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Experiment Zebrafish_28hpf_whole1, section s54.

Sample reads: 133,397. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 27953.53 209550.80
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3606.64 27036.81 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tmsb4x ENSDARG00000077777 1716.66 12868.77 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. mt-co2 ENSDARG00000063908 1475.26 11059.14 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. mt-nd2 ENSDARG00000063899 1200.84 9001.98 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. si:dkey-151g10.6 si:dkey-151g10.6 1138.94 8537.95
7. mt-atp6 ENSDARG00000063911 1062.60 7965.67 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
8. mt-nd4 ENSDARG00000063917 868.65 6511.75 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
9. ppiaa ENSDARG00000009212 804.69 6032.28 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
10. zgc:112425 zgc:112425 746.91 5599.14
11. rpl10a ENSDARG00000042905, ENSDARG00000115649 701.52 5258.87 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
12. mt-co3 ENSDARG00000063912 672.63 5042.30 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
13. rpl23 ENSDARG00000053457 664.38 4980.46 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
14. eef1a1l1 ENSDARG00000020850 614.86 4609.24 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
15. rpl21 ENSDARG00000010516, ENSDARG00000110263 565.34 4238.01 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
16. mt-nd1 ENSDARG00000063895 550.90 4129.77 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
17. actb2 ENSDARG00000037870 548.84 4114.32 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
18. actb1 ENSDARG00000037746, ENSDARG00000113649 538.52 4036.96 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
19. myl10 ENSDARG00000062592 528.20 3959.60 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
20. rpl8 ENSDARG00000014867 505.51 3789.50 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
21. rps26l ENSDARG00000030408 503.44 3773.99 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
22. hmga1a ENSDARG00000028335 484.87 3634.78 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
23. rpl18a ENSDARG00000025073 482.81 3619.34 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
24. efemp2a ENSDARG00000094324 474.56 3557.49 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
25. rpl26 ENSDARG00000102317 474.56 3557.49 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
26. acta1a ENSDARG00000036371 464.24 3480.13 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
27. rps23 ENSDARG00000021838 451.86 3387.32 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
28. rps15 ENSDARG00000070849, ENSDARG00000110979 443.61 3325.48 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
29. rpl36 ENSDARG00000100588 437.42 3279.07 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
30. rpl11 ENSDARG00000043509 427.10 3201.71 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
31. mt-cyb ENSDARG00000063924 418.85 3139.87 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
32. rps14 ENSDARG00000036629 418.85 3139.87 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
33. cyt1l ENSDARG00000036832 416.79 3124.42 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
34. rpl9 ENSDARG00000037350, ENSDARG00000112384 416.79 3124.42 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
35. hspa8 ENSDARG00000068992, ENSDARG00000114726 406.47 3047.06 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
36. rpl36a ENSDARG00000058105, ENSDARG00000112656 406.47 3047.06 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
37. tpma ENSDARG00000033683 402.34 3016.10 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
38. btf3 ENSDARG00000035400, ENSDARG00000116462 398.22 2985.22 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
39. rpl19 ENSDARG00000013307 396.15 2969.70 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
40. rps27a ENSDARG00000032725, ENSDARG00000114059 387.90 2907.85 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
41. rps5 ENSDARG00000043453 375.52 2815.05 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
42. rps15a ENSDARG00000010160 367.27 2753.20 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
43. rplp1 ENSDARG00000021864 363.14 2722.24 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
44. zgc:66286 zgc:66286 363.14 2722.24
45. si:dkeyp-86f7.3 si:dkeyp-86f7.3 352.82 2644.88
46. zgc:92533 zgc:92533 352.82 2644.88
47. RPL29 ENSDARG00000077717 342.51 2567.59 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
48. apoc1l apoc1l 332.19 2490.23
49. rps19 ENSDARG00000030602 323.94 2428.38 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
50. rps20 ENSDARG00000036044 321.87 2412.87 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
51. ptmab ENSDARG00000101766 317.75 2381.98 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
52. rpl27 ENSDARG00000015128 301.24 2258.22 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
53. rps6 ENSDARG00000019778 299.18 2242.77 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
54. rpl35 ENSDARG00000018334 297.11 2227.25 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
55. rpl6 ENSDARG00000058451 297.11 2227.25 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
56. eef2b ENSDARG00000100371, ENSDARG00000109247 288.86 2165.41 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
57. rpl15 ENSDARG00000009285 288.86 2165.41 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
58. rpl7 ENSDARG00000007320 288.86 2165.41 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
59. rpl18 ENSDARG00000029533 280.61 2103.56 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
60. rpl23a ENSDARG00000006316 280.61 2103.56 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
61. rps2 ENSDARG00000077291 272.36 2041.72 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
62. AL954137.2 ENSDARG00000114408 270.29 2026.20
63. rps27.1 ENSDARG00000023298 270.29 2026.20 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
64. rps10 ENSDARG00000034897 268.23 2010.76 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
65. rpsa ENSDARG00000019181 264.10 1979.80 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
66. eif5a ENSDARG00000017235 262.04 1964.36 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
67. cfl1 ENSDARG00000021124 255.85 1917.95 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
68. rplp2l ENSDARG00000011201 251.72 1886.99 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
69. rps3 ENSDARG00000103007 243.47 1825.15 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
70. cfl1l ENSDARG00000012972 241.41 1809.71 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
71. id1 ENSDARG00000040764 239.34 1794.19 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
72. rpl24 ENSDARG00000099104 237.28 1778.75 ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
73. pcna ENSDARG00000054155 233.15 1747.79 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
74. COX5B_1 ENSDARG00000015978 229.03 1716.90 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
75. rpl22 ENSDARG00000070437 229.03 1716.90 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
76. rps12 ENSDARG00000036875, ENSDARG00000115157 229.03 1716.90 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
77. rpl31 ENSDARG00000053365 224.90 1685.94 ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
78. rpl39 ENSDARG00000036316, ENSDARG00000117167 224.90 1685.94 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
79. rpl5b ENSDARG00000015862, ENSDARG00000109661 224.90 1685.94 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
80. rps4x ENSDARG00000014690 224.90 1685.94 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
81. faua ENSDARG00000099022 222.84 1670.50 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
82. rps9 ENSDARG00000011405, ENSDARG00000113248 222.84 1670.50 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
83. hsp90aa1.1 ENSDARG00000010478 220.77 1654.98 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
84. hsp90ab1 ENSDARG00000029150 220.77 1654.98 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
85. rps24 ENSDARG00000039347 214.58 1608.58 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
86. smyhc1 ENSDARG00000099959, ENSDARG00000115916 214.58 1608.58 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
87. rpl34 ENSDARG00000029500 208.39 1562.17 ribosomal protein L34 [Source:ZFIN;Acc:ZDB-GENE-040426-1033]
88. rpl28 ENSDARG00000005791 206.33 1546.73 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
89. rpl30 ENSDARG00000035871, ENSDARG00000109253 206.33 1546.73 ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
90. rps18 ENSDARG00000100392 202.20 1515.77 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
91. h3f3a 200.14 1500.33 H3 histone, family 3A, transcript variant X1
92. krt8 ENSDARG00000058358, ENSDARG00000109279 198.08 1484.89 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
93. fkbp1aa ENSDARG00000022684 196.01 1469.37 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
94. rplp0 ENSDARG00000051783 196.01 1469.37 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
95. cirbp cirbp 193.95 1453.93
96. mt-co1 ENSDARG00000063905 193.95 1453.93 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
97. ran ENSDARG00000057026 193.95 1453.93 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
98. rpl14 ENSDARG00000103433 191.89 1438.48 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
99. rps13 ENSDARG00000036298, ENSDARG00000112818 191.89 1438.48 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
100. tpm3 ENSDARG00000005162 191.89 1438.48 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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