Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole1, section s69.

Sample reads: 133,402. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 19556.37 146597.15
2. eef1a1l1 ENSDARG00000020850 3841.43 28795.87 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
3. krt4 ENSDARG00000017624, ENSDARG00000115790 2793.77 20942.47 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
4. mt-atp6 ENSDARG00000063911 2095.33 15706.87 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
5. apoc1l apoc1l 1746.10 13089.00
6. rps15a ENSDARG00000010160 1396.88 10471.20 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
7. tmsb4x ENSDARG00000077777 1396.88 10471.20 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
8. actb2 ENSDARG00000037870 1047.66 7853.40 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
9. apobb apobb 1047.66 7853.40
10. elavl3 ENSDARG00000014420 1047.66 7853.40 ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
11. hmga1a ENSDARG00000028335 1047.66 7853.40 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
12. mt-nd2 ENSDARG00000063899 1047.66 7853.40 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
13. rplp1 ENSDARG00000021864 1047.66 7853.40 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
14. si:dkey-151g10.6 si:dkey-151g10.6 1047.66 7853.40
15. tuba8l ENSDARG00000042708 1047.66 7853.40 tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
16. zgc:112425 zgc:112425 1047.66 7853.40
17. AL954137.2 ENSDARG00000114408 698.44 5235.60
18. actb1 ENSDARG00000037746, ENSDARG00000113649 698.44 5235.60 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
19. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 698.44 5235.60 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
20. banf1 ENSDARG00000037009 698.44 5235.60 barrier to autointegration factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6657]
21. cdv3 ENSDARG00000023028 698.44 5235.60 carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
22. cfl1l ENSDARG00000012972 698.44 5235.60 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
23. col1a1a ENSDARG00000012405, ENSDARG00000116113 698.44 5235.60 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
24. eef2b ENSDARG00000100371, ENSDARG00000109247 698.44 5235.60 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
25. eif5a2 ENSDARG00000056186 698.44 5235.60 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
26. hnrnpua ENSDARG00000015206 698.44 5235.60 heterogeneous nuclear ribonucleoprotein Ua [Source:ZFIN;Acc:ZDB-GENE-030131-3731]
27. hoxc13a ENSDARG00000070353 698.44 5235.60 homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
28. hsp90aa1.1 ENSDARG00000010478 698.44 5235.60 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
29. jph2 ENSDARG00000028625 698.44 5235.60 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
30. med23 ENSDARG00000029157 698.44 5235.60 mediator complex subunit 23 [Source:ZFIN;Acc:ZDB-GENE-040724-82]
31. mt-nd4 ENSDARG00000063917 698.44 5235.60 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
32. pabpc1a ENSDARG00000017219 698.44 5235.60 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
33. pdhb ENSDARG00000021346 698.44 5235.60 pyruvate dehydrogenase E1 beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2173]
34. rpl10a ENSDARG00000042905, ENSDARG00000115649 698.44 5235.60 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
35. rpl11 ENSDARG00000043509 698.44 5235.60 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
36. rpl18a ENSDARG00000025073 698.44 5235.60 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
37. rpl36a ENSDARG00000058105, ENSDARG00000112656 698.44 5235.60 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
38. rps18 ENSDARG00000100392 698.44 5235.60 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
39. taf1b ENSDARG00000028937 698.44 5235.60 TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
40. tardbpl ENSDARG00000004452, ENSDARG00000116205 698.44 5235.60 TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
41. zgc:161979_1 zgc:161979_1 698.44 5235.60
42. zgc:66286 zgc:66286 698.44 5235.60
43. ACVR2B 349.22 2617.80 activin A receptor, type IIB
44. APOB APOB 349.22 2617.80
45. ATOX1 ENSDARG00000087693 349.22 2617.80 antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
46. BX511252.1 BX511252.1 349.22 2617.80
47. C19H1orf85 C19H1orf85 349.22 2617.80
48. C3H19orf43 C3H19orf43 349.22 2617.80
49. CABZ01013938.1 CABZ01013938.1 349.22 2617.80
50. CABZ01044814.2 CABZ01044814.2 349.22 2617.80
51. CU638868.1 ENSDARG00000115797 349.22 2617.80 transmembrane protein 26a [Source:NCBI gene;Acc:794507]
52. GPALPP1 ENSDARG00000058287 349.22 2617.80 GPALPP motifs containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-212]
53. LPL_1 LPL_1 349.22 2617.80
54. MON2 ENSDARG00000099798 349.22 2617.80 MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:ZFIN;Acc:ZDB-GENE-030131-2712]
55. MRPL21 ENSDARG00000003846 349.22 2617.80 mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
56. NDNF ENSDARG00000062936 349.22 2617.80 neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
57. PEG3_5 PEG3_5 349.22 2617.80
58. PHLDB1 PHLDB1 349.22 2617.80
59. PKP3 PKP3 349.22 2617.80
60. PLEKHA6 ENSDARG00000020328 349.22 2617.80 pleckstrin homology domain containing, family A member 6 [Source:ZFIN;Acc:ZDB-GENE-140106-14]
61. RPL29 ENSDARG00000077717 349.22 2617.80 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
62. TACC2 349.22 2617.80 transforming, acidic coiled-coil containing protein 2, transcript variant X17
63. UBE2QL1 ENSDARG00000079276 349.22 2617.80 ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
64. a2ml ENSDARG00000056314 349.22 2617.80 alpha-2-macroglobulin-like [Source:ZFIN;Acc:ZDB-GENE-090212-1]
65. abi1b ENSDARG00000062991 349.22 2617.80 abl-interactor 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1182]
66. acox1 ENSDARG00000014727 349.22 2617.80 acyl-CoA oxidase 1, palmitoyl [Source:ZFIN;Acc:ZDB-GENE-041010-219]
67. actc1b ENSDARG00000099197 349.22 2617.80 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
68. and1 ENSDARG00000088514 349.22 2617.80 actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
69. atf7ip ENSDARG00000069619 349.22 2617.80 activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
70. atp5a1 349.22 2617.80 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
71. atp6v1ba ENSDARG00000013443, ENSDARG00000111525 349.22 2617.80 ATPase, H+ transporting, lysosomal, V1 subunit B, member a [Source:ZFIN;Acc:ZDB-GENE-030711-3]
72. atpaf1 ENSDARG00000042799 349.22 2617.80 ATP synthase mitochondrial F1 complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-030219-10]
73. bcar1 ENSDARG00000056525 349.22 2617.80 BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
74. bre bre 349.22 2617.80
75. brms1la ENSDARG00000006235 349.22 2617.80 BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
76. btbd10b ENSDARG00000020252 349.22 2617.80 BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
77. btg1 ENSDARG00000027249 349.22 2617.80 B-cell translocation gene 1, anti-proliferative [Source:ZFIN;Acc:ZDB-GENE-010726-1]
78. bysl ENSDARG00000001057 349.22 2617.80 bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]
79. c8b ENSDARG00000039517 349.22 2617.80 complement component 8, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-070912-163]
80. calm3a_1 ENSDARG00000015050, ENSDARG00000100825 349.22 2617.80 calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
81. calr ENSDARG00000076290 349.22 2617.80 calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
82. capn9 ENSDARG00000012341 349.22 2617.80 calpain 9 [Source:ZFIN;Acc:ZDB-GENE-010724-2]
83. cct4 ENSDARG00000013475 349.22 2617.80 chaperonin containing TCP1, subunit 4 (delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1421]
84. cd81 cd81 349.22 2617.80
85. cdkn1c cdkn1c 349.22 2617.80
86. chd4a ENSDARG00000063535, ENSDARG00000111791 349.22 2617.80 chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
87. chmp4b chmp4b 349.22 2617.80
88. cirbp cirbp 349.22 2617.80
89. ck2b ck2b 349.22 2617.80
90. ckma ENSDARG00000035327, ENSDARG00000114671 349.22 2617.80 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
91. coa5 ENSDARG00000094833 349.22 2617.80 cytochrome C oxidase assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-060825-53]
92. col2a1a ENSDARG00000069093, ENSDARG00000111202 349.22 2617.80 collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
93. cope ENSDARG00000018562 349.22 2617.80 coatomer protein complex, subunit epsilon [Source:ZFIN;Acc:ZDB-GENE-041114-59]
94. cox4i1 ENSDARG00000032970 349.22 2617.80 cytochrome c oxidase subunit 4I1 [Source:ZFIN;Acc:ZDB-GENE-030131-5175]
95. cycsb ENSDARG00000044562 349.22 2617.80 cytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
96. cyt1l ENSDARG00000036832 349.22 2617.80 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
97. dbi ENSDARG00000026369 349.22 2617.80 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
98. derl1 ENSDARG00000021905 349.22 2617.80 derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
99. dhx38 ENSDARG00000100013 349.22 2617.80 DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Source:ZFIN;Acc:ZDB-GENE-040426-1144]
100. dld ENSDARG00000020219 349.22 2617.80 deltaD [Source:ZFIN;Acc:ZDB-GENE-990415-47]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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