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Experiment Zebrafish_28hpf_whole2, section s12.

Sample reads: 133,413. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 8325.57 62404.87
2. zgc:112425 zgc:112425 1864.46 13975.18
3. hmga1a ENSDARG00000028335 1551.65 11630.50 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
4. mt-co2 ENSDARG00000063908 1487.07 11146.43 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. krt4 ENSDARG00000017624, ENSDARG00000115790 1476.10 11064.21 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
6. tmsb4x ENSDARG00000077777 1103.74 8273.16 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
7. ppiaa ENSDARG00000009212 996.54 7469.63 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
8. mt-atp6 ENSDARG00000063911 994.20 7452.09 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
9. ptmab ENSDARG00000101766 984.84 7381.93 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
10. mt-nd2 ENSDARG00000063899 960.92 7202.64 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
11. mt-nd4 ENSDARG00000063917 831.23 6230.54 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
12. eef1a1l1 ENSDARG00000020850 816.48 6119.98 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
13. si:dkey-151g10.6 si:dkey-151g10.6 793.09 5944.66
14. actb2 ENSDARG00000037870 777.26 5826.00 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
15. mt-co3 ENSDARG00000063912 724.20 5428.29 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
16. eef2b ENSDARG00000100371, ENSDARG00000109247 640.91 4803.98 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
17. AL954137.2 ENSDARG00000114408 639.11 4790.49
18. pcna ENSDARG00000054155 602.24 4514.13 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
19. hspa8 ENSDARG00000068992, ENSDARG00000114726 548.27 4109.59 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
20. mt-nd1 ENSDARG00000063895 543.78 4075.94 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
21. id1 ENSDARG00000040764 525.61 3939.74 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
22. rpl10a ENSDARG00000042905, ENSDARG00000115649 524.71 3933.00 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
23. cirbp cirbp 509.60 3819.74
24. hsp90ab1 ENSDARG00000029150 504.56 3781.96 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
25. hmgn2 ENSDARG00000099572 468.77 3513.70 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
26. rpl23 ENSDARG00000053457 454.38 3405.84 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
27. actb1 ENSDARG00000037746, ENSDARG00000113649 449.88 3372.11 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
28. mt-cyb ENSDARG00000063924 433.69 3250.75 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
29. rps27a ENSDARG00000032725, ENSDARG00000114059 428.11 3208.93 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
30. rpl8 ENSDARG00000014867 427.76 3206.30 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
31. rpl18a ENSDARG00000025073 412.29 3090.35 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
32. hnrnpab hnrnpab 412.11 3089.00
33. zgc:123194 zgc:123194 409.95 3072.81
34. rps26l ENSDARG00000030408 405.99 3043.13 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
35. rps23 ENSDARG00000021838 389.62 2920.42 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
36. rpl21 ENSDARG00000010516, ENSDARG00000110263 387.82 2906.93 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
37. rpl26 ENSDARG00000102317 380.09 2848.99 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
38. cfl1 ENSDARG00000021124 361.38 2708.75 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
39. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 353.82 2652.08 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
40. rpl36a ENSDARG00000058105, ENSDARG00000112656 352.75 2644.06 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
41. rplp1 ENSDARG00000021864 344.65 2583.35 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
42. h3f3a 344.47 2582.00 H3 histone, family 3A, transcript variant X1
43. pabpc1a ENSDARG00000017219 339.79 2546.92 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
44. khdrbs1a ENSDARG00000052856 328.10 2459.30 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
45. fabp3 ENSDARG00000023290 327.56 2455.25 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
46. rps20 ENSDARG00000036044 324.68 2433.66 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
47. btf3 ENSDARG00000035400, ENSDARG00000116462 324.32 2430.96 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
48. si:dkeyp-86f7.3 si:dkeyp-86f7.3 323.06 2421.52
49. ran ENSDARG00000057026 317.31 2378.42 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
50. rpl36 ENSDARG00000100588 313.35 2348.74 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
51. eif5a ENSDARG00000017235 312.63 2343.34 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
52. rps14 ENSDARG00000036629 297.88 2232.78 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
53. rpl9 ENSDARG00000037350, ENSDARG00000112384 284.93 2135.71 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
54. rps15 ENSDARG00000070849, ENSDARG00000110979 280.97 2106.03 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
55. rps29 ENSDARG00000041232 277.56 2080.47 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
56. mt-co1 ENSDARG00000063905 277.02 2076.42 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
57. eif5a2 ENSDARG00000056186 273.96 2053.49 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
58. rpsa ENSDARG00000019181 273.78 2052.14 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
59. marcksb ENSDARG00000008803 270.54 2027.85 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
60. hnrnpa0a ENSDARG00000089302 268.38 2011.66 heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
61. h3f3d ENSDARG00000045248 264.42 1981.98 H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
62. rps5 ENSDARG00000043453 261.55 1960.47 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
63. rpl19 ENSDARG00000013307 259.39 1944.28 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
64. rpl27 ENSDARG00000015128 258.85 1940.23 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
65. rps9 ENSDARG00000011405, ENSDARG00000113248 257.95 1933.48 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
66. tuba8l4 ENSDARG00000006260 257.41 1929.43 tubulin, alpha 8 like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-860]
67. rps2 ENSDARG00000077291 251.29 1883.56 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
68. rpl6 ENSDARG00000058451 250.21 1875.47 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
69. rps27.1 ENSDARG00000023298 245.72 1841.81 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
70. rpl11 ENSDARG00000043509 243.56 1825.62 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
71. tuba8l ENSDARG00000042708 240.86 1805.38 tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
72. seta ENSDARG00000031495 235.82 1767.60 SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
73. rpl18 ENSDARG00000029533 235.10 1762.21 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
74. fkbp1aa ENSDARG00000022684 234.56 1758.16 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
75. RPL29 ENSDARG00000077717 233.30 1748.72 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
76. rps15a ENSDARG00000010160 232.59 1743.39 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
77. si:ch1073-429i10.3 231.33 1733.95 si:ch1073-429i10.3, transcript variant X2
78. rps6 ENSDARG00000019778 224.31 1681.33 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
79. rplp2l ENSDARG00000011201 222.87 1670.54 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
80. rps12 ENSDARG00000036875, ENSDARG00000115157 220.89 1655.70 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
81. rps19 ENSDARG00000030602 220.89 1655.70 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
82. top1l ENSDARG00000070545 215.32 1613.95 DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
83. ddx5 ENSDARG00000038068 211.00 1581.56 DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
84. pnrc2 ENSDARG00000053291, ENSDARG00000112537 208.84 1565.37 proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
85. rpl39 ENSDARG00000036316, ENSDARG00000117167 206.32 1546.49 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
86. rpl5b ENSDARG00000015862, ENSDARG00000109661 205.42 1539.74 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
87. rplp0 ENSDARG00000051783 201.65 1511.48 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
88. rps4x ENSDARG00000014690 200.75 1504.74 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
89. rpl15 ENSDARG00000009285 196.25 1471.01 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
90. faua ENSDARG00000099022 194.27 1456.16 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
91. pbx4 ENSDARG00000052150 194.27 1456.16 pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
92. rpl7 ENSDARG00000007320 186.90 1400.92 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
93. rps3 ENSDARG00000103007 186.00 1394.18 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
94. rpl14 ENSDARG00000103433 185.64 1391.48 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
95. zgc:92533 zgc:92533 172.68 1294.33
96. syncrip ENSDARG00000040184 172.51 1293.06 synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
97. ccnd1 ENSDARG00000101637 171.25 1283.62 cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
98. rps13 ENSDARG00000036298, ENSDARG00000112818 169.99 1274.17 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
99. prtgb ENSDARG00000040442 168.73 1264.73 protogenin homolog b (Gallus gallus) [Source:ZFIN;Acc:ZDB-GENE-060302-1]
100. rpl24 ENSDARG00000099104 168.55 1263.38 ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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