Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole1, section s65.

Sample reads: 133,403. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 17500.10 131182.14
2. krt4 ENSDARG00000017624, ENSDARG00000115790 2868.87 21505.28 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. ptmab ENSDARG00000101766 2008.21 15053.70 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
4. mt-co2 ENSDARG00000063908 1721.32 12903.15 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. tmsb4x ENSDARG00000077777 1721.32 12903.15 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
6. mt-nd2 ENSDARG00000063899 1434.43 10752.60 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
7. BX511252.1 BX511252.1 1147.55 8602.13
8. eef1a1l1 ENSDARG00000020850 1147.55 8602.13 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
9. mt-cyb ENSDARG00000063924 1147.55 8602.13 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
10. mt-nd4 ENSDARG00000063917 1147.55 8602.13 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
11. AL954137.2 ENSDARG00000114408 860.66 6451.58
12. apoa1b ENSDARG00000101324 860.66 6451.58 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
13. bhmt ENSDARG00000013430 860.66 6451.58 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
14. btf3 ENSDARG00000035400, ENSDARG00000116462 860.66 6451.58 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
15. faua ENSDARG00000099022 860.66 6451.58 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
16. mt-atp6 ENSDARG00000063911 860.66 6451.58 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
17. pcna ENSDARG00000054155 860.66 6451.58 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
18. ppiaa ENSDARG00000009212 860.66 6451.58 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
19. rpl21 ENSDARG00000010516, ENSDARG00000110263 860.66 6451.58 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
20. rpl23a ENSDARG00000006316 860.66 6451.58 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
21. rpl36a ENSDARG00000058105, ENSDARG00000112656 860.66 6451.58 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
22. rps5 ENSDARG00000043453 860.66 6451.58 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
23. si:dkey-150i13.2 ENSDARG00000071052 860.66 6451.58 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
24. FP067396.1 FP067396.1 573.77 4301.03
25. actb1 ENSDARG00000037746, ENSDARG00000113649 573.77 4301.03 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
26. apoa2 ENSDARG00000015866 573.77 4301.03 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
27. apoeb ENSDARG00000040295 573.77 4301.03 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
28. atp5g1 573.77 4301.03 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
29. ckmb ENSDARG00000040565 573.77 4301.03 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
30. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 573.77 4301.03 v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
31. eif1axb ENSDARG00000057912, ENSDARG00000111310 573.77 4301.03 eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
32. f11r f11r 573.77 4301.03
33. fryl ENSDARG00000040001 573.77 4301.03 furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
34. h2afvb ENSDARG00000116491 573.77 4301.03 H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
35. h3f3a 573.77 4301.03 H3 histone, family 3A, transcript variant X1
36. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 573.77 4301.03 H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
37. hmgn2 ENSDARG00000099572 573.77 4301.03 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
38. hspa8 ENSDARG00000068992, ENSDARG00000114726 573.77 4301.03 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
39. mdka ENSDARG00000036036 573.77 4301.03 midkine a [Source:ZFIN;Acc:ZDB-GENE-990621-1]
40. mt-co3 ENSDARG00000063912 573.77 4301.03 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
41. nol12 ENSDARG00000038027 573.77 4301.03 nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
42. rpl23 ENSDARG00000053457 573.77 4301.03 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
43. rpl27 ENSDARG00000015128 573.77 4301.03 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
44. rpl31 ENSDARG00000053365 573.77 4301.03 ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
45. rpl8 ENSDARG00000014867 573.77 4301.03 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
46. rplp1 ENSDARG00000021864 573.77 4301.03 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
47. rplp2 ENSDARG00000101406 573.77 4301.03 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
48. rps26l ENSDARG00000030408 573.77 4301.03 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
49. rps3 ENSDARG00000103007 573.77 4301.03 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
50. rps6 ENSDARG00000019778 573.77 4301.03 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
51. si:dkey-151g10.6 si:dkey-151g10.6 573.77 4301.03
52. tmeff1b ENSDARG00000056740 573.77 4301.03 transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
53. tpma ENSDARG00000033683 573.77 4301.03 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
54. zgc:161979_1 zgc:161979_1 573.77 4301.03
55. ACVR1B ACVR1B 286.89 2150.55
56. ARFGAP1 ENSDARG00000101616 286.89 2150.55 ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]
57. ATP5B 286.89 2150.55 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
58. C11H12orf10 C11H12orf10 286.89 2150.55
59. C7H16orf87 C7H16orf87 286.89 2150.55
60. CABZ01111496.1 ENSDARG00000003041 286.89 2150.55 E3 ubiquitin-protein ligase pellino homolog 2-like [Source:NCBI gene;Acc:100334245]
61. CPT1A CPT1A 286.89 2150.55
62. CR954963.1 ENSDARG00000097153 286.89 2150.55
63. FHAD1 ENSDARG00000056723, ENSDARG00000116072 286.89 2150.55 forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
64. HNRNPA2B1 HNRNPA2B1 286.89 2150.55
65. MALSU1 MALSU1 286.89 2150.55
66. MYO1D ENSDARG00000036863 286.89 2150.55 myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
67. NDUFB2 ENSDARG00000045490 286.89 2150.55 NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
68. PAQR4 PAQR4 286.89 2150.55
69. PELP1 ENSDARG00000079313 286.89 2150.55 proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
70. PLEKHH3 ENSDARG00000070174 286.89 2150.55 pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
71. RPL29 ENSDARG00000077717 286.89 2150.55 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
72. RPS17L RPS17L 286.89 2150.55
73. SH3BGRL ENSDARG00000058302 286.89 2150.55 SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
74. SIK1 ENSDARG00000058606 286.89 2150.55 salt-inducible kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9446]
75. TCEB3 286.89 2150.55 transcription elongation factor B (SIII), polypeptide 3
76. TRIM35_10 TRIM35_10 286.89 2150.55
77. WDR77 286.89 2150.55 WD repeat domain 77
78. ZBTB41 ENSDARG00000054984 286.89 2150.55 zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
79. abhd4 ENSDARG00000102887 286.89 2150.55 abhydrolase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-83]
80. actb2 ENSDARG00000037870 286.89 2150.55 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
81. actc1b ENSDARG00000099197 286.89 2150.55 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
82. acy3.2 ENSDARG00000005525 286.89 2150.55 aspartoacylase (aminocyclase) 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040718-37]
83. ahnak ENSDARG00000061764 286.89 2150.55 AHNAK nucleoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-8719]
84. ak1 ENSDARG00000001950 286.89 2150.55 adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
85. akap7 ENSDARG00000043843 286.89 2150.55 A kinase (PRKA) anchor protein 7 [Source:ZFIN;Acc:ZDB-GENE-040724-128]
86. alas2 ENSDARG00000038643, ENSDARG00000113125 286.89 2150.55 aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
87. ammecr1 ENSDARG00000012892 286.89 2150.55 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
88. anxa1c ENSDARG00000104359 286.89 2150.55 annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
89. ap2s1 ENSDARG00000026967 286.89 2150.55 adaptor related protein complex 2 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2174]
90. ap3d1 ENSDARG00000071424, ENSDARG00000114974 286.89 2150.55 adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
91. aplnra ENSDARG00000002172 286.89 2150.55 apelin receptor a [Source:ZFIN;Acc:ZDB-GENE-060929-512]
92. apobb apobb 286.89 2150.55
93. apoc1l apoc1l 286.89 2150.55
94. arcn1b ENSDARG00000031214 286.89 2150.55 archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
95. asna1 ENSDARG00000018190 286.89 2150.55 arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
96. atp5d 286.89 2150.55 ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
97. atp5g3b 286.89 2150.55 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
98. blcap ENSDARG00000052073 286.89 2150.55 bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
99. brip1 ENSDARG00000074410, ENSDARG00000113993 286.89 2150.55 BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
100. cacnb2a ENSDARG00000099045 286.89 2150.55 calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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