Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_28hpf_whole1, section s56.

Sample reads: 133,401. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 18752.64 140577.85
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4693.08 35181.35 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tmsb4x ENSDARG00000077777 2169.37 16262.53 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. mt-co2 ENSDARG00000063908 1441.00 10802.36 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. mt-nd2 ENSDARG00000063899 1271.70 9533.21 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. mt-atp6 ENSDARG00000063911 1228.39 9208.54 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
7. mt-nd4 ENSDARG00000063917 968.54 7260.59 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
8. zgc:112425 zgc:112425 948.85 7112.99
9. actb2 ENSDARG00000037870 913.42 6847.39 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
10. si:dkey-151g10.6 si:dkey-151g10.6 874.05 6552.25
11. eef1a1l1 ENSDARG00000020850 740.18 5548.71 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
12. mt-co3 ENSDARG00000063912 728.37 5460.17 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
13. ppiaa ENSDARG00000009212 724.44 5430.71 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
14. actb1 ENSDARG00000037746, ENSDARG00000113649 720.50 5401.18 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
15. efemp2a ENSDARG00000094324 626.01 4692.84 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
16. rpl23 ENSDARG00000053457 626.01 4692.84 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
17. hmga1a ENSDARG00000028335 622.07 4663.30 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
18. mt-nd1 ENSDARG00000063895 590.57 4427.17 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
19. rpl10a ENSDARG00000042905, ENSDARG00000115649 582.70 4368.17 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
20. acta1a ENSDARG00000036371 519.70 3895.89 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
21. eef2b ENSDARG00000100371, ENSDARG00000109247 507.89 3807.36 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
22. rps26l ENSDARG00000030408 500.02 3748.36 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
23. apoc1l apoc1l 496.08 3718.83
24. rpl18a ENSDARG00000025073 472.46 3541.76 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
25. rpl26 ENSDARG00000102317 472.46 3541.76 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
26. rps14 ENSDARG00000036629 460.65 3453.23 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
27. ptmab ENSDARG00000101766 452.77 3394.16 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
28. rps23 ENSDARG00000021838 425.21 3187.56 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
29. pcna ENSDARG00000054155 417.34 3128.56 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
30. rpl21 ENSDARG00000010516, ENSDARG00000110263 405.53 3040.03 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
31. rpl8 ENSDARG00000014867 401.59 3010.49 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
32. rpl11 ENSDARG00000043509 397.65 2980.96 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
33. rpl9 ENSDARG00000037350, ENSDARG00000112384 397.65 2980.96 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
34. si:dkeyp-86f7.3 si:dkeyp-86f7.3 393.71 2951.42
35. id1 ENSDARG00000040764 381.90 2862.89 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
36. hspa8 ENSDARG00000068992, ENSDARG00000114726 377.97 2833.43 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
37. rps27a ENSDARG00000032725, ENSDARG00000114059 366.15 2744.82 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
38. btf3 ENSDARG00000035400, ENSDARG00000116462 358.28 2685.82 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
39. rps2 ENSDARG00000077291 358.28 2685.82 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
40. zgc:92533 zgc:92533 358.28 2685.82
41. rpl19 ENSDARG00000013307 350.41 2626.82 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
42. rpl36 ENSDARG00000100588 326.78 2449.68 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
43. rpl36a ENSDARG00000058105, ENSDARG00000112656 322.85 2420.22 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
44. hsp90ab1 ENSDARG00000029150 314.97 2361.15 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
45. mt-cyb ENSDARG00000063924 314.97 2361.15 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
46. rplp1 ENSDARG00000021864 314.97 2361.15 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
47. rps15 ENSDARG00000070849, ENSDARG00000110979 314.97 2361.15 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
48. AL954137.2 ENSDARG00000114408 311.03 2331.61
49. col1a1a ENSDARG00000012405, ENSDARG00000116113 311.03 2331.61 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
50. cyt1l ENSDARG00000036832 311.03 2331.61 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
51. rpl27 ENSDARG00000015128 307.10 2302.15 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
52. rpl18 ENSDARG00000029533 299.22 2243.08 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
53. rps12 ENSDARG00000036875, ENSDARG00000115157 291.35 2184.08 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
54. krt8 ENSDARG00000058358, ENSDARG00000109279 279.54 2095.55 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
55. rpl6 ENSDARG00000058451 275.60 2066.02 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
56. rps5 ENSDARG00000043453 275.60 2066.02 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
57. rps6 ENSDARG00000019778 275.60 2066.02 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
58. rps4x ENSDARG00000014690 271.66 2036.48 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
59. tpma ENSDARG00000033683 267.73 2007.02 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
60. RPL29 ENSDARG00000077717 263.79 1977.48 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
61. rps15a ENSDARG00000010160 263.79 1977.48 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
62. rpl7 ENSDARG00000007320 259.85 1947.95 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
63. zgc:66286 zgc:66286 259.85 1947.95
64. rpl35 ENSDARG00000018334 255.91 1918.41 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
65. eif5a ENSDARG00000017235 251.98 1888.95 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
66. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 251.98 1888.95 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
67. cfl1l ENSDARG00000012972 244.10 1829.88 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
68. fabp3 ENSDARG00000023290 240.17 1800.42 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
69. rps10 ENSDARG00000034897 240.17 1800.42 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
70. rps3 ENSDARG00000103007 232.29 1741.35 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
71. zgc:123194 zgc:123194 232.29 1741.35
72. cirbp cirbp 228.35 1711.81
73. rplp2l ENSDARG00000011201 228.35 1711.81 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
74. si:ch1073-429i10.3 228.35 1711.81 si:ch1073-429i10.3, transcript variant X2
75. myl10 ENSDARG00000062592 224.42 1682.35 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
76. rpl14 ENSDARG00000103433 212.61 1593.82 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
77. rpl5b ENSDARG00000015862, ENSDARG00000109661 212.61 1593.82 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
78. rpl35a ENSDARG00000088030 208.67 1564.28 ribosomal protein L35a [Source:ZFIN;Acc:ZDB-GENE-040718-190]
79. rplp0 ENSDARG00000051783 208.67 1564.28 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
80. pabpc1a ENSDARG00000017219 204.73 1534.74 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
81. rpl17 ENSDARG00000057556 204.73 1534.74 ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
82. rpl34 ENSDARG00000029500 204.73 1534.74 ribosomal protein L34 [Source:ZFIN;Acc:ZDB-GENE-040426-1033]
83. rps20 ENSDARG00000036044 204.73 1534.74 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
84. rps9 ENSDARG00000011405, ENSDARG00000113248 204.73 1534.74 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
85. RPL37A RPL37A 200.79 1505.21
86. bcam ENSDARG00000090190 200.79 1505.21 basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
87. cd81 cd81 200.79 1505.21
88. mt-co1 ENSDARG00000063905 200.79 1505.21 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
89. ppiab ENSDARG00000103994 200.79 1505.21 peptidylprolyl isomerase Ab (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-7459]
90. rps27.1 ENSDARG00000023298 200.79 1505.21 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
91. gnb2l1 196.86 1475.75 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
92. rpl15 ENSDARG00000009285 192.92 1446.21 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
93. zgc:165571 zgc:165571 192.92 1446.21
94. cfl1 ENSDARG00000021124 188.98 1416.68 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
95. eif5a2 ENSDARG00000056186 188.98 1416.68 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
96. faua ENSDARG00000099022 188.98 1416.68 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
97. calm3a_1 ENSDARG00000015050, ENSDARG00000100825 185.05 1387.21 calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
98. rpl39 ENSDARG00000036316, ENSDARG00000117167 185.05 1387.21 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
99. hsp90aa1.1 ENSDARG00000010478 177.17 1328.14 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
100. khdrbs1a ENSDARG00000052856 177.17 1328.14 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA