Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole1, section s57.

Sample reads: 133,402. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 7647.39 57326.00
2. krt4 ENSDARG00000017624, ENSDARG00000115790 6039.38 45272.11 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tmsb4x ENSDARG00000077777 3664.76 27471.60 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. mt-co2 ENSDARG00000063908 2069.22 15511.19 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. mt-nd2 ENSDARG00000063899 1813.68 13595.62 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. mt-atp6 ENSDARG00000063911 1763.82 13221.86 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
7. si:dkey-151g10.6 si:dkey-151g10.6 1159.26 8689.99
8. mt-co3 ENSDARG00000063912 959.82 7194.96 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
9. apoc1l apoc1l 903.73 6774.50
10. mt-nd1 ENSDARG00000063895 897.49 6727.72 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
11. efemp2a ENSDARG00000094324 872.56 6540.84 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
12. rps26l ENSDARG00000030408 853.87 6400.74 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
13. rpl23 ENSDARG00000053457 847.63 6353.96 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
14. zgc:112425 zgc:112425 816.47 6120.38
15. rps23 ENSDARG00000021838 785.31 5886.80 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
16. mt-nd4 ENSDARG00000063917 779.07 5840.03 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
17. ppiaa ENSDARG00000009212 760.38 5699.92 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
18. actb2 ENSDARG00000037870 754.14 5653.15 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
19. rpl10a ENSDARG00000042905, ENSDARG00000115649 735.45 5513.05 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
20. rpl18a ENSDARG00000025073 704.28 5279.39 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
21. rpl36 ENSDARG00000100588 629.49 4718.75 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
22. hmga1a ENSDARG00000028335 623.26 4672.05 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
23. rpl21 ENSDARG00000010516, ENSDARG00000110263 592.10 4438.47 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
24. rpl26 ENSDARG00000102317 579.63 4344.99 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
25. rps15 ENSDARG00000070849, ENSDARG00000110979 567.17 4251.59 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
26. rpl36a ENSDARG00000058105, ENSDARG00000112656 554.70 4158.12 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
27. rps14 ENSDARG00000036629 542.24 4064.71 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
28. eef1a1l1 ENSDARG00000020850 517.31 3877.83 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
29. rps27a ENSDARG00000032725, ENSDARG00000114059 492.37 3690.88 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
30. rpl9 ENSDARG00000037350, ENSDARG00000112384 479.91 3597.48 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
31. rpl8 ENSDARG00000014867 467.44 3504.00 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
32. rps15a ENSDARG00000010160 461.21 3457.30 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
33. myl10 ENSDARG00000062592 448.75 3363.90 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
34. actb1 ENSDARG00000037746, ENSDARG00000113649 423.82 3177.02 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
35. rpl27 ENSDARG00000015128 423.82 3177.02 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
36. mt-cyb ENSDARG00000063924 417.58 3130.24 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
37. RPL29 ENSDARG00000077717 392.65 2943.36 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
38. cyt1l ENSDARG00000036832 392.65 2943.36 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
39. rps5 ENSDARG00000043453 392.65 2943.36 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
40. hspa8 ENSDARG00000068992, ENSDARG00000114726 386.42 2896.66 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
41. rpl19 ENSDARG00000013307 386.42 2896.66 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
42. eef2b ENSDARG00000100371, ENSDARG00000109247 380.19 2849.96 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
43. acta1a ENSDARG00000036371 367.72 2756.49 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
44. ptmab ENSDARG00000101766 367.72 2756.49 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
45. pcna ENSDARG00000054155 361.49 2709.78 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
46. rpl31 ENSDARG00000053365 361.49 2709.78 ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
47. rpl23a ENSDARG00000006316 355.26 2663.08 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
48. rpl28 ENSDARG00000005791 355.26 2663.08 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
49. si:dkeyp-86f7.3 si:dkeyp-86f7.3 355.26 2663.08
50. zgc:92533 zgc:92533 355.26 2663.08
51. zgc:66286 zgc:66286 342.79 2569.61
52. RPL37A RPL37A 324.09 2429.43
53. rps27.1 ENSDARG00000023298 324.09 2429.43 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
54. rpl39 ENSDARG00000036316, ENSDARG00000117167 317.86 2382.73 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
55. rps18 ENSDARG00000100392 317.86 2382.73 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
56. rps29 ENSDARG00000041232 317.86 2382.73 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
57. col1a1a ENSDARG00000012405, ENSDARG00000116113 311.63 2336.03 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
58. rps4x ENSDARG00000014690 311.63 2336.03 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
59. si:ch1073-429i10.3 311.63 2336.03 si:ch1073-429i10.3, transcript variant X2
60. zgc:165571 zgc:165571 311.63 2336.03
61. rpl11 ENSDARG00000043509 299.16 2242.55 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
62. rpl22 ENSDARG00000070437 299.16 2242.55 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
63. rpl35 ENSDARG00000018334 299.16 2242.55 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
64. h3f3a 292.93 2195.85 H3 histone, family 3A, transcript variant X1
65. rpl30 ENSDARG00000035871, ENSDARG00000109253 292.93 2195.85 ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
66. rps20 ENSDARG00000036044 292.93 2195.85 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
67. rpl14 ENSDARG00000103433 286.70 2149.15 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
68. rpl18 ENSDARG00000029533 286.70 2149.15 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
69. rps19 ENSDARG00000030602 286.70 2149.15 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
70. btf3 ENSDARG00000035400, ENSDARG00000116462 280.47 2102.45 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
71. icn ENSDARG00000009978 274.23 2055.67 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
72. rpl35a ENSDARG00000088030 274.23 2055.67 ribosomal protein L35a [Source:ZFIN;Acc:ZDB-GENE-040718-190]
73. rpl5b ENSDARG00000015862, ENSDARG00000109661 274.23 2055.67 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
74. rps2 ENSDARG00000077291 274.23 2055.67 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
75. cfl1l ENSDARG00000012972 268.00 2008.97 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
76. hsp90ab1 ENSDARG00000029150 268.00 2008.97 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
77. id1 ENSDARG00000040764 268.00 2008.97 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
78. rplp2l ENSDARG00000011201 268.00 2008.97 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
79. rps24 ENSDARG00000039347 268.00 2008.97 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
80. uba52 ENSDARG00000041435 268.00 2008.97 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
81. rps10 ENSDARG00000034897 261.77 1962.27 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
82. tpma ENSDARG00000033683 261.77 1962.27 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
83. faua ENSDARG00000099022 255.54 1915.57 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
84. rpl15 ENSDARG00000009285 255.54 1915.57 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
85. krt8 ENSDARG00000058358, ENSDARG00000109279 249.30 1868.79 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
86. rpl24 ENSDARG00000099104 249.30 1868.79 ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
87. rpl34 ENSDARG00000029500 249.30 1868.79 ribosomal protein L34 [Source:ZFIN;Acc:ZDB-GENE-040426-1033]
88. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 243.07 1822.09 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
89. rpl17 ENSDARG00000057556 236.84 1775.39 ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
90. rps3 ENSDARG00000103007 236.84 1775.39 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
91. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 230.61 1728.69 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
92. rps25 ENSDARG00000041811 230.61 1728.69 ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
93. bcam ENSDARG00000090190 224.37 1681.91 basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
94. cox8a ENSDARG00000095273 224.37 1681.91 cytochrome c oxidase subunit 8A [Source:ZFIN;Acc:ZDB-GENE-030131-9136]
95. rplp1 ENSDARG00000021864 224.37 1681.91 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
96. ppiab ENSDARG00000103994 218.14 1635.21 peptidylprolyl isomerase Ab (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-7459]
97. rpl7 ENSDARG00000007320 218.14 1635.21 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
98. rps9 ENSDARG00000011405, ENSDARG00000113248 218.14 1635.21 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
99. rpsa ENSDARG00000019181 218.14 1635.21 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
100. fkbp1aa ENSDARG00000022684 211.91 1588.51 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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