Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_28hpf_whole1, section s58.

Sample reads: 133,406. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 11076.73 83030.48
2. krt4 ENSDARG00000017624, ENSDARG00000115790 6119.38 45870.49 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tmsb4x ENSDARG00000077777 2045.68 15334.29 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. mt-co2 ENSDARG00000063908 1418.28 10631.34 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. apoc1l apoc1l 1219.46 9141.00
6. mt-atp6 ENSDARG00000063911 1166.44 8743.56 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
7. mt-nd4 ENSDARG00000063917 1113.42 8346.13 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
8. si:dkey-151g10.6 si:dkey-151g10.6 1064.82 7981.82
9. mt-nd2 ENSDARG00000063899 1011.80 7584.39 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
10. ppiaa ENSDARG00000009212 892.50 6690.12 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
11. actb1 ENSDARG00000037746, ENSDARG00000113649 830.64 6226.43 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
12. actb2 ENSDARG00000037870 773.21 5795.93 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
13. eef1a1l1 ENSDARG00000020850 759.95 5696.54 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
14. zgc:112425 zgc:112425 755.53 5663.41
15. mt-nd1 ENSDARG00000063895 729.02 5464.69 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
16. rpl10a ENSDARG00000042905, ENSDARG00000115649 711.35 5332.24 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
17. mt-co3 ENSDARG00000063912 706.93 5299.10 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
18. rpl23 ENSDARG00000053457 676.00 5067.25 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
19. rpl18a ENSDARG00000025073 671.58 5034.12 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
20. rpl21 ENSDARG00000010516, ENSDARG00000110263 658.33 4934.80 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
21. hmga1a ENSDARG00000028335 574.38 4305.52 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
22. cyt1l ENSDARG00000036832 543.45 4073.67 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
23. rpl36 ENSDARG00000100588 543.45 4073.67 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
24. efemp2a ENSDARG00000094324 534.62 4007.48 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
25. rps14 ENSDARG00000036629 534.62 4007.48 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
26. zgc:92533 zgc:92533 508.11 3808.76
27. rpl8 ENSDARG00000014867 494.85 3709.36 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
28. rpl19 ENSDARG00000013307 490.43 3676.23 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
29. btf3 ENSDARG00000035400, ENSDARG00000116462 477.18 3576.91 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
30. rpl11 ENSDARG00000043509 450.67 3378.19 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
31. rpl27 ENSDARG00000015128 450.67 3378.19 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
32. mt-cyb ENSDARG00000063924 441.83 3311.93 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
33. rpl26 ENSDARG00000102317 441.83 3311.93 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
34. rps27a ENSDARG00000032725, ENSDARG00000114059 441.83 3311.93 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
35. rps23 ENSDARG00000021838 437.41 3278.80 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
36. rpl9 ENSDARG00000037350, ENSDARG00000112384 428.58 3212.61 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
37. acta1a ENSDARG00000036371 424.16 3179.48 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
38. ptmab ENSDARG00000101766 424.16 3179.48 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
39. rps26l ENSDARG00000030408 424.16 3179.48 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
40. id1 ENSDARG00000040764 419.74 3146.34 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
41. cfl1l ENSDARG00000012972 415.32 3113.21 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
42. rps15 ENSDARG00000070849, ENSDARG00000110979 402.07 3013.89 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
43. si:dkeyp-86f7.3 si:dkeyp-86f7.3 402.07 3013.89
44. krt8 ENSDARG00000058358, ENSDARG00000109279 388.81 2914.50 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
45. pcna ENSDARG00000054155 388.81 2914.50 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
46. col1a1a ENSDARG00000012405, ENSDARG00000116113 384.39 2881.36 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
47. rpl35 ENSDARG00000018334 379.98 2848.31 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
48. rps10 ENSDARG00000034897 357.88 2682.65 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
49. rpl36a ENSDARG00000058105, ENSDARG00000112656 353.47 2649.59 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
50. rpl18 ENSDARG00000029533 349.05 2616.46 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
51. rpl7 ENSDARG00000007320 340.21 2550.19 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
52. rps15a ENSDARG00000010160 340.21 2550.19 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
53. rps2 ENSDARG00000077291 340.21 2550.19 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
54. eef2b ENSDARG00000100371, ENSDARG00000109247 335.79 2517.06 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
55. hspa8 ENSDARG00000068992, ENSDARG00000114726 331.37 2483.93 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
56. rps3 ENSDARG00000103007 326.96 2450.87 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
57. rps4x ENSDARG00000014690 318.12 2384.61 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
58. rpl5b ENSDARG00000015862, ENSDARG00000109661 309.28 2318.34 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
59. RPL29 ENSDARG00000077717 304.86 2285.21 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
60. rps20 ENSDARG00000036044 304.86 2285.21 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
61. rps5 ENSDARG00000043453 304.86 2285.21 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
62. rpl6 ENSDARG00000058451 296.03 2219.02 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
63. rps19 ENSDARG00000030602 296.03 2219.02 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
64. cirbp cirbp 291.61 2185.89
65. eif5a ENSDARG00000017235 291.61 2185.89 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
66. rpl15 ENSDARG00000009285 291.61 2185.89 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
67. si:ch1073-429i10.3 291.61 2185.89 si:ch1073-429i10.3, transcript variant X2
68. rplp1 ENSDARG00000021864 287.19 2152.76 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
69. hsp90ab1 ENSDARG00000029150 282.77 2119.63 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
70. rps9 ENSDARG00000011405, ENSDARG00000113248 282.77 2119.63 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
71. rps6 ENSDARG00000019778 278.35 2086.49 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
72. myl10 ENSDARG00000062592 269.52 2020.31 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
73. zgc:123194 zgc:123194 269.52 2020.31
74. rplp0 ENSDARG00000051783 260.68 1954.04 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
75. rplp2l ENSDARG00000011201 256.26 1920.91 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
76. rpsa ENSDARG00000019181 256.26 1920.91 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
77. hmgn2 ENSDARG00000099572 247.43 1854.72 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
78. ran ENSDARG00000057026 247.43 1854.72 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
79. zgc:66286 zgc:66286 247.43 1854.72
80. tpma ENSDARG00000033683 243.01 1821.59 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
81. rps25 ENSDARG00000041811 238.59 1788.46 ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
82. rpl30 ENSDARG00000035871, ENSDARG00000109253 234.17 1755.32 ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
83. AL954137.2 ENSDARG00000114408 229.75 1722.19
84. RPL37A RPL37A 229.75 1722.19
85. zgc:165571 zgc:165571 229.75 1722.19
86. tuba8l ENSDARG00000042708 225.33 1689.06 tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
87. fkbp1aa ENSDARG00000022684 220.92 1656.00 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
88. rps27.1 ENSDARG00000023298 220.92 1656.00 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
89. rps7 ENSDARG00000042566 220.92 1656.00 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
90. apoeb ENSDARG00000040295 212.08 1589.74 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
91. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 212.08 1589.74 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
92. rpl23a ENSDARG00000006316 212.08 1589.74 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
93. gnb2l1 207.66 1556.61 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
94. mt-co1 ENSDARG00000063905 203.24 1523.47 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
95. rpl32 ENSDARG00000054818, ENSDARG00000110237, ENSDARG00000115707 203.24 1523.47 ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060331-105]
96. rpl35a ENSDARG00000088030 203.24 1523.47 ribosomal protein L35a [Source:ZFIN;Acc:ZDB-GENE-040718-190]
97. rps12 ENSDARG00000036875, ENSDARG00000115157 203.24 1523.47 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
98. faua ENSDARG00000099022 198.82 1490.34 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
99. rpl31 ENSDARG00000053365 198.82 1490.34 ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
100. rps18 ENSDARG00000100392 198.82 1490.34 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA