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Experiment Zebrafish_28hpf_whole1, section s62.

Sample reads: 133,406. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 25805.62 193459.42
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4475.40 33551.15 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoc1l apoc1l 3929.25 29456.78
4. tmsb4x ENSDARG00000077777 1911.53 14330.35 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
5. mt-co2 ENSDARG00000063908 1046.79 7847.57 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. si:dkey-151g10.6 si:dkey-151g10.6 1011.39 7582.18
7. mt-atp6 ENSDARG00000063911 960.82 7203.07 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
8. mt-nd2 ENSDARG00000063899 839.45 6293.18 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
9. eef1a1l1 ENSDARG00000020850 804.06 6027.87 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
10. ppiaa ENSDARG00000009212 763.60 5724.55 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
11. mt-nd4 ENSDARG00000063917 758.54 5686.62 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
12. rpl10a ENSDARG00000042905, ENSDARG00000115649 677.63 5080.05 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
13. rpl23 ENSDARG00000053457 672.57 5042.12 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
14. actb1 ENSDARG00000037746, ENSDARG00000113649 657.40 4928.39 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
15. mt-co3 ENSDARG00000063912 627.06 4700.94 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
16. actb2 ENSDARG00000037870 616.95 4625.15 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
17. zgc:112425 zgc:112425 586.61 4397.69
18. rpl8 ENSDARG00000014867 556.26 4170.17 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
19. rpl21 ENSDARG00000010516, ENSDARG00000110263 530.98 3980.65 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
20. rpl18a ENSDARG00000025073 510.75 3828.99 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
21. id1 ENSDARG00000040764 495.58 3715.26 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
22. rpl26 ENSDARG00000102317 490.52 3677.33 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
23. btf3 ENSDARG00000035400, ENSDARG00000116462 480.41 3601.53 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
24. hmga1a ENSDARG00000028335 480.41 3601.53 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
25. apoeb ENSDARG00000040295 460.18 3449.87 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
26. rpl9 ENSDARG00000037350, ENSDARG00000112384 460.18 3449.87 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
27. efemp2a ENSDARG00000094324 455.13 3412.02 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
28. krt8 ENSDARG00000058358, ENSDARG00000109279 455.13 3412.02 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
29. rps14 ENSDARG00000036629 439.95 3298.21 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
30. rps15 ENSDARG00000070849, ENSDARG00000110979 429.84 3222.42 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
31. zgc:92533 zgc:92533 429.84 3222.42
32. rps26l ENSDARG00000030408 424.78 3184.49 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
33. ptmab ENSDARG00000101766 419.73 3146.63 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
34. rpl36 ENSDARG00000100588 409.61 3070.76 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
35. rps23 ENSDARG00000021838 409.61 3070.76 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
36. rpl36a ENSDARG00000058105, ENSDARG00000112656 389.39 2919.18 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
37. cfl1l ENSDARG00000012972 384.33 2881.24 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
38. mt-cyb ENSDARG00000063924 384.33 2881.24 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
39. rps27a ENSDARG00000032725, ENSDARG00000114059 384.33 2881.24 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
40. rpl35 ENSDARG00000018334 374.21 2805.38 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
41. hsp90ab1 ENSDARG00000029150 369.16 2767.52 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
42. eef2b ENSDARG00000100371, ENSDARG00000109247 359.04 2691.65 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
43. rpl11 ENSDARG00000043509 359.04 2691.65 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
44. rpl27 ENSDARG00000015128 359.04 2691.65 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
45. RPL29 ENSDARG00000077717 348.93 2615.86 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
46. cyt1l ENSDARG00000036832 343.87 2577.92 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
47. mt-nd1 ENSDARG00000063895 343.87 2577.92 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
48. rpl18 ENSDARG00000029533 343.87 2577.92 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
49. col1a1a ENSDARG00000012405, ENSDARG00000116113 338.82 2540.06 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
50. rplp1 ENSDARG00000021864 338.82 2540.06 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
51. rpl19 ENSDARG00000013307 333.76 2502.13 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
52. rps15a ENSDARG00000010160 333.76 2502.13 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
53. rpl6 ENSDARG00000058451 328.70 2464.20 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
54. si:dkey-150i13.2 ENSDARG00000071052 323.64 2426.26 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
55. hspa8 ENSDARG00000068992, ENSDARG00000114726 318.59 2388.40 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
56. si:dkeyp-86f7.3 si:dkeyp-86f7.3 318.59 2388.40
57. wu:fb17f05 wu:fb17f05 318.59 2388.40
58. zgc:92061 zgc:92061 303.42 2274.68
59. rpl15 ENSDARG00000009285 288.25 2160.95 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
60. rps4x ENSDARG00000014690 288.25 2160.95 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
61. pcna ENSDARG00000054155 273.08 2047.22 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
62. rps12 ENSDARG00000036875, ENSDARG00000115157 273.08 2047.22 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
63. rpl5b ENSDARG00000015862, ENSDARG00000109661 268.02 2009.29 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
64. rps6 ENSDARG00000019778 268.02 2009.29 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
65. rps25 ENSDARG00000041811 262.96 1971.36 ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
66. rps2 ENSDARG00000077291 252.85 1895.56 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
67. rps9 ENSDARG00000011405, ENSDARG00000113248 242.73 1819.70 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
68. faua ENSDARG00000099022 237.68 1781.84 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
69. AL954137.2 ENSDARG00000114408 232.62 1743.90
70. rpl31 ENSDARG00000053365 232.62 1743.90 ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
71. rpl7 ENSDARG00000007320 232.62 1743.90 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
72. rplp2l ENSDARG00000011201 232.62 1743.90 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
73. rps19 ENSDARG00000030602 232.62 1743.90 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
74. rpl23a ENSDARG00000006316 227.56 1705.97 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
75. rpl24 ENSDARG00000099104 227.56 1705.97 ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
76. rps10 ENSDARG00000034897 222.51 1668.11 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
77. rps20 ENSDARG00000036044 222.51 1668.11 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
78. rps27.1 ENSDARG00000023298 222.51 1668.11 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
79. rpl14 ENSDARG00000103433 217.45 1630.18 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
80. rpl17 ENSDARG00000057556 217.45 1630.18 ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
81. rpsa ENSDARG00000019181 217.45 1630.18 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
82. im:7150988 ENSDARG00000109310 212.39 1592.24 im:7150988 [Source:ZFIN;Acc:ZDB-GENE-050309-169]
83. rpl39 ENSDARG00000036316, ENSDARG00000117167 212.39 1592.24 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
84. rps5 ENSDARG00000043453 212.39 1592.24 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
85. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 207.34 1554.39 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
86. rps7 ENSDARG00000042566 207.34 1554.39 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
87. si:ch1073-429i10.3 202.28 1516.45 si:ch1073-429i10.3, transcript variant X2
88. rps3 ENSDARG00000103007 197.22 1478.52 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
89. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 197.22 1478.52 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
90. ran ENSDARG00000057026 192.16 1440.58 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
91. rpl35a ENSDARG00000088030 192.16 1440.58 ribosomal protein L35a [Source:ZFIN;Acc:ZDB-GENE-040718-190]
92. eif5a ENSDARG00000017235 187.11 1402.73 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
93. rplp0 ENSDARG00000051783 187.11 1402.73 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
94. rplp2 ENSDARG00000101406 187.11 1402.73 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
95. rps24 ENSDARG00000039347 187.11 1402.73 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
96. bcam ENSDARG00000090190 182.05 1364.79 basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
97. pabpc1a ENSDARG00000017219 182.05 1364.79 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
98. rpl34 ENSDARG00000029500 182.05 1364.79 ribosomal protein L34 [Source:ZFIN;Acc:ZDB-GENE-040426-1033]
99. AC024175.17 AC024175.17 176.99 1326.86
100. cfl1 ENSDARG00000021124 176.99 1326.86 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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