Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole1, section s49.

Sample reads: 133,407. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 22925.85 171859.57
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3506.90 26288.85 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. mt-nd2 ENSDARG00000063899 1654.20 12400.42 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
4. tmsb4x ENSDARG00000077777 1426.58 10694.10 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
5. mt-co2 ENSDARG00000063908 1397.47 10475.89 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. mt-atp6 ENSDARG00000063911 1363.06 10217.94 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
7. mt-nd4 ENSDARG00000063917 1061.33 7956.07 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
8. si:dkey-151g10.6 si:dkey-151g10.6 1053.39 7896.55
9. ppiaa ENSDARG00000009212 952.82 7142.65 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
10. tpma ENSDARG00000033683 921.06 6904.56 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
11. mt-co3 ENSDARG00000063912 770.19 5773.59 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
12. mt-nd1 ENSDARG00000063895 717.26 5376.81 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
13. zgc:112425 zgc:112425 714.61 5356.95
14. actb2 ENSDARG00000037870 587.57 4404.61 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
15. rpl10a ENSDARG00000042905, ENSDARG00000115649 574.34 4305.44 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
16. myl10 ENSDARG00000062592 555.81 4166.53 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
17. rps23 ENSDARG00000021838 539.93 4047.49 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
18. actb1 ENSDARG00000037746, ENSDARG00000113649 526.70 3948.31 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
19. rpl8 ENSDARG00000014867 526.70 3948.31 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
20. rpl23 ENSDARG00000053457 521.40 3908.58 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
21. hmga1a ENSDARG00000028335 513.46 3849.06 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
22. mt-cyb ENSDARG00000063924 513.46 3849.06 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
23. eef1a1l1 ENSDARG00000020850 502.88 3769.75 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
24. rpl21 ENSDARG00000010516, ENSDARG00000110263 487.00 3650.71 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
25. btf3 ENSDARG00000035400, ENSDARG00000116462 484.35 3630.84 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
26. rpl26 ENSDARG00000102317 476.41 3571.32 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
27. rpl36a ENSDARG00000058105, ENSDARG00000112656 471.12 3531.67 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
28. rps26l ENSDARG00000030408 471.12 3531.67 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
29. rpl18a ENSDARG00000025073 468.47 3511.80 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
30. hspa8 ENSDARG00000068992, ENSDARG00000114726 452.59 3392.76 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
31. zgc:92533 zgc:92533 423.47 3174.47
32. rps14 ENSDARG00000036629 415.53 3114.95 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
33. hsp90aa1.1 ENSDARG00000010478 397.01 2976.12 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
34. acta1a ENSDARG00000036371 389.07 2916.59 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
35. rps15 ENSDARG00000070849, ENSDARG00000110979 383.77 2876.86 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
36. rpl36 ENSDARG00000100588 370.54 2777.69 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
37. cyt1l ENSDARG00000036832 367.89 2757.82 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
38. si:dkeyp-86f7.3 si:dkeyp-86f7.3 367.89 2757.82
39. ckmb ENSDARG00000040565 359.95 2698.30 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
40. rps27a ENSDARG00000032725, ENSDARG00000114059 354.66 2658.65 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
41. rpl35 ENSDARG00000018334 344.07 2579.26 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
42. zgc:66286 zgc:66286 344.07 2579.26
43. rps4x ENSDARG00000014690 341.43 2559.47 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
44. rps15a ENSDARG00000010160 333.49 2499.95 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
45. ptmab ENSDARG00000101766 330.84 2480.08 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
46. rps6 ENSDARG00000019778 325.55 2440.43 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
47. rplp1 ENSDARG00000021864 322.90 2420.56 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
48. rpl27 ENSDARG00000015128 312.31 2341.18 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
49. rpl9 ENSDARG00000037350, ENSDARG00000112384 312.31 2341.18 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
50. fabp3 ENSDARG00000023290 307.02 2301.52 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
51. rpl11 ENSDARG00000043509 299.08 2242.00 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
52. rpl7 ENSDARG00000007320 291.14 2182.48 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
53. tnnc2 ENSDARG00000070835, ENSDARG00000111155 288.49 2162.61 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
54. rpl19 ENSDARG00000013307 285.85 2142.82 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
55. rps19 ENSDARG00000030602 285.85 2142.82 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
56. efemp2a ENSDARG00000094324 283.20 2122.96 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
57. eef2b ENSDARG00000100371, ENSDARG00000109247 277.91 2083.30 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
58. rpl18 ENSDARG00000029533 275.26 2063.44 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
59. RPL29 ENSDARG00000077717 269.96 2023.71 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
60. hbbe3 ENSDARG00000038147, ENSDARG00000109344 269.96 2023.71 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
61. rpl5b ENSDARG00000015862, ENSDARG00000109661 267.32 2003.92 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
62. rps27.1 ENSDARG00000023298 259.38 1944.40 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
63. mt-co1 ENSDARG00000063905 254.08 1904.67 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
64. mylz3 ENSDARG00000017441 251.44 1884.88 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
65. rps5 ENSDARG00000043453 251.44 1884.88 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
66. pcna ENSDARG00000054155 248.79 1865.01 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
67. rpl14 ENSDARG00000103433 246.14 1845.14 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
68. rpl15 ENSDARG00000009285 246.14 1845.14 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
69. tpm3 ENSDARG00000005162 243.50 1825.35 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
70. cfl1l ENSDARG00000012972 240.85 1805.49 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
71. si:dkey-150i13.2 ENSDARG00000071052 238.20 1785.62 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
72. id1 ENSDARG00000040764 235.56 1765.83 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
73. rpl24 ENSDARG00000099104 227.62 1706.31 ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
74. rpl6 ENSDARG00000058451 227.62 1706.31 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
75. rps7 ENSDARG00000042566 227.62 1706.31 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
76. rps9 ENSDARG00000011405, ENSDARG00000113248 224.97 1686.45 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
77. cirbp cirbp 222.32 1666.58
78. hbae3 ENSDARG00000079305 219.68 1646.79 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
79. ran ENSDARG00000057026 219.68 1646.79 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
80. rplp2l ENSDARG00000011201 219.68 1646.79 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
81. rpl30 ENSDARG00000035871, ENSDARG00000109253 217.03 1626.93 ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
82. krt8 ENSDARG00000058358, ENSDARG00000109279 214.38 1607.06 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
83. npm1a ENSDARG00000014329, ENSDARG00000113199 211.74 1587.27 nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
84. rps2 ENSDARG00000077291 211.74 1587.27 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
85. rpsa ENSDARG00000019181 211.74 1587.27 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
86. rps10 ENSDARG00000034897 206.44 1547.54 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
87. fkbp1aa ENSDARG00000022684 198.50 1488.02 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
88. rps24 ENSDARG00000039347 198.50 1488.02 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
89. rpl35a ENSDARG00000088030 195.86 1468.23 ribosomal protein L35a [Source:ZFIN;Acc:ZDB-GENE-040718-190]
90. rps3 ENSDARG00000103007 195.86 1468.23 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
91. smyhc1 ENSDARG00000099959, ENSDARG00000115916 193.21 1448.36 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
92. ttnb ttnb 193.21 1448.36
93. AL954137.2 ENSDARG00000114408 190.56 1428.50
94. rpl23a ENSDARG00000006316 190.56 1428.50 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
95. rps20 ENSDARG00000036044 190.56 1428.50 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
96. cfl1 ENSDARG00000021124 187.92 1408.71 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
97. faua ENSDARG00000099022 187.92 1408.71 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
98. rps12 ENSDARG00000036875, ENSDARG00000115157 187.92 1408.71 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
99. RPL37A RPL37A 182.62 1368.98
100. cox8a ENSDARG00000095273 182.62 1368.98 cytochrome c oxidase subunit 8A [Source:ZFIN;Acc:ZDB-GENE-030131-9136]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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