Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole1, section s50.

Sample reads: 133,378. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 17016.20 127580.55
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3285.03 24629.82 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. mt-nd2 ENSDARG00000063899 1413.58 10598.45 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
4. mt-co2 ENSDARG00000063908 1338.65 10036.65 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. tmsb4x ENSDARG00000077777 1245.41 9337.58 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
6. mt-nd4 ENSDARG00000063917 1187.14 8900.69 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
7. mt-atp6 ENSDARG00000063911 1148.84 8613.54 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
8. si:dkey-151g10.6 si:dkey-151g10.6 1148.84 8613.54
9. tpma ENSDARG00000033683 925.73 6940.75 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
10. ppiaa ENSDARG00000009212 882.45 6616.25 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
11. zgc:112425 zgc:112425 852.48 6391.55
12. eef1a1l1 ENSDARG00000020850 822.51 6166.85 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
13. actb2 ENSDARG00000037870 747.58 5605.05 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
14. mt-nd1 ENSDARG00000063895 684.31 5130.68 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
15. mt-co3 ENSDARG00000063912 631.03 4731.21 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
16. hmga1a ENSDARG00000028335 596.07 4469.09 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
17. mt-cyb ENSDARG00000063924 574.42 4306.77 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
18. rpl23 ENSDARG00000053457 544.45 4082.06 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
19. myl10 ENSDARG00000062592 542.79 4069.62 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
20. rpl10a ENSDARG00000042905, ENSDARG00000115649 542.79 4069.62 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
21. actb1 ENSDARG00000037746, ENSDARG00000113649 527.80 3957.23 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
22. rpl21 ENSDARG00000010516, ENSDARG00000110263 511.15 3832.39 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
23. zgc:66286 zgc:66286 507.82 3807.43
24. acta1a ENSDARG00000036371 474.52 3557.76 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
25. rps26l ENSDARG00000030408 474.52 3557.76 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
26. rpl8 ENSDARG00000014867 472.86 3545.31 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
27. rpl18a ENSDARG00000025073 461.20 3457.89 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
28. eef2b ENSDARG00000100371, ENSDARG00000109247 454.54 3407.96 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
29. btf3 ENSDARG00000035400, ENSDARG00000116462 434.56 3258.15 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
30. rps23 ENSDARG00000021838 434.56 3258.15 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
31. rps14 ENSDARG00000036629 427.90 3208.22 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
32. efemp2a ENSDARG00000094324 414.58 3108.35 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
33. rpl36a ENSDARG00000058105, ENSDARG00000112656 412.92 3095.91 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
34. hspa8 ENSDARG00000068992, ENSDARG00000114726 397.93 2983.52 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
35. rpl9 ENSDARG00000037350, ENSDARG00000112384 394.60 2958.55 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
36. rpl36 ENSDARG00000100588 391.27 2933.58 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
37. cyt1l ENSDARG00000036832 384.61 2883.65 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
38. rpl26 ENSDARG00000102317 376.29 2821.27 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
39. rps27a ENSDARG00000032725, ENSDARG00000114059 362.97 2721.40 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
40. rpl11 ENSDARG00000043509 357.97 2683.91 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
41. ptmab ENSDARG00000101766 356.31 2671.47 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
42. rps5 ENSDARG00000043453 356.31 2671.47 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
43. ckmb ENSDARG00000040565 352.98 2646.50 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
44. hsp90aa1.1 ENSDARG00000010478 352.98 2646.50 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
45. rpl19 ENSDARG00000013307 346.32 2596.57 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
46. actc1b ENSDARG00000099197 342.99 2571.60 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
47. rpl27 ENSDARG00000015128 337.99 2534.11 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
48. rps15 ENSDARG00000070849, ENSDARG00000110979 334.66 2509.14 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
49. pcna ENSDARG00000054155 331.33 2484.18 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
50. rps2 ENSDARG00000077291 328.00 2459.21 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
51. id1 ENSDARG00000040764 326.34 2446.76 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
52. rplp1 ENSDARG00000021864 321.34 2409.28 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
53. rps4x ENSDARG00000014690 314.68 2359.34 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
54. rpl7 ENSDARG00000007320 309.69 2321.93 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
55. si:dkeyp-86f7.3 si:dkeyp-86f7.3 308.02 2309.41
56. rps6 ENSDARG00000019778 298.03 2234.51 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
57. rpl35 ENSDARG00000018334 296.37 2222.06 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
58. rps9 ENSDARG00000011405, ENSDARG00000113248 296.37 2222.06 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
59. tpm3 ENSDARG00000005162 294.70 2209.54 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
60. fabp3 ENSDARG00000023290 293.04 2197.09 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
61. zgc:92533 zgc:92533 288.04 2159.61
62. RPL29 ENSDARG00000077717 283.05 2122.19 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
63. mt-co1 ENSDARG00000063905 283.05 2122.19 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
64. rps19 ENSDARG00000030602 281.38 2109.67 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
65. rpl18 ENSDARG00000029533 279.72 2097.23 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
66. tnnc2 ENSDARG00000070835, ENSDARG00000111155 279.72 2097.23 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
67. rpl15 ENSDARG00000009285 274.72 2059.74 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
68. rps20 ENSDARG00000036044 274.72 2059.74 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
69. rps10 ENSDARG00000034897 273.06 2047.29 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
70. rps27.1 ENSDARG00000023298 273.06 2047.29 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
71. rps15a ENSDARG00000010160 269.73 2022.33 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
72. rplp0 ENSDARG00000051783 266.40 1997.36 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
73. rpl6 ENSDARG00000058451 259.74 1947.42 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
74. eif5a ENSDARG00000017235 256.41 1922.46 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
75. cirbp cirbp 254.74 1909.94
76. rpl5b ENSDARG00000015862, ENSDARG00000109661 254.74 1909.94 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
77. rpl24 ENSDARG00000099104 246.42 1847.56 ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
78. krt8 ENSDARG00000058358, ENSDARG00000109279 243.09 1822.59 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
79. smyhc1 ENSDARG00000099959, ENSDARG00000115916 239.76 1797.62 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
80. atp5g3b 233.10 1747.69 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
81. rps3 ENSDARG00000103007 231.43 1735.17 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
82. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 229.77 1722.72 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
83. cfl1 ENSDARG00000021124 228.10 1710.20 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
84. AL954137.2 ENSDARG00000114408 226.44 1697.76
85. npm1a ENSDARG00000014329, ENSDARG00000113199 226.44 1697.76 nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
86. rpl30 ENSDARG00000035871, ENSDARG00000109253 226.44 1697.76 ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
87. rps12 ENSDARG00000036875, ENSDARG00000115157 226.44 1697.76 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
88. ran ENSDARG00000057026 223.11 1672.79 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
89. fkbp1aa ENSDARG00000022684 218.11 1635.30 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
90. rpsa ENSDARG00000019181 218.11 1635.30 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
91. rpl14 ENSDARG00000103433 216.45 1622.85 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
92. mylz3 ENSDARG00000017441 214.78 1610.33 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
93. rpl22 ENSDARG00000070437 214.78 1610.33 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
94. ckma ENSDARG00000035327, ENSDARG00000114671 211.45 1585.37 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
95. rpl39 ENSDARG00000036316, ENSDARG00000117167 211.45 1585.37 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
96. COX5B_1 ENSDARG00000015978 209.79 1572.92 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
97. hsp90ab1 ENSDARG00000029150 206.46 1547.95 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
98. rps24 ENSDARG00000039347 204.79 1535.43 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
99. faua ENSDARG00000099022 203.13 1522.99 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
100. rpl23a ENSDARG00000006316 201.46 1510.47 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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