Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole1, section s34.

Sample reads: 133,405. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 20312.11 152258.61
2. tpma ENSDARG00000033683 2599.36 19484.68 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
3. krt4 ENSDARG00000017624, ENSDARG00000115790 2501.65 18752.25 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
4. ckmb ENSDARG00000040565 1846.42 13840.68 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. mt-nd2 ENSDARG00000063899 1656.75 12418.92 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. mt-atp6 ENSDARG00000063911 1616.52 12117.36 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
7. mt-co2 ENSDARG00000063908 1429.72 10717.11 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
8. ckma ENSDARG00000035327, ENSDARG00000114671 1313.33 9844.66 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
9. mt-nd4 ENSDARG00000063917 1184.01 8875.28 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
10. tmsb4x ENSDARG00000077777 1106.42 8293.67 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
11. atp2a1 ENSDARG00000020574 971.35 7281.19 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
12. actc1b ENSDARG00000099197 969.91 7270.40 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
13. mylz3 ENSDARG00000017441 831.97 6236.41 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
14. mt-co3 ENSDARG00000063912 760.12 5697.82 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
15. mt-nd1 ENSDARG00000063895 751.50 5633.21 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
16. eef1a1l1 ENSDARG00000020850 741.44 5557.80 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. si:dkey-151g10.6 si:dkey-151g10.6 728.51 5460.88
18. actb2 ENSDARG00000037870 692.59 5191.62 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
19. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 689.72 5170.11 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
20. apoa1b ENSDARG00000101324 683.97 5127.01 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
21. myhz1.3 ENSDARG00000067997 586.26 4394.58 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
22. apoc1l apoc1l 566.14 4243.76
23. zgc:161979_1 zgc:161979_1 557.52 4179.14
24. tnnc2 ENSDARG00000070835, ENSDARG00000111155 556.08 4168.35 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
25. zgc:112425 zgc:112425 553.21 4146.84
26. ttna ttna 540.28 4049.91
27. acta1a ENSDARG00000036371 523.03 3920.61 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
28. mt-cyb ENSDARG00000063924 520.16 3899.09 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
29. zgc:161979 zgc:161979 495.73 3715.97
30. ttnb ttnb 462.68 3468.23
31. ppiaa ENSDARG00000009212 459.81 3446.71 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
32. hmga1a ENSDARG00000028335 451.19 3382.10 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
33. apoa2 ENSDARG00000015866 438.26 3285.18 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
34. pvalb2 ENSDARG00000002768, ENSDARG00000114085 436.82 3274.38 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
35. eef2b ENSDARG00000100371, ENSDARG00000109247 428.20 3209.77 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
36. acta1b ENSDARG00000055618 425.32 3188.18 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
37. rpl18a ENSDARG00000025073 406.64 3048.15 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
38. rpl8 ENSDARG00000014867 406.64 3048.15 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
39. rpl10a ENSDARG00000042905, ENSDARG00000115649 405.21 3037.43 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
40. actb1 ENSDARG00000037746, ENSDARG00000113649 400.90 3005.13 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
41. zgc:66286 zgc:66286 386.53 2897.41
42. rpl23 ENSDARG00000053457 380.78 2854.31 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
43. apoeb ENSDARG00000040295 372.16 2789.69 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
44. apobb apobb 364.97 2735.80
45. rpl36 ENSDARG00000100588 329.05 2466.54 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
46. fabp3 ENSDARG00000023290 327.61 2455.75 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
47. btf3 ENSDARG00000035400, ENSDARG00000116462 318.99 2391.13 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
48. myl10 ENSDARG00000062592 316.12 2369.62 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
49. hspa8 ENSDARG00000068992, ENSDARG00000114726 311.81 2337.31 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
50. rps23 ENSDARG00000021838 296.00 2218.80 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
51. rps14 ENSDARG00000036629 294.57 2208.08 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
52. tnnt3a ENSDARG00000030270 291.69 2186.49 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
53. rpl21 ENSDARG00000010516, ENSDARG00000110263 283.07 2121.88 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
54. hsp90aa1.1 ENSDARG00000010478 273.01 2046.47 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
55. myl1 ENSDARG00000014196 273.01 2046.47 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
56. rps2 ENSDARG00000077291 264.39 1981.85 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
57. lama2 ENSDARG00000099390 262.95 1971.06 laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
58. rps15 ENSDARG00000070849, ENSDARG00000110979 255.77 1917.24 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
59. si:dkeyp-86f7.3 si:dkeyp-86f7.3 247.15 1852.62
60. rpl26 ENSDARG00000102317 245.71 1841.83 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
61. rps27a ENSDARG00000032725, ENSDARG00000114059 245.71 1841.83 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
62. tpm3 ENSDARG00000005162 244.27 1831.04 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
63. rpl11 ENSDARG00000043509 237.09 1777.22 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
64. rpl9 ENSDARG00000037350, ENSDARG00000112384 235.65 1766.42 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
65. rpl19 ENSDARG00000013307 234.22 1755.70 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
66. tnni2a.4 ENSDARG00000029069 234.22 1755.70 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
67. eif5a ENSDARG00000017235 232.78 1744.91 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
68. tnnt3b ENSDARG00000068457 229.91 1723.39 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
69. rpl36a ENSDARG00000058105, ENSDARG00000112656 227.03 1701.81 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
70. tnni2b.1 ENSDARG00000035958 222.72 1669.50 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
71. apoa1a ENSDARG00000012076, ENSDARG00000110395 218.41 1637.19 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
72. rps26l ENSDARG00000030408 216.97 1626.40 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
73. si:dkey-150i13.2 ENSDARG00000071052 211.23 1583.37 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
74. RPL29 ENSDARG00000077717 209.79 1572.58 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
75. rps3 ENSDARG00000103007 209.79 1572.58 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
76. zgc:92533 zgc:92533 209.79 1572.58
77. aldoab ENSDARG00000034470 206.91 1550.99 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
78. rpl27 ENSDARG00000015128 205.48 1540.27 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
79. rplp1 ENSDARG00000021864 193.98 1454.06 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
80. rps6 ENSDARG00000019778 193.98 1454.06 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
81. rps15a ENSDARG00000010160 192.55 1443.35 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
82. rpl15 ENSDARG00000009285 191.11 1432.55 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
83. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 189.67 1421.76 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
84. tnnt2c ENSDARG00000032242 182.49 1367.94 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
85. rps20 ENSDARG00000036044 181.05 1357.14 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
86. rpl7 ENSDARG00000007320 179.61 1346.35 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
87. gapdh ENSDARG00000043457 178.18 1335.63 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
88. rpl6 ENSDARG00000058451 178.18 1335.63 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
89. rpl35 ENSDARG00000018334 176.74 1324.83 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
90. rpl5b ENSDARG00000015862, ENSDARG00000109661 176.74 1324.83 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
91. smyhc1 ENSDARG00000099959, ENSDARG00000115916 175.30 1314.04 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
92. rps4x ENSDARG00000014690 173.87 1303.32 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
93. AL954137.2 ENSDARG00000114408 172.43 1292.53
94. pcna ENSDARG00000054155 169.55 1270.94 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
95. rpl18 ENSDARG00000029533 166.68 1249.43 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
96. tmem38a ENSDARG00000024047 166.68 1249.43 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
97. myhz2 ENSDARG00000012944 165.24 1238.63 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
98. rps9 ENSDARG00000011405, ENSDARG00000113248 163.81 1227.91 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
99. mt-co1 ENSDARG00000063905 160.93 1206.32 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
100. atp5g3b 159.50 1195.60 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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