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Experiment Zebrafish_28hpf_whole2, section s15.

Sample reads: 133,396. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 11662.23 87426.29
2. mt-co2 ENSDARG00000063908 1476.86 11071.33 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
3. hmga1a ENSDARG00000028335 1389.53 10416.66 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
4. zgc:112425 zgc:112425 1381.70 10357.96
5. tmsb4x ENSDARG00000077777 1260.33 9448.11 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
6. krt4 ENSDARG00000017624, ENSDARG00000115790 1113.37 8346.41 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
7. mt-nd2 ENSDARG00000063899 1096.20 8217.70 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
8. mt-atp6 ENSDARG00000063911 927.26 6951.24 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
9. ptmab ENSDARG00000101766 843.23 6321.30 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
10. eef1a1l1 ENSDARG00000020850 808.60 6061.70 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
11. ppiaa ENSDARG00000009212 804.08 6027.81 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
12. si:dkey-151g10.6 si:dkey-151g10.6 791.74 5935.30
13. mt-co3 ENSDARG00000063912 770.66 5777.28 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
14. actb2 ENSDARG00000037870 750.48 5626.00 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
15. AL954137.2 ENSDARG00000114408 667.66 5005.14
16. pcna ENSDARG00000054155 653.21 4896.81 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
17. hspa8 ENSDARG00000068992, ENSDARG00000114726 622.49 4666.52 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
18. eef2b ENSDARG00000100371, ENSDARG00000109247 620.08 4648.45 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
19. mt-nd4 ENSDARG00000063917 586.95 4400.09 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
20. mt-nd1 ENSDARG00000063895 550.21 4124.67 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
21. rpl23 ENSDARG00000053457 506.84 3799.54 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
22. rpl10a ENSDARG00000042905, ENSDARG00000115649 502.63 3767.98 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
23. hmgn2 ENSDARG00000099572 474.92 3560.25 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
24. cirbp cirbp 438.78 3289.33
25. mt-cyb ENSDARG00000063924 437.28 3278.08 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
26. actb1 ENSDARG00000037746, ENSDARG00000113649 429.75 3221.63 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
27. hsp90ab1 ENSDARG00000029150 425.83 3192.25 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
28. rpl8 ENSDARG00000014867 421.01 3156.12 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
29. rpl18a ENSDARG00000025073 396.92 2975.52 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
30. rps27a ENSDARG00000032725, ENSDARG00000114059 393.61 2950.71 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
31. rplp1 ENSDARG00000021864 390.00 2923.65 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
32. rps23 ENSDARG00000021838 390.00 2923.65 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
33. id1 ENSDARG00000040764 388.79 2914.58 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
34. rpl21 ENSDARG00000010516, ENSDARG00000110263 388.79 2914.58 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
35. zgc:123194 zgc:123194 373.13 2797.18
36. rpl26 ENSDARG00000102317 371.63 2785.94 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
37. hnrnpab hnrnpab 371.32 2783.61
38. rps26l ENSDARG00000030408 368.01 2758.80 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
39. rpl36a ENSDARG00000058105, ENSDARG00000112656 349.94 2623.34 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
40. rpl9 ENSDARG00000037350, ENSDARG00000112384 335.49 2515.01 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
41. h3f3a 334.88 2510.44 H3 histone, family 3A, transcript variant X1
42. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 333.38 2499.19 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
43. ran ENSDARG00000057026 331.87 2487.87 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
44. cfl1 ENSDARG00000021124 330.07 2474.38 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
45. btf3 ENSDARG00000035400, ENSDARG00000116462 322.54 2417.93 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
46. rps20 ENSDARG00000036044 300.85 2255.33 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
47. rps15 ENSDARG00000070849, ENSDARG00000110979 298.75 2239.59 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
48. rps15a ENSDARG00000010160 298.14 2235.02 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
49. khdrbs1a ENSDARG00000052856 295.43 2214.70 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
50. si:dkeyp-86f7.3 si:dkeyp-86f7.3 295.43 2214.70
51. rpl19 ENSDARG00000013307 280.07 2099.55 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
52. eif5a ENSDARG00000017235 279.77 2097.30 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
53. marcksb ENSDARG00000008803 276.16 2070.24 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
54. rps2 ENSDARG00000077291 276.16 2070.24 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
55. pabpc1a ENSDARG00000017219 270.14 2025.11 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
56. rpl6 ENSDARG00000058451 268.93 2016.04 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
57. rpl27 ENSDARG00000015128 268.33 2011.54 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
58. rps14 ENSDARG00000036629 263.81 1977.66 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
59. rpl36 ENSDARG00000100588 251.77 1887.40 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
60. rpl11 ENSDARG00000043509 250.56 1878.33 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
61. hnrnpa0a ENSDARG00000089302 246.34 1846.70 heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
62. si:ch1073-429i10.3 245.74 1842.20 si:ch1073-429i10.3, transcript variant X2
63. rps9 ENSDARG00000011405, ENSDARG00000113248 241.83 1812.89 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
64. mt-co1 ENSDARG00000063905 241.53 1810.64 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
65. fkbp1aa ENSDARG00000022684 238.82 1790.32 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
66. eif5a2 ENSDARG00000056186 236.71 1774.50 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
67. rps12 ENSDARG00000036875, ENSDARG00000115157 235.80 1767.68 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
68. rpl18 ENSDARG00000029533 235.50 1765.43 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
69. rps29 ENSDARG00000041232 231.59 1736.12 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
70. tuba8l4 ENSDARG00000006260 230.68 1729.30 tubulin, alpha 8 like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-860]
71. rps27.1 ENSDARG00000023298 227.07 1702.24 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
72. rps5 ENSDARG00000043453 224.06 1679.67 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
73. rpl5b ENSDARG00000015862, ENSDARG00000109661 223.76 1677.42 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
74. ccnd1 ENSDARG00000101637 222.55 1668.35 cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
75. faua ENSDARG00000099022 222.25 1666.10 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
76. top1l ENSDARG00000070545 221.65 1661.61 DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
77. rps6 ENSDARG00000019778 217.74 1632.30 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
78. fabp3 ENSDARG00000023290 217.43 1629.97 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
79. rpsa ENSDARG00000019181 215.93 1618.73 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
80. RPL29 ENSDARG00000077717 214.72 1609.66 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
81. rpl7 ENSDARG00000007320 213.22 1598.41 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
82. rplp2l ENSDARG00000011201 212.31 1591.59 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
83. tuba8l ENSDARG00000042708 209.30 1569.02 tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
84. rps4x ENSDARG00000014690 202.38 1517.15 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
85. seta ENSDARG00000031495 201.17 1508.08 SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
86. rps19 ENSDARG00000030602 198.76 1490.01 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
87. ddx5 ENSDARG00000038068 198.16 1485.51 DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
88. rpl39 ENSDARG00000036316, ENSDARG00000117167 194.25 1456.20 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
89. pnrc2 ENSDARG00000053291, ENSDARG00000112537 193.64 1451.63 proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
90. h3f3d ENSDARG00000045248 193.34 1449.38 H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
91. rpl15 ENSDARG00000009285 188.52 1413.25 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
92. rpl14 ENSDARG00000103433 185.51 1390.68 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
93. ptmaa ENSDARG00000021113, ENSDARG00000110479 180.99 1356.80 prothymosin alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-7647]
94. rplp0 ENSDARG00000051783 180.69 1354.55 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
95. rps3 ENSDARG00000103007 176.48 1322.99 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
96. rpl35 ENSDARG00000018334 174.37 1307.17 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
97. rpl31 ENSDARG00000053365 173.77 1302.67 ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
98. rps24 ENSDARG00000039347 171.06 1282.36 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
99. rps3a ENSDARG00000035692, ENSDARG00000114628, ENSDARG00000115378 171.06 1282.36 ribosomal protein S3A [Source:ZFIN;Acc:ZDB-GENE-030131-9184]
100. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 170.75 1280.03 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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