Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole1, section s67.

Sample reads: 133,402. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 12909.91 96774.26
2. eef2b ENSDARG00000100371, ENSDARG00000109247 4303.30 32258.06 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
3. krt4 ENSDARG00000017624, ENSDARG00000115790 4303.30 32258.06 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
4. zgc:161979 zgc:161979 4303.30 32258.06
5. BX511252.1 BX511252.1 2151.65 16129.03
6. CWC15 ENSDARG00000013382 2151.65 16129.03 CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
7. RPL29 ENSDARG00000077717 2151.65 16129.03 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
8. RPL37A RPL37A 2151.65 16129.03
9. acta1a ENSDARG00000036371 2151.65 16129.03 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
10. aldoaa ENSDARG00000011665 2151.65 16129.03 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
11. anp32b ENSDARG00000023330 2151.65 16129.03 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
12. arglu1a ENSDARG00000019223 2151.65 16129.03 arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
13. atp6v0ca ENSDARG00000057853 2151.65 16129.03 ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
14. btf3 ENSDARG00000035400, ENSDARG00000116462 2151.65 16129.03 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
15. ctsla ENSDARG00000007836 2151.65 16129.03 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
16. cyt1l ENSDARG00000036832 2151.65 16129.03 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
17. eif1axb ENSDARG00000057912, ENSDARG00000111310 2151.65 16129.03 eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
18. eif2s1a ENSDARG00000005827 2151.65 16129.03 eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
19. fam192a ENSDARG00000041631 2151.65 16129.03 family with sequence similarity 192, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6692]
20. glula ENSDARG00000099776 2151.65 16129.03 glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
21. gnb2l1 2151.65 16129.03 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
22. gpm6aa ENSDARG00000055455, ENSDARG00000110942 2151.65 16129.03 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
23. hmgn2 ENSDARG00000099572 2151.65 16129.03 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
24. hn1b hn1b 2151.65 16129.03
25. icn ENSDARG00000009978 2151.65 16129.03 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
26. kidins220a ENSDARG00000031240 2151.65 16129.03 kinase D-interacting substrate 220a [Source:ZFIN;Acc:ZDB-GENE-041014-170]
27. krcp ENSDARG00000040224 2151.65 16129.03 kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
28. mcm6 ENSDARG00000057683, ENSDARG00000113317 2151.65 16129.03 minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
29. med23 ENSDARG00000029157 2151.65 16129.03 mediator complex subunit 23 [Source:ZFIN;Acc:ZDB-GENE-040724-82]
30. mt-co1 ENSDARG00000063905 2151.65 16129.03 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
31. mt-co2 ENSDARG00000063908 2151.65 16129.03 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
32. mt-nd4 ENSDARG00000063917 2151.65 16129.03 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
33. pebp1 ENSDARG00000042069 2151.65 16129.03 phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
34. ptgr1 ENSDARG00000024877, ENSDARG00000115676 2151.65 16129.03 prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
35. rab10 ENSDARG00000046106 2151.65 16129.03 RAB10, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-304]
36. ran ENSDARG00000057026 2151.65 16129.03 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
37. rgs12b ENSDARG00000036774 2151.65 16129.03 regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
38. rpl10a ENSDARG00000042905, ENSDARG00000115649 2151.65 16129.03 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
39. rpl21 ENSDARG00000010516, ENSDARG00000110263 2151.65 16129.03 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
40. rps14 ENSDARG00000036629 2151.65 16129.03 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
41. snrpc ENSDARG00000009871 2151.65 16129.03 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
42. snx7 ENSDARG00000105185 2151.65 16129.03 sorting nexin 7 [Source:ZFIN;Acc:ZDB-GENE-040704-77]
43. spata13 ENSDARG00000062837 2151.65 16129.03 spermatogenesis associated 13 [Source:ZFIN;Acc:ZDB-GENE-091116-25]
44. tceb1b 2151.65 16129.03 transcription elongation factor B (SIII), polypeptide 1b
45. ube2kb ENSDARG00000013505, ENSDARG00000114039 2151.65 16129.03 ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-980605-9]
46. unc45b ENSDARG00000008433 2151.65 16129.03 unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
47. usp9 ENSDARG00000013708 2151.65 16129.03 ubiquitin specific peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061019-1]
48. vat1 ENSDARG00000056481, ENSDARG00000111382 2151.65 16129.03 vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
49. vps35 ENSDARG00000008224 2151.65 16129.03 vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
50. zcchc8 ENSDARG00000034982 2151.65 16129.03 zinc finger, CCHC domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-060526-6]
51. zgc:110239 ENSDARG00000077664 2151.65 16129.03 zgc:110239 [Source:ZFIN;Acc:ZDB-GENE-050417-107]
52. zgc:112425 zgc:112425 2151.65 16129.03
53. zgc:161979_1 zgc:161979_1 2151.65 16129.03
54. zgc:165571 zgc:165571 2151.65 16129.03
55. 5S_rRNA 5S_rRNA 0.00 0.00
56. 5S_rRNA_1 5S_rRNA_1 0.00 0.00
57. 5S_rRNA_10 5S_rRNA_10 0.00 0.00
58. 5S_rRNA_11 5S_rRNA_11 0.00 0.00
59. 5S_rRNA_12 5S_rRNA_12 0.00 0.00
60. 5S_rRNA_13 5S_rRNA_13 0.00 0.00
61. 5S_rRNA_14 5S_rRNA_14 0.00 0.00
62. 5S_rRNA_15 5S_rRNA_15 0.00 0.00
63. 5S_rRNA_16 5S_rRNA_16 0.00 0.00
64. 5S_rRNA_17 5S_rRNA_17 0.00 0.00
65. 5S_rRNA_18 5S_rRNA_18 0.00 0.00
66. 5S_rRNA_19 5S_rRNA_19 0.00 0.00
67. 5S_rRNA_2 5S_rRNA_2 0.00 0.00
68. 5S_rRNA_20 5S_rRNA_20 0.00 0.00
69. 5S_rRNA_21 5S_rRNA_21 0.00 0.00
70. 5S_rRNA_22 5S_rRNA_22 0.00 0.00
71. 5S_rRNA_23 5S_rRNA_23 0.00 0.00
72. 5S_rRNA_24 5S_rRNA_24 0.00 0.00
73. 5S_rRNA_25 5S_rRNA_25 0.00 0.00
74. 5S_rRNA_26 5S_rRNA_26 0.00 0.00
75. 5S_rRNA_27 5S_rRNA_27 0.00 0.00
76. 5S_rRNA_28 5S_rRNA_28 0.00 0.00
77. 5S_rRNA_29 5S_rRNA_29 0.00 0.00
78. 5S_rRNA_3 5S_rRNA_3 0.00 0.00
79. 5S_rRNA_30 5S_rRNA_30 0.00 0.00
80. 5S_rRNA_31 5S_rRNA_31 0.00 0.00
81. 5S_rRNA_4 5S_rRNA_4 0.00 0.00
82. 5S_rRNA_5 5S_rRNA_5 0.00 0.00
83. 5S_rRNA_6 5S_rRNA_6 0.00 0.00
84. 5S_rRNA_7 5S_rRNA_7 0.00 0.00
85. 5S_rRNA_8 5S_rRNA_8 0.00 0.00
86. 5S_rRNA_9 5S_rRNA_9 0.00 0.00
87. 5_8S_rRNA 5_8S_rRNA 0.00 0.00
88. 5_8S_rRNA_1 5_8S_rRNA_1 0.00 0.00
89. 5_8S_rRNA_2 5_8S_rRNA_2 0.00 0.00
90. 5_8S_rRNA_3 5_8S_rRNA_3 0.00 0.00
91. 5_8S_rRNA_4 5_8S_rRNA_4 0.00 0.00
92. 5_8S_rRNA_5 5_8S_rRNA_5 0.00 0.00
93. AADAT ENSDARG00000011410 0.00 0.00 aminoadipate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-111229-1]
94. AAED1 ENSDARG00000075299 0.00 0.00 AhpC/TSA antioxidant enzyme domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110914-194]
95. AAK1 AAK1 0.00 0.00
96. ABCA7 ABCA7 0.00 0.00
97. ABCC1 ENSDARG00000104719 0.00 0.00 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-15]
98. ABCC10 ENSDARG00000077988, ENSDARG00000111885, ENSDARG00000113210 0.00 0.00 ATP-binding cassette, sub-family C (CFTR/MRP), member 10 [Source:ZFIN;Acc:ZDB-GENE-050517-24]
99. ABCC3 ENSDARG00000096662 0.00 0.00 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-16]
100. ABCC6 ABCC6 0.00 0.00
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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