Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole1, section s40.

Sample reads: 133,404. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 14700.83 110200.33
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3047.87 22847.44 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. mt-co2 ENSDARG00000063908 2008.04 15052.67 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
4. mt-nd2 ENSDARG00000063899 1987.38 14897.79 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
5. tpma ENSDARG00000033683 1896.48 14216.39 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
6. mt-atp6 ENSDARG00000063911 1671.99 12533.57 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
7. tmsb4x ENSDARG00000077777 1662.35 12461.30 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
8. mt-nd4 ENSDARG00000063917 1240.91 9302.11 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
9. ckmb ENSDARG00000040565 1126.60 8445.22 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
10. mt-nd1 ENSDARG00000063895 993.00 7443.72 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
11. apoa1b ENSDARG00000101324 961.32 7206.24 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
12. mt-co3 ENSDARG00000063912 873.18 6545.53 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
13. si:dkey-151g10.6 si:dkey-151g10.6 841.50 6308.05
14. apoc1l apoc1l 834.62 6256.48
15. zgc:161979_1 zgc:161979_1 822.22 6163.52
16. zgc:161979 zgc:161979 757.49 5678.29
17. apoa2 ENSDARG00000015866 756.11 5667.95 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
18. eef1a1l1 ENSDARG00000020850 701.02 5254.98 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
19. mylz3 ENSDARG00000017441 680.36 5100.11 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
20. ppiaa ENSDARG00000009212 667.97 5007.24 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
21. actb2 ENSDARG00000037870 659.71 4945.32 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
22. actc1b ENSDARG00000099197 656.95 4924.63 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
23. acta1a ENSDARG00000036371 600.48 4501.32 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
24. mt-cyb ENSDARG00000063924 589.47 4418.78 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
25. ckma ENSDARG00000035327, ENSDARG00000114671 586.71 4398.09 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
26. rps26l ENSDARG00000030408 570.18 4274.18 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
27. zgc:112425 zgc:112425 537.13 4026.43
28. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 526.11 3943.82 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
29. tnnc2 ENSDARG00000070835, ENSDARG00000111155 519.23 3892.25 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
30. apobb apobb 515.09 3861.22
31. atp2a1 ENSDARG00000020574 510.96 3830.26 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
32. rpl10a ENSDARG00000042905, ENSDARG00000115649 508.21 3809.64 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
33. apoeb ENSDARG00000040295 490.30 3675.39 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
34. rpl23 ENSDARG00000053457 487.55 3654.77 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
35. rpl18a ENSDARG00000025073 469.64 3520.51 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
36. actb1 ENSDARG00000037746, ENSDARG00000113649 425.57 3190.16 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
37. rpl21 ENSDARG00000010516, ENSDARG00000110263 422.82 3169.54 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
38. eef2b ENSDARG00000100371, ENSDARG00000109247 420.06 3148.85 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
39. myl10 ENSDARG00000062592 414.55 3107.55 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
40. zgc:66286 zgc:66286 398.03 2983.71
41. btf3 ENSDARG00000035400, ENSDARG00000116462 381.50 2859.80 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
42. hmga1a ENSDARG00000028335 375.99 2818.50 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
43. rpl36a ENSDARG00000058105, ENSDARG00000112656 373.24 2797.88 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
44. rps15 ENSDARG00000070849, ENSDARG00000110979 362.22 2715.27 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
45. apoa1a ENSDARG00000012076, ENSDARG00000110395 359.46 2694.58 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
46. rpl8 ENSDARG00000014867 359.46 2694.58 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
47. myhz1.3 ENSDARG00000067997 356.71 2673.97 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
48. hspa8 ENSDARG00000068992, ENSDARG00000114726 355.33 2663.62 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
49. rplp1 ENSDARG00000021864 342.94 2570.75 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
50. rps23 ENSDARG00000021838 336.05 2519.10 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
51. rps14 ENSDARG00000036629 331.92 2488.14 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
52. rpl36 ENSDARG00000100588 330.54 2477.79 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
53. rps20 ENSDARG00000036044 330.54 2477.79 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
54. rps27a ENSDARG00000032725, ENSDARG00000114059 315.39 2364.23 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
55. RPL29 ENSDARG00000077717 308.51 2312.65 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
56. ttna ttna 307.13 2302.31
57. hsp90aa1.1 ENSDARG00000010478 304.37 2281.62 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
58. rpl35 ENSDARG00000018334 298.86 2240.31 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
59. rpl26 ENSDARG00000102317 290.60 2178.40 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
60. zgc:92533 zgc:92533 290.60 2178.40
61. rps15a ENSDARG00000010160 289.22 2168.05 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
62. rpl9 ENSDARG00000037350, ENSDARG00000112384 287.85 2157.78 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
63. fabp3 ENSDARG00000023290 285.09 2137.09 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
64. rpl19 ENSDARG00000013307 285.09 2137.09 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
65. rps5 ENSDARG00000043453 283.71 2126.75 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
66. cyt1l ENSDARG00000036832 279.58 2095.79 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
67. acta1b ENSDARG00000055618 276.83 2075.17 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
68. eif5a ENSDARG00000017235 268.56 2013.18 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
69. mt-co1 ENSDARG00000063905 261.68 1961.61 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
70. aldoab ENSDARG00000034470 258.92 1940.92 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
71. myhz2 ENSDARG00000012944 258.92 1940.92 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
72. rpl6 ENSDARG00000058451 257.55 1930.65 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
73. rpl11 ENSDARG00000043509 253.42 1899.69 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
74. zgc:153129 zgc:153129 249.28 1868.65
75. rpl27 ENSDARG00000015128 247.91 1858.38 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
76. rps6 ENSDARG00000019778 247.91 1858.38 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
77. si:dkey-150i13.2 ENSDARG00000071052 247.91 1858.38 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
78. tnni2b.1 ENSDARG00000035958 236.89 1775.77 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
79. si:dkeyp-86f7.3 si:dkeyp-86f7.3 234.13 1755.08
80. rpl39 ENSDARG00000036316, ENSDARG00000117167 232.76 1744.82 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
81. tpm3 ENSDARG00000005162 228.62 1713.78 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
82. apoa4 apoa4 227.25 1703.51
83. rps2 ENSDARG00000077291 227.25 1703.51 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
84. rps3 ENSDARG00000103007 227.25 1703.51 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
85. smyhc1 ENSDARG00000099959, ENSDARG00000115916 225.87 1693.17 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
86. rps24 ENSDARG00000039347 224.49 1682.82 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
87. rbp4 ENSDARG00000101199 223.12 1672.55 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
88. ttnb ttnb 220.36 1651.86
89. rpl18 ENSDARG00000029533 218.98 1641.52 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
90. rpl5b ENSDARG00000015862, ENSDARG00000109661 218.98 1641.52 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
91. rplp0 ENSDARG00000051783 217.61 1631.25 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
92. atp5g3b 216.23 1620.90 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
93. fabp2 ENSDARG00000006427, ENSDARG00000110230 216.23 1620.90 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
94. rpl28 ENSDARG00000005791 216.23 1620.90 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
95. COX5B_1 ENSDARG00000015978 212.10 1589.94 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
96. rps12 ENSDARG00000036875, ENSDARG00000115157 212.10 1589.94 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
97. tnni2a.4 ENSDARG00000029069 203.83 1527.95 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
98. lama2 ENSDARG00000099390 194.19 1455.69 laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
99. rplp2l ENSDARG00000011201 194.19 1455.69 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
100. ptmab ENSDARG00000101766 192.82 1445.42 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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