Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole1, section s43.

Sample reads: 133,423. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 21058.78 157836.68
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3196.20 23955.69 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. mt-nd2 ENSDARG00000063899 1595.42 11957.76 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
4. tpma ENSDARG00000033683 1583.94 11871.71 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
5. mt-co2 ENSDARG00000063908 1394.18 10449.45 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. mt-atp6 ENSDARG00000063911 1303.88 9772.65 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
7. mt-nd4 ENSDARG00000063917 1199.82 8992.72 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
8. tmsb4x ENSDARG00000077777 1098.05 8229.94 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
9. ckmb ENSDARG00000040565 980.21 7346.73 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
10. apoa1b ENSDARG00000101324 875.38 6561.02 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
11. si:dkey-151g10.6 si:dkey-151g10.6 824.87 6182.44
12. mt-nd1 ENSDARG00000063895 815.69 6113.64 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
13. actb2 ENSDARG00000037870 741.47 5557.36 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
14. mt-co3 ENSDARG00000063912 680.25 5098.51 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
15. apoc1l apoc1l 676.43 5069.88
16. eef1a1l1 ENSDARG00000020850 673.37 5046.94 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. apoa2 ENSDARG00000015866 651.18 4880.63 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
18. zgc:161979_1 zgc:161979_1 602.20 4513.52
19. ppiaa ENSDARG00000009212 596.08 4467.65 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
20. zgc:112425 zgc:112425 568.54 4261.24
21. zgc:161979 zgc:161979 567.77 4255.47
22. ckma ENSDARG00000035327, ENSDARG00000114671 554.76 4157.96 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
23. actc1b ENSDARG00000099197 522.62 3917.06 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
24. mt-cyb ENSDARG00000063924 504.26 3779.46 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
25. apobb apobb 495.08 3710.65
26. apoeb ENSDARG00000040295 487.43 3653.31 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
27. acta1a ENSDARG00000036371 476.71 3572.97 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
28. rpl10a ENSDARG00000042905, ENSDARG00000115649 475.95 3567.27 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
29. atp2a1 ENSDARG00000020574 471.36 3532.87 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
30. hmga1a ENSDARG00000028335 456.82 3423.89 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
31. mylz3 ENSDARG00000017441 441.51 3309.14 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
32. actb1 ENSDARG00000037746, ENSDARG00000113649 436.16 3269.04 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
33. rpl23 ENSDARG00000053457 432.33 3240.34 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
34. eef2b ENSDARG00000100371, ENSDARG00000109247 414.73 3108.42 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
35. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 400.96 3005.22 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
36. tnnc2 ENSDARG00000070835, ENSDARG00000111155 392.54 2942.11 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
37. rpl18a ENSDARG00000025073 391.78 2936.41 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
38. hspa8 ENSDARG00000068992, ENSDARG00000114726 373.41 2798.73 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
39. rpl21 ENSDARG00000010516, ENSDARG00000110263 363.47 2724.23 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
40. zgc:66286 zgc:66286 361.17 2706.99
41. myl10 ENSDARG00000062592 358.87 2689.75 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
42. rpl8 ENSDARG00000014867 345.87 2592.31 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
43. btf3 ENSDARG00000035400, ENSDARG00000116462 340.51 2552.14 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
44. rps23 ENSDARG00000021838 320.61 2402.99 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
45. rps14 ENSDARG00000036629 314.49 2357.12 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
46. hsp90aa1.1 ENSDARG00000010478 310.67 2328.49 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
47. rps26l ENSDARG00000030408 302.25 2265.38 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
48. rpl36a ENSDARG00000058105, ENSDARG00000112656 299.95 2248.14 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
49. rpl36 ENSDARG00000100588 299.19 2242.45 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
50. rpl26 ENSDARG00000102317 295.36 2213.74 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
51. myhz1.3 ENSDARG00000067997 284.65 2133.47 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
52. rpl9 ENSDARG00000037350, ENSDARG00000112384 284.65 2133.47 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
53. ttna ttna 284.65 2133.47
54. rps27a ENSDARG00000032725, ENSDARG00000114059 280.06 2099.06 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
55. fabp3 ENSDARG00000023290 278.53 2087.60 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
56. mt-co1 ENSDARG00000063905 277.76 2081.83 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
57. apoa1a ENSDARG00000012076, ENSDARG00000110395 269.35 2018.79 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
58. ttnb ttnb 252.51 1892.58
59. si:dkeyp-86f7.3 si:dkeyp-86f7.3 247.92 1858.17
60. eif5a ENSDARG00000017235 247.16 1852.48 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
61. rpl11 ENSDARG00000043509 247.16 1852.48 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
62. cyt1l ENSDARG00000036832 242.57 1818.08 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
63. zgc:92533 zgc:92533 241.80 1812.30
64. acta1b ENSDARG00000055618 239.50 1795.07 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
65. rpl19 ENSDARG00000013307 236.44 1772.13 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
66. rps15 ENSDARG00000070849, ENSDARG00000110979 234.91 1760.66 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
67. rplp1 ENSDARG00000021864 231.85 1737.73 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
68. rps2 ENSDARG00000077291 231.85 1737.73 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
69. si:dkey-150i13.2 ENSDARG00000071052 228.03 1709.10 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
70. ptmab ENSDARG00000101766 225.73 1691.86 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
71. id1 ENSDARG00000040764 224.97 1686.16 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
72. aldoab ENSDARG00000034470 221.14 1657.46 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
73. myhz2 ENSDARG00000012944 219.61 1645.99 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
74. tpm3 ENSDARG00000005162 215.78 1617.28 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
75. rpl18 ENSDARG00000029533 214.25 1605.82 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
76. rpl27 ENSDARG00000015128 212.72 1594.35 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
77. apoa4 apoa4 208.90 1565.72
78. rpl7 ENSDARG00000007320 207.37 1554.25 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
79. rps15a ENSDARG00000010160 204.31 1531.31 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
80. atp5g3b 203.54 1525.54 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
81. lama2 ENSDARG00000099390 201.24 1508.30 laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
82. rps6 ENSDARG00000019778 201.24 1508.30 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
83. zgc:153129 zgc:153129 200.48 1502.61
84. rps5 ENSDARG00000043453 199.71 1496.84 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
85. RPL29 ENSDARG00000077717 197.42 1479.67 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
86. rps4x ENSDARG00000014690 196.65 1473.90 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
87. hsp90ab1 ENSDARG00000029150 194.36 1456.74 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
88. AL954137.2 ENSDARG00000114408 190.53 1428.03
89. rplp0 ENSDARG00000051783 190.53 1428.03 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
90. myl1 ENSDARG00000014196 189.77 1422.34 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
91. rpl6 ENSDARG00000058451 189.00 1416.57 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
92. rps20 ENSDARG00000036044 189.00 1416.57 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
93. pabpc1a ENSDARG00000017219 182.88 1370.70 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
94. rps3 ENSDARG00000103007 182.12 1365.00 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
95. rpl15 ENSDARG00000009285 181.35 1359.23 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
96. rpl35 ENSDARG00000018334 179.05 1341.99 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
97. rps19 ENSDARG00000030602 179.05 1341.99 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
98. rps12 ENSDARG00000036875, ENSDARG00000115157 174.46 1307.59 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
99. rpl39 ENSDARG00000036316, ENSDARG00000117167 172.93 1296.12 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
100. rps9 ENSDARG00000011405, ENSDARG00000113248 172.93 1296.12 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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