbp 428.22 3209.85
27. rpl23 ENSDARG00000053457 424.48 3181.81 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
28. rpl8 ENSDARG00000014867 413.26 3097.71 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
29. rps27a ENSDARG00000032725, ENSDARG00000114059 410.95 3080.40 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
30. mt-cyb ENSDARG00000063924 396.56 2972.53 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
31. rps23 ENSDARG00000021838 393.11 2946.67 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
32. rpl21 ENSDARG00000010516, ENSDARG00000110263 374.41 2806.50 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
33. hmgn2 ENSDARG00000099572 372.39 2791.36 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
34. id1 ENSDARG00000040764 370.38 2776.29 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
35. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 356.85 2674.87 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
36. rplp1 ENSDARG00000021864 346.78 2599.39 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
37. rpl26 ENSDARG00000102317 346.49 2597.22 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
38. hnrnpab hnrnpab 343.61 2575.63
39. zgc:123194 zgc:123194 340.16 2549.77
40. rps20 ENSDARG00000036044 330.66 2478.56 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
41. btf3 ENSDARG00000035400, ENSDARG00000116462 316.27 2370.69 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
42. rpl9 ENSDARG00000037350, ENSDARG00000112384 312.53 2342.66 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
43. rpl19 ENSDARG00000013307 303.61 2275.80 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
44. ctslb ENSDARG00000039173, ENSDARG00000074306 302.75 2269.35 cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
45. h3f3a 300.73 2254.21 H3 histone, family 3A, transcript variant X1
46. zgc:174855 ENSDARG00000094559 299.58 2245.59 zgc:174855 [Source:ZFIN;Acc:ZDB-GENE-071004-74]
47. rps26l ENSDARG00000030408 298.72 2239.14 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
48. rpl36a ENSDARG00000058105, ENSDARG00000112656 297.57 2230.52 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
49. mt-co1 ENSDARG00000063905 295.55 2215.38 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
50. rpl6 ENSDARG00000058451 293.54 2200.31 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
51. eif5a ENSDARG00000017235 284.33 2131.28 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
52. cfl1 ENSDARG00000021124 283.47 2124.83 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
53. ran ENSDARG00000057026 271.67 2036.38 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
54. si:dkeyp-86f7.3 si:dkeyp-86f7.3 270.80 2029.86
55. rps15 ENSDARG00000070849, ENSDARG00000110979 269.94 2023.41 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
56. hbbe3 ENSDARG00000038147, ENSDARG00000109344 262.17 1965.17 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
57. rps2 ENSDARG00000077291 259.29 1943.58 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
58. rpl36 ENSDARG00000100588 256.41 1922.00 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
59. rps9 ENSDARG00000011405, ENSDARG00000113248 256.13 1919.90 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
60. khdrbs1a ENSDARG00000052856 255.26 1913.38 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
61. si:dkey-269i1.3 249.22 1868.10 si:dkey-269i1.3
62. tuba8l4 ENSDARG00000006260 246.63 1848.69 tubulin, alpha 8 like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-860]
63. rpsa ENSDARG00000019181 242.03 1814.21 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
64. rps14 ENSDARG00000036629 240.59 1803.41 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
65. eif5a2 ENSDARG00000056186 237.42 1779.65 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
66. h3f3d ENSDARG00000045248 234.26 1755.96 H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
67. rps15a ENSDARG00000010160 233.97 1753.79 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
68. hnrnpa0a ENSDARG00000089302 233.10 1747.27 heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
69. rps29 ENSDARG00000041232 230.80 1730.03 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
70. faua ENSDARG00000099022 229.65 1721.41 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
71. rpl11 ENSDARG00000043509 228.21 1710.61 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
72. pabpc1a ENSDARG00000017219 226.49 1697.72 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
73. rpl27 ENSDARG00000015128 223.61 1676.13 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
74. marcksb ENSDARG00000008803 222.46 1667.51 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
75. RPL29 ENSDARG00000077717 221.31 1658.89 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
76. rpl18 ENSDARG00000029533 220.73 1654.55 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
77. rps12 ENSDARG00000036875, ENSDARG00000115157 220.73 1654.55 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
78. fkbp1aa ENSDARG00000022684 219.29 1643.75 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
79. apoa1b ENSDARG00000101324 217.85 1632.96 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
80. rps4x ENSDARG00000014690 216.99 1626.51 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
81. si:ch1073-429i10.3 215.84 1617.89 si:ch1073-429i10.3, transcript variant X2
82. rpl35a ENSDARG00000088030 212.10 1589.86 ribosomal protein L35a [Source:ZFIN;Acc:ZDB-GENE-040718-190]
83. rplp2l ENSDARG00000011201 211.81 1587.68 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
84. rps6 ENSDARG00000019778 210.94 1581.16 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
85. rps27.1 ENSDARG00000023298 209.79 1572.54 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
86. rps3 ENSDARG00000103007 207.78 1557.48 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
87. rps5 ENSDARG00000043453 207.78 1557.48 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
88. fabp3 ENSDARG00000023290 206.92 1551.03 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
89. rplp0 ENSDARG00000051783 206.92 1551.03 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
90. hbae3 ENSDARG00000079305 203.46 1525.09 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
91. top1l ENSDARG00000070545 201.74 1512.20 DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
92. zgc:161979 zgc:161979 198.86 1490.61
93. ddx5 ENSDARG00000038068 198.57 1488.44 DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
94. rpl35 ENSDARG00000018334 197.42 1479.82 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
95. tuba8l ENSDARG00000042708 197.13 1477.65 tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
96. seta ENSDARG00000031495 194.54 1458.23 SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
97. ccnd1 ENSDARG00000101637 193.68 1451.79 cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
98. rpl15 ENSDARG00000009285 190.80 1430.20 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
99. rpl39 ENSDARG00000036316, ENSDARG00000117167 190.51 1428.02 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
100. wu:fa26c03 188.50 1412.96 wu:fa26c03
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA