Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_28hpf_whole1, section s2.

Sample reads: 133,401. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 12243.98 91782.94
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4840.64 36286.25 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. hmga1a ENSDARG00000028335 2420.32 18143.13 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
4. zgc:112425 zgc:112425 1423.72 10672.45
5. mt-nd2 ENSDARG00000063899 1138.97 8537.91 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. mt-nd4 ENSDARG00000063917 1138.97 8537.91 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
7. tmsb4x ENSDARG00000077777 1138.97 8537.91 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
8. mt-co2 ENSDARG00000063908 996.60 7470.68 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
9. pcna ENSDARG00000054155 996.60 7470.68 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
10. actb2 ENSDARG00000037870 854.23 6403.45 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
11. eef2b ENSDARG00000100371, ENSDARG00000109247 854.23 6403.45 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
12. AL954137.2 ENSDARG00000114408 711.86 5336.22
13. eef1a1l1 ENSDARG00000020850 711.86 5336.22 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
14. fabp3 ENSDARG00000023290 711.86 5336.22 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
15. mt-nd1 ENSDARG00000063895 711.86 5336.22 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
16. ppiaa ENSDARG00000009212 711.86 5336.22 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
17. rpl10a ENSDARG00000042905, ENSDARG00000115649 711.86 5336.22 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
18. rps14 ENSDARG00000036629 711.86 5336.22 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
19. zgc:123194 zgc:123194 711.86 5336.22
20. BX511252.1 BX511252.1 569.49 4268.99
21. actb1 ENSDARG00000037746, ENSDARG00000113649 569.49 4268.99 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
22. btf3 ENSDARG00000035400, ENSDARG00000116462 569.49 4268.99 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
23. eif4g2b ENSDARG00000057167 569.49 4268.99 eukaryotic translation initiation factor 4, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6550]
24. hsp90ab1 ENSDARG00000029150 569.49 4268.99 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
25. rpl26 ENSDARG00000102317 569.49 4268.99 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
26. rpl35a ENSDARG00000088030 569.49 4268.99 ribosomal protein L35a [Source:ZFIN;Acc:ZDB-GENE-040718-190]
27. rpl36 ENSDARG00000100588 569.49 4268.99 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
28. rpl5b ENSDARG00000015862, ENSDARG00000109661 569.49 4268.99 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
29. RPL29 ENSDARG00000077717 427.12 3201.76 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
30. cyt1l ENSDARG00000036832 427.12 3201.76 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
31. eif5a2 ENSDARG00000056186 427.12 3201.76 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
32. fth1a ENSDARG00000015551 427.12 3201.76 ferritin, heavy polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-000831-2]
33. hspa8 ENSDARG00000068992, ENSDARG00000114726 427.12 3201.76 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
34. igf2bp1 ENSDARG00000061478 427.12 3201.76 insulin-like growth factor 2 mRNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1258]
35. mt-atp6 ENSDARG00000063911 427.12 3201.76 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
36. nme2b.2 ENSDARG00000099420 427.12 3201.76 NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
37. nova1 ENSDARG00000020178 427.12 3201.76 neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
38. pank1b ENSDARG00000010098 427.12 3201.76 pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
39. pbx4 ENSDARG00000052150 427.12 3201.76 pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
40. psmd14 ENSDARG00000063100 427.12 3201.76 proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
41. ran ENSDARG00000057026 427.12 3201.76 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
42. rpl21 ENSDARG00000010516, ENSDARG00000110263 427.12 3201.76 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
43. rps10 ENSDARG00000034897 427.12 3201.76 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
44. rps12 ENSDARG00000036875, ENSDARG00000115157 427.12 3201.76 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
45. rps15 ENSDARG00000070849, ENSDARG00000110979 427.12 3201.76 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
46. rps26l ENSDARG00000030408 427.12 3201.76 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
47. rps27.1 ENSDARG00000023298 427.12 3201.76 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
48. rtn4a ENSDARG00000044601, ENSDARG00000112237 427.12 3201.76 reticulon 4a [Source:ZFIN;Acc:ZDB-GENE-030710-1]
49. setb ENSDARG00000003920 427.12 3201.76 SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
50. si:dkeyp-86f7.3 si:dkeyp-86f7.3 427.12 3201.76
51. slc25a3b ENSDARG00000025566 427.12 3201.76 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1916]
52. tmed9 ENSDARG00000004261 427.12 3201.76 transmembrane p24 trafficking protein 9 [Source:ZFIN;Acc:ZDB-GENE-050417-434]
53. top1l ENSDARG00000070545 427.12 3201.76 DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
54. umps ENSDARG00000012215 427.12 3201.76 uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
55. utp6 ENSDARG00000098433, ENSDARG00000114878, ENSDARG00000116788 427.12 3201.76 UTP6, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-769]
56. ywhabb ENSDARG00000075758 427.12 3201.76 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
57. CABZ01088039.1 CABZ01088039.1 284.74 2134.46
58. RPS17L RPS17L 284.74 2134.46
59. TUBA1A ENSDARG00000001889 284.74 2134.46 tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
60. ankhd1 ENSDARG00000077860 284.74 2134.46 ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
61. ap2s1 ENSDARG00000026967 284.74 2134.46 adaptor related protein complex 2 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2174]
62. btbd10b ENSDARG00000020252 284.74 2134.46 BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
63. calm3a_1 ENSDARG00000015050, ENSDARG00000100825 284.74 2134.46 calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
64. cenpf ENSDARG00000055133 284.74 2134.46 centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
65. cfl1l ENSDARG00000012972 284.74 2134.46 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
66. cirbp cirbp 284.74 2134.46
67. clta ENSDARG00000045618, ENSDARG00000115484 284.74 2134.46 clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
68. cnot3a ENSDARG00000007135 284.74 2134.46 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
69. cox8a ENSDARG00000095273 284.74 2134.46 cytochrome c oxidase subunit 8A [Source:ZFIN;Acc:ZDB-GENE-030131-9136]
70. dld ENSDARG00000020219 284.74 2134.46 deltaD [Source:ZFIN;Acc:ZDB-GENE-990415-47]
71. dyrk1ab ENSDARG00000023814 284.74 2134.46 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
72. eif3f ENSDARG00000077533 284.74 2134.46 eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
73. eif3ja ENSDARG00000012603 284.74 2134.46 eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
74. eif5a ENSDARG00000017235 284.74 2134.46 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
75. f2rl1.2 ENSDARG00000077540 284.74 2134.46 coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
76. faua ENSDARG00000099022 284.74 2134.46 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
77. fkbp1aa ENSDARG00000022684 284.74 2134.46 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
78. flot2a ENSDARG00000004830 284.74 2134.46 flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
79. fubp1 ENSDARG00000029248 284.74 2134.46 far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
80. gspt1l ENSDARG00000098627 284.74 2134.46 G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
81. hdlbp hdlbp 284.74 2134.46
82. hmgn2 ENSDARG00000099572 284.74 2134.46 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
83. hmgn3 ENSDARG00000036754, ENSDARG00000116728 284.74 2134.46 high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
84. hnrnpa0a ENSDARG00000089302 284.74 2134.46 heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
85. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 284.74 2134.46 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
86. hnrnpub ENSDARG00000004735 284.74 2134.46 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
87. id1 ENSDARG00000040764 284.74 2134.46 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
88. inip ENSDARG00000028523 284.74 2134.46 ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
89. kansl2 ENSDARG00000056318, ENSDARG00000113311 284.74 2134.46 KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
90. khdrbs1a ENSDARG00000052856 284.74 2134.46 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
91. ldhba ENSDARG00000019644 284.74 2134.46 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
92. lfng ENSDARG00000037879 284.74 2134.46 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
93. lrp12 ENSDARG00000098845 284.74 2134.46 low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
94. marcksb ENSDARG00000008803 284.74 2134.46 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
95. mdka ENSDARG00000036036 284.74 2134.46 midkine a [Source:ZFIN;Acc:ZDB-GENE-990621-1]
96. metap1 ENSDARG00000033440, ENSDARG00000110334 284.74 2134.46 methionyl aminopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-050626-124]
97. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 284.74 2134.46 meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
98. mt-cyb ENSDARG00000063924 284.74 2134.46 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
99. ndufb9 ENSDARG00000041314, ENSDARG00000112557 284.74 2134.46 NADH:ubiquinone oxidoreductase subunit B9 [Source:ZFIN;Acc:ZDB-GENE-030131-8364]
100. nrg1 ENSDARG00000104314 284.74 2134.46 neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA