Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for taf1b

Gene Name Gene ID Reads Annotation
taf1b ENSDARG00000028937 879 TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]










Genes with expression patterns similar to taf1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. taf1b ENSDARG00000028937 879 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
2. si:ch211-59m15.1 87 2.615 - 0.727 - 0.975 - 0.913 - - - si:ch211-59m15.1
3. suv420h2 2186 1.94 - - 0.999 0.941 - - - - - suppressor of variegation 4-20 homolog 2 (Drosophila)
4. BX537137.1 ENSDARG00000092436 77 1.844 - - - - - 0.915 0.929 - - gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466]
5. DIP2C DIP2C 222 1.842 - - - 0.975 - 0.867 - - -
6. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 1.838 - - - 0.960 - 0.878 - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
7. C19H1orf85 C19H1orf85 1587 1.823 - - 0.999 0.824 - - - - -
8. GPALPP1 ENSDARG00000058287 1858 1.804 - - 0.933 0.871 - - - - - GPALPP motifs containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-212]
9. pum2 ENSDARG00000061040 207 1.803 - - - - - 0.895 0.908 - - pumilio RNA-binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-081031-76]
10. hoxc13a ENSDARG00000070353 4815 1.785 - - 0.908 - - 0.877 - - - homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
11. CABZ01054394.3 CABZ01054394.3 60 1.785 - 0.896 - - - - 0.889 - -
12. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.781 - - 0.999 0.782 - - - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
13. rapgef5a ENSDARG00000075271 282 1.757 - - - 0.977 - 0.780 - - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
14. eef1a1a ENSDARG00000039502 234 1.752 0.771 - - 0.981 - - - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
15. sephs1 ENSDARG00000058292 3347 1.747 - - 0.928 0.819 - - - - - selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
16. pip5k1aa ENSDARG00000100396 1644 1.728 - - 0.998 0.730 - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a [Source:ZFIN;Acc:ZDB-GENE-050522-517]
17. anapc1 ENSDARG00000075687 488 1.669 - - - 0.803 - 0.866 - - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
18. ACVR2B 6615 1.664 - 0.737 0.927 - - - - - - activin A receptor, type IIB
19. crygm2d3 ENSDARG00000088823 1560 1.661 - 0.707 - - - 0.954 - - - crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2]
20. psmf1 ENSDARG00000022652 527 1.659 - - - 0.916 - 0.743 - - - proteasome inhibitor subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040718-282]
21. igbp1 ENSDARG00000002184, ENSDARG00000117141 879 1.652 - 0.759 - 0.893 - - - - - immunoglobulin (CD79A) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2928]
22. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1.63 - - - - - 0.867 - 0.763 - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
23. LRRC16B 84 1.628 - - - - - 0.819 - 0.809 - leucine rich repeat containing 16B, transcript variant X2
24. SNCAIP ENSDARG00000100198 522 1.618 - - - 0.857 - 0.761 - - - synuclein, alpha interacting protein [Source:ZFIN;Acc:ZDB-GENE-080204-71]
25. LDLRAD4 LDLRAD4 1237 1.604 - 0.716 - 0.888 - - - - -
26. lzic ENSDARG00000055899 638 1.603 - 0.743 - 0.860 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
27. scyl3 ENSDARG00000027046 643 1.59 - - - 0.847 - 0.743 - - - SCY1-like, kinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2559]
28. epha7 ENSDARG00000004635, ENSDARG00000112305 1373 1.586 - - - 0.840 - - 0.746 - - eph receptor A7 [Source:ZFIN;Acc:ZDB-GENE-030131-3745]
29. hsdl1 ENSDARG00000041736 171 1.585 0.771 - - - - 0.814 - - - hydroxysteroid dehydrogenase like 1 [Source:ZFIN;Acc:ZDB-GENE-041212-31]
30. ythdf3 ENSDARG00000057939 475 1.58 - - - 0.873 - 0.707 - - - YTH N(6)-methyladenosine RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6123]
31. CABZ01038313.1 CABZ01038313.1 79 1.573 - - - - - - 0.720 0.853 -
32. RNASEH2C ENSDARG00000089637 1673 1.571 - - - 0.832 - 0.739 - - - ribonuclease H2, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2469]
33. CT025910.1 CT025910.1 143 1.556 0.752 - - - - - 0.804 - -
34. si:dkey-14d8.6 ENSDARG00000045835 72 1.536 - - - - - - 0.789 0.747 - si:dkey-14d8.6 [Source:ZFIN;Acc:ZDB-GENE-041210-124]
35. wdr55 ENSDARG00000007217 196 1.521 - 0.812 - - - - 0.709 - - WD repeat domain 55 [Source:ZFIN;Acc:ZDB-GENE-040924-7]
36. CU638738.1 CU638738.1 131 1.516 - 0.702 - - - - 0.814 - -
37. adrb2a ENSDARG00000088124 324 1.512 - 0.781 - - - 0.731 - - - adrenoceptor beta 2, surface a [Source:ZFIN;Acc:ZDB-GENE-100414-3]
38. DHRS7C DHRS7C 363 1.497 - - - 0.796 - - 0.701 - -
39. lrata ENSDARG00000037278, ENSDARG00000112503 1510 1.496 - - - 0.768 - 0.728 - - - lecithin retinol acyltransferase a [Source:ZFIN;Acc:ZDB-GENE-060720-1]
40. spint1b ENSDARG00000012467 97 1.466 0.726 - - - - 0.740 - - - serine peptidase inhibitor, Kunitz type 1 b [Source:ZFIN;Acc:ZDB-GENE-071218-1]
41. trim36 ENSDARG00000062794 785 1 - - 1.000 - - - - - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
42. CU638868.1 ENSDARG00000115797 487 1 - - 1.000 - - - - - - transmembrane protein 26a [Source:NCBI gene;Acc:794507]
43. eaf1 ENSDARG00000070795, ENSDARG00000113962 834 1 - - 1.000 - - - - - - ELL associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-109]
44. hoxb1a ENSDARG00000008174 462 1 - - - - - - 1.000 - - homeobox B1a [Source:ZFIN;Acc:ZDB-GENE-990415-101]
45. LPL_1 LPL_1 1150 1 - - 1.000 - - - - - -
46. fam102aa ENSDARG00000102566 903 1 - - 1.000 - - - - - - family with sequence similarity 102, member Aa [Source:ZFIN;Acc:ZDB-GENE-081104-233]
47. PKP3 PKP3 391 1 - - 1.000 - - - - - -
48. si:ch73-303g23.4 si:ch73-303g23.4 386 1 - - 1.000 - - - - - -
49. acox1 ENSDARG00000014727 660 1 - - 1.000 - - - - - - acyl-CoA oxidase 1, palmitoyl [Source:ZFIN;Acc:ZDB-GENE-041010-219]
50. zgc:195282 ENSDARG00000079488 475 1 - - 1.000 - - - - - - zgc:195282 [Source:ZFIN;Acc:ZDB-GENE-081022-208]
51. si:ch73-7i4.1 ENSDARG00000094554 771 1 - - 1.000 - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
52. pih1d2 ENSDARG00000014849 389 1 - - 1.000 - - - - - - PIH1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041212-54]
53. kifc3 ENSDARG00000054978 1220 0.999 - - 0.999 - - - - - - kinesin family member C3 [Source:ZFIN;Acc:ZDB-GENE-030131-3724]
54. ck2b ck2b 781 0.999 - - 0.999 - - - - - -
55. mfsd11 ENSDARG00000102828 1043 0.999 - - 0.999 - - - - - - major facilitator superfamily domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-050913-140]
56. PEG3_5 PEG3_5 1624 0.999 - - 0.999 - - - - - -
57. si:ch211-209n20.57 si:ch211-209n20.57 1188 0.999 - - 0.999 - - - - - -
58. tmem223 ENSDARG00000069494 1528 0.999 - - 0.999 - - - - - - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
59. si:dkey-57a22.11 ENSDARG00000092651 660 0.999 - - 0.999 - - - - - - si:dkey-57a22.11 [Source:ZFIN;Acc:ZDB-GENE-081104-423]
60. si:dkey-94l16.4 ENSDARG00000090142 791 0.999 - - 0.999 - - - - - - si:dkey-94l16.4 [Source:ZFIN;Acc:ZDB-GENE-121214-291]
61. atpaf1 ENSDARG00000042799 1309 0.999 - - 0.999 - - - - - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-030219-10]
62. abi1b ENSDARG00000062991 1564 0.998 - - 0.998 - - - - - - abl-interactor 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1182]
63. bre bre 1233 0.998 - - 0.998 - - - - - -
64. exoc5 ENSDARG00000060323 2450 0.998 - - 0.998 - - - - - - exocyst complex component 5 [Source:ZFIN;Acc:ZDB-GENE-080204-126]
65. TACC2 1702 0.998 - - 0.998 - - - - - - transforming, acidic coiled-coil containing protein 2, transcript variant X17
66. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 0.998 - - 0.998 - - - - - - integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
67. dlg1l ENSDARG00000102216 1960 0.998 - - 0.998 - - - - - - discs, large (Drosophila) homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-050222-3]
68. usp44 ENSDARG00000089861 1532 0.998 - - 0.998 - - - - - - ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]
69. numb ENSDARG00000027279 2905 0.997 - - 0.997 - - - - - - numb homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060422-1]
70. dhx38 ENSDARG00000100013 1854 0.997 - - 0.997 - - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Source:ZFIN;Acc:ZDB-GENE-040426-1144]
71. sp3b ENSDARG00000007812 2928 0.997 - - 0.997 - - - - - - Sp3b transcription factor [Source:ZFIN;Acc:ZDB-GENE-110815-3]
72. brms1la ENSDARG00000006235 2011 0.997 - - 0.997 - - - - - - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
73. jph2 ENSDARG00000028625 6706 0.997 - - 0.997 - - - - - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
74. fosl2 ENSDARG00000040623 2041 0.997 - - 0.997 - - - - - - fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]
75. nat9 ENSDARG00000071425, ENSDARG00000111763 1462 0.997 - - 0.997 - - - - - - N-acetyltransferase 9 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-030131-5097]
76. c8b ENSDARG00000039517 1731 0.997 - - 0.997 - - - - - - complement component 8, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-070912-163]
77. syngr2a ENSDARG00000052429 3431 0.996 - - 0.996 - - - - - - synaptogyrin 2a [Source:ZFIN;Acc:ZDB-GENE-070112-1292]
78. coa5 ENSDARG00000094833 1988 0.996 - - 0.996 - - - - - - cytochrome C oxidase assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-060825-53]
79. ptcd3 ENSDARG00000103856 2107 0.996 - - 0.996 - - - - - - pentatricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6849]
80. plekhh1 ENSDARG00000053835 2123 0.996 - - 0.996 - - - - - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
81. CABZ01013938.1 CABZ01013938.1 4497 0.996 - - 0.996 - - - - - -
82. mbtps1 ENSDARG00000014634, ENSDARG00000109507, ENSDARG00000110774 2290 0.996 - - 0.996 - - - - - - membrane-bound transcription factor peptidase, site 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4909]
83. C3H19orf43 C3H19orf43 2961 0.994 - - 0.994 - - - - - -
84. txnipb ENSDARG00000070000 2365 0.994 - - 0.994 - - - - - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
85. hug 4100 0.994 - - 0.994 - - - - - - HuG, transcript variant X2
86. fscn1a ENSDARG00000059680 3999 0.993 - - 0.993 - - - - - - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
87. UBE2QL1 ENSDARG00000079276 3474 0.993 - - 0.993 - - - - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
88. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 0.992 - - 0.992 - - - - - - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
89. MON2 ENSDARG00000099798 2359 0.992 - - 0.992 - - - - - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:ZFIN;Acc:ZDB-GENE-030131-2712]
90. skib ENSDARG00000008034 6518 0.991 - - 0.991 - - - - - - v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]
91. sec31a ENSDARG00000021082, ENSDARG00000111434, ENSDARG00000114514 6991 0.991 - - 0.991 - - - - - - SEC31 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-020919-2]
92. MRPL21 ENSDARG00000003846 3244 0.991 - - 0.991 - - - - - - mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
93. xpo7 ENSDARG00000005540, ENSDARG00000110221 4566 0.99 - - 0.990 - - - - - - exportin 7 [Source:ZFIN;Acc:ZDB-GENE-060628-2]
94. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 0.99 - - 0.990 - - - - - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
95. pogza ENSDARG00000054778 1495 0.989 - - 0.989 - - - - - - pogo transposable element derived with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-040914-76]
96. PLEKHA6 ENSDARG00000020328 2076 0.988 - - 0.988 - - - - - - pleckstrin homology domain containing, family A member 6 [Source:ZFIN;Acc:ZDB-GENE-140106-14]
97. tfam ENSDARG00000063145 4524 0.988 - - 0.988 - - - - - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
98. ATOX1 ENSDARG00000087693 4016 0.988 - - 0.988 - - - - - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
99. sp8b ENSDARG00000056666 3988 0.987 - - 0.987 - - - - - - sp8 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-030131-3654]
100. TP53BP2 TP53BP2 217 0.986 - - - 0.986 - - - - -

There are 1386 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA