Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_28hpf_whole1, section s30.

Sample reads: 133,410. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 18587.57 139326.86
2. tpma ENSDARG00000033683 3238.06 24271.53 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
3. krt4 ENSDARG00000017624, ENSDARG00000115790 3045.51 22828.23 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
4. ckmb ENSDARG00000040565 2082.76 15611.75 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. mt-nd2 ENSDARG00000063899 1793.93 13446.76 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. mt-atp6 ENSDARG00000063911 1777.89 13326.53 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
7. ckma ENSDARG00000035327, ENSDARG00000114671 1668.77 12508.60 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
8. mt-co2 ENSDARG00000063908 1351.06 10127.14 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
9. tmsb4x ENSDARG00000077777 1290.09 9670.13 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
10. actc1b ENSDARG00000099197 1286.88 9646.07 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
11. atp2a1 ENSDARG00000020574 1232.32 9237.10 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
12. mt-nd4 ENSDARG00000063917 1164.93 8731.97 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
13. mylz3 ENSDARG00000017441 1142.47 8563.61 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
14. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 953.13 7144.38 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
15. si:dkey-151g10.6 si:dkey-151g10.6 921.03 6903.77
16. mt-co3 ENSDARG00000063912 917.83 6879.78 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
17. actb2 ENSDARG00000037870 754.16 5652.96 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
18. mt-nd1 ENSDARG00000063895 702.81 5268.05 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
19. pvalb2 ENSDARG00000002768, ENSDARG00000114085 689.97 5171.81 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
20. eef1a1l1 ENSDARG00000020850 664.30 4979.39 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
21. tnnc2 ENSDARG00000070835, ENSDARG00000111155 641.84 4811.04 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
22. myhz1.3 ENSDARG00000067997 612.95 4594.49 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
23. zgc:112425 zgc:112425 555.19 4161.54
24. apoa1b ENSDARG00000101324 551.98 4137.48 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
25. mt-cyb ENSDARG00000063924 545.56 4089.35 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
26. eef2b ENSDARG00000100371, ENSDARG00000109247 532.72 3993.11 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
27. acta1a ENSDARG00000036371 519.89 3896.94 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
28. rpl10a ENSDARG00000042905, ENSDARG00000115649 510.26 3824.76 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
29. ttna ttna 487.80 3656.40
30. acta1b ENSDARG00000055618 455.70 3415.79 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
31. rpl18a ENSDARG00000025073 455.70 3415.79 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
32. rpl23 ENSDARG00000053457 452.49 3391.73 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
33. actb1 ENSDARG00000037746, ENSDARG00000113649 426.82 3199.31 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
34. apoc1l apoc1l 410.77 3079.01
35. ppiaa ENSDARG00000009212 410.77 3079.01 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
36. hspa8 ENSDARG00000068992, ENSDARG00000114726 394.73 2958.78 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
37. ttnb ttnb 394.73 2958.78
38. zgc:161979_1 zgc:161979_1 381.89 2862.53
39. fabp3 ENSDARG00000023290 375.47 2814.41 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
40. hmga1a ENSDARG00000028335 375.47 2814.41 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
41. tnnt3a ENSDARG00000030270 369.06 2766.36 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
42. myl1 ENSDARG00000014196 365.85 2742.30 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
43. rps27a ENSDARG00000032725, ENSDARG00000114059 343.38 2573.87 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
44. zgc:66286 zgc:66286 340.17 2549.81
45. rpl8 ENSDARG00000014867 336.96 2525.75 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
46. myl10 ENSDARG00000062592 333.75 2501.69 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
47. apoa2 ENSDARG00000015866 324.13 2429.58 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
48. apoeb ENSDARG00000040295 317.71 2381.46 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
49. btf3 ENSDARG00000035400, ENSDARG00000116462 317.71 2381.46 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
50. aldoab ENSDARG00000034470 308.08 2309.28 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
51. zgc:161979 zgc:161979 308.08 2309.28
52. rps23 ENSDARG00000021838 304.87 2285.21 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
53. tnni2a.4 ENSDARG00000029069 301.66 2261.15 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
54. rpl21 ENSDARG00000010516, ENSDARG00000110263 288.83 2164.98 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
55. rpl36 ENSDARG00000100588 282.41 2116.86 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
56. eif5a ENSDARG00000017235 275.99 2068.74 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
57. rps3 ENSDARG00000103007 275.99 2068.74 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
58. rpl9 ENSDARG00000037350, ENSDARG00000112384 272.78 2044.68 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
59. rps14 ENSDARG00000036629 272.78 2044.68 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
60. rpl36a ENSDARG00000058105, ENSDARG00000112656 266.36 1996.55 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
61. rpl26 ENSDARG00000102317 263.15 1972.49 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
62. rps15 ENSDARG00000070849, ENSDARG00000110979 263.15 1972.49 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
63. rps2 ENSDARG00000077291 247.11 1852.26 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
64. hsp90aa1.1 ENSDARG00000010478 243.90 1828.20 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
65. pabpc1a ENSDARG00000017219 243.90 1828.20 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
66. tnnt3b ENSDARG00000068457 243.90 1828.20 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
67. tpm3 ENSDARG00000005162 243.90 1828.20 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
68. atp5g1 224.64 1683.83 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
69. mt-co1 ENSDARG00000063905 224.64 1683.83 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
70. rps26l ENSDARG00000030408 224.64 1683.83 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
71. rps27.1 ENSDARG00000023298 221.43 1659.77 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
72. rpl19 ENSDARG00000013307 218.22 1635.71 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
73. rplp0 ENSDARG00000051783 215.02 1611.73 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
74. ATP5B 211.81 1587.66 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
75. rps20 ENSDARG00000036044 198.97 1491.42 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
76. apobb apobb 195.76 1467.36
77. rpl27 ENSDARG00000015128 195.76 1467.36 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
78. rpl7 ENSDARG00000007320 195.76 1467.36 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
79. pvalb1 ENSDARG00000037789 192.55 1443.30 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
80. rpl11 ENSDARG00000043509 192.55 1443.30 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
81. rpl6 ENSDARG00000058451 192.55 1443.30 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
82. tnni2b.1 ENSDARG00000035958 192.55 1443.30 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
83. rps10 ENSDARG00000034897 189.34 1419.24 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
84. AL954137.2 ENSDARG00000114408 182.92 1371.11
85. apoa1a ENSDARG00000012076, ENSDARG00000110395 182.92 1371.11 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
86. cyt1l ENSDARG00000036832 182.92 1371.11 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
87. zgc:92533 zgc:92533 182.92 1371.11
88. rbfox1l ENSDARG00000021184, ENSDARG00000111700 179.71 1347.05 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
89. rpl18 ENSDARG00000029533 179.71 1347.05 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
90. rps6 ENSDARG00000019778 179.71 1347.05 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
91. faua ENSDARG00000099022 176.50 1322.99 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
92. rpl35 ENSDARG00000018334 176.50 1322.99 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
93. rpl39 ENSDARG00000036316, ENSDARG00000117167 176.50 1322.99 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
94. rps13 ENSDARG00000036298, ENSDARG00000112818 176.50 1322.99 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
95. tmem38a ENSDARG00000024047 176.50 1322.99 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
96. col1a1b ENSDARG00000035809 173.30 1299.00 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
97. ptmab ENSDARG00000101766 173.30 1299.00 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
98. rps15a ENSDARG00000010160 173.30 1299.00 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
99. lama2 ENSDARG00000099390 170.09 1274.94 laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
100. rplp1 ENSDARG00000021864 166.88 1250.88 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA