Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole1, section s52.

Sample reads: 133,405. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 18316.41 137305.63
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4362.02 32699.09 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. mt-nd2 ENSDARG00000063899 1424.79 10680.68 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
4. tmsb4x ENSDARG00000077777 1339.18 10038.92 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
5. mt-co2 ENSDARG00000063908 1208.73 9061.02 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. mt-atp6 ENSDARG00000063911 1070.12 8021.96 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
7. si:dkey-151g10.6 si:dkey-151g10.6 1059.93 7945.57
8. mt-nd4 ENSDARG00000063917 1033.43 7746.92 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
9. actb2 ENSDARG00000037870 962.09 7212.13 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
10. zgc:112425 zgc:112425 807.18 6050.88
11. ppiaa ENSDARG00000009212 790.87 5928.61 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
12. eef1a1l1 ENSDARG00000020850 699.15 5241.05 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
13. mt-nd1 ENSDARG00000063895 684.88 5134.08 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
14. rpl10a ENSDARG00000042905, ENSDARG00000115649 658.38 4935.43 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
15. actb1 ENSDARG00000037746, ENSDARG00000113649 642.07 4813.16 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
16. mt-co3 ENSDARG00000063912 615.57 4614.51 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
17. tpma ENSDARG00000033683 603.34 4522.83 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
18. hmga1a ENSDARG00000028335 589.08 4415.93 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
19. rpl21 ENSDARG00000010516, ENSDARG00000110263 517.74 3881.14 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
20. rps14 ENSDARG00000036629 507.54 3804.68 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
21. rpl18a ENSDARG00000025073 499.39 3743.59 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
22. myl10 ENSDARG00000062592 491.24 3682.49 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
23. zgc:66286 zgc:66286 468.82 3514.42
24. acta1a ENSDARG00000036371 466.78 3499.13 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
25. rpl23 ENSDARG00000053457 458.62 3437.96 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
26. efemp2a ENSDARG00000094324 448.43 3361.57 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
27. mt-cyb ENSDARG00000063924 444.36 3331.06 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
28. rps26l ENSDARG00000030408 442.32 3315.77 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
29. hspa8 ENSDARG00000068992, ENSDARG00000114726 428.05 3208.80 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
30. rpl26 ENSDARG00000102317 419.90 3147.70 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
31. rps23 ENSDARG00000021838 419.90 3147.70 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
32. eef2b ENSDARG00000100371, ENSDARG00000109247 409.70 3071.24 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
33. rpl36 ENSDARG00000100588 409.70 3071.24 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
34. zgc:92533 zgc:92533 399.51 2994.85
35. btf3 ENSDARG00000035400, ENSDARG00000116462 395.44 2964.34 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
36. rpl8 ENSDARG00000014867 395.44 2964.34 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
37. rpl36a ENSDARG00000058105, ENSDARG00000112656 391.36 2933.76 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
38. ptmab ENSDARG00000101766 368.94 2765.69 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
39. fabp3 ENSDARG00000023290 342.44 2567.04 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
40. id1 ENSDARG00000040764 330.21 2475.36 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
41. rpl11 ENSDARG00000043509 330.21 2475.36 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
42. rpl9 ENSDARG00000037350, ENSDARG00000112384 330.21 2475.36 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
43. cyt1l ENSDARG00000036832 326.13 2444.77 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
44. rplp1 ENSDARG00000021864 326.13 2444.77 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
45. rps15 ENSDARG00000070849, ENSDARG00000110979 322.06 2414.26 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
46. rpl27 ENSDARG00000015128 317.98 2383.68 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
47. rpl19 ENSDARG00000013307 315.94 2368.39 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
48. rps27a ENSDARG00000032725, ENSDARG00000114059 315.94 2368.39 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
49. hsp90aa1.1 ENSDARG00000010478 311.86 2337.80 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
50. rpl7 ENSDARG00000007320 299.63 2246.12 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
51. rps15a ENSDARG00000010160 287.40 2154.44 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
52. si:dkeyp-86f7.3 si:dkeyp-86f7.3 287.40 2154.44
53. cirbp cirbp 285.37 2139.22
54. eif5a ENSDARG00000017235 283.33 2123.93 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
55. rps19 ENSDARG00000030602 283.33 2123.93 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
56. rps2 ENSDARG00000077291 283.33 2123.93 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
57. rps27.1 ENSDARG00000023298 281.29 2108.64 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
58. RPL29 ENSDARG00000077717 279.25 2093.35 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
59. pcna ENSDARG00000054155 279.25 2093.35 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
60. rpl6 ENSDARG00000058451 279.25 2093.35 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
61. rps6 ENSDARG00000019778 277.21 2078.05 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
62. rpl18 ENSDARG00000029533 273.14 2047.54 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
63. rpl15 ENSDARG00000009285 269.06 2016.96 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
64. rps5 ENSDARG00000043453 264.98 1986.37 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
65. tnnc2 ENSDARG00000070835, ENSDARG00000111155 260.91 1955.86 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
66. mt-co1 ENSDARG00000063905 258.87 1940.57 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
67. ckmb ENSDARG00000040565 254.79 1909.99 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
68. rps4x ENSDARG00000014690 254.79 1909.99 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
69. rpl35 ENSDARG00000018334 252.75 1894.69 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
70. rps9 ENSDARG00000011405, ENSDARG00000113248 250.71 1879.40 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
71. cfl1 ENSDARG00000021124 242.56 1818.31 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
72. rps20 ENSDARG00000036044 236.45 1772.50 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
73. rps3 ENSDARG00000103007 236.45 1772.50 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
74. rplp0 ENSDARG00000051783 232.37 1741.92 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
75. rpsa ENSDARG00000019181 232.37 1741.92 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
76. cfl1l ENSDARG00000012972 230.33 1726.63 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
77. hsp90ab1 ENSDARG00000029150 226.25 1696.04 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
78. krt8 ENSDARG00000058358, ENSDARG00000109279 226.25 1696.04 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
79. rpl5b ENSDARG00000015862, ENSDARG00000109661 226.25 1696.04 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
80. actc1b ENSDARG00000099197 222.18 1665.53 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
81. zgc:123194 zgc:123194 222.18 1665.53
82. AL954137.2 ENSDARG00000114408 220.14 1650.24
83. rps10 ENSDARG00000034897 218.10 1634.95 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
84. rpl39 ENSDARG00000036316, ENSDARG00000117167 211.99 1589.14 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
85. COX5B_1 ENSDARG00000015978 209.95 1573.85 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
86. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 209.95 1573.85 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
87. rpl30 ENSDARG00000035871, ENSDARG00000109253 209.95 1573.85 ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
88. rpl28 ENSDARG00000005791 207.91 1558.56 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
89. rps7 ENSDARG00000042566 203.83 1527.97 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
90. rpl23a ENSDARG00000006316 201.79 1512.68 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
91. npm1a ENSDARG00000014329, ENSDARG00000113199 197.72 1482.17 nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
92. rpl31 ENSDARG00000053365 195.68 1466.88 ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
93. tpm3 ENSDARG00000005162 193.64 1451.59 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
94. h3f3a 185.49 1390.49 H3 histone, family 3A, transcript variant X1
95. pabpc1a ENSDARG00000017219 185.49 1390.49 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
96. rps18 ENSDARG00000100392 183.45 1375.20 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
97. rplp2l ENSDARG00000011201 181.41 1359.91 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
98. rpl24 ENSDARG00000099104 179.37 1344.61 ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
99. rps12 ENSDARG00000036875, ENSDARG00000115157 179.37 1344.61 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
100. tpm2 ENSDARG00000104682 179.37 1344.61 tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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