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Experiment Zebrafish_28hpf_whole1, section s17.

Sample reads: 133,415. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 33588.86 251765.42
2. krt4 ENSDARG00000017624, ENSDARG00000115790 1446.78 10844.34 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. zgc:112425 zgc:112425 1328.51 9957.85
4. mt-co2 ENSDARG00000063908 1317.51 9875.40 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. tmsb4x ENSDARG00000077777 1292.75 9689.81 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
6. mt-nd2 ENSDARG00000063899 934.49 7004.47 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
7. hmga1a ENSDARG00000028335 836.85 6272.61 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
8. mt-atp6 ENSDARG00000063911 836.85 6272.61 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
9. mt-nd4 ENSDARG00000063917 760.52 5700.48 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
10. si:dkey-151g10.6 si:dkey-151g10.6 675.94 5066.51
11. actb2 ENSDARG00000037870 589.99 4422.27 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
12. apoa1b ENSDARG00000101324 559.05 4190.36 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
13. eef1a1l1 ENSDARG00000020850 558.36 4185.19 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
14. mt-co3 ENSDARG00000063912 521.23 3906.88 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
15. ppiaa ENSDARG00000009212 518.48 3886.27 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
16. ptmab ENSDARG00000101766 478.59 3587.27 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
17. AL954137.2 ENSDARG00000114408 459.34 3442.98
18. mt-nd1 ENSDARG00000063895 418.08 3133.72 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
19. apoa2 ENSDARG00000015866 413.27 3097.67 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
20. eef2b ENSDARG00000100371, ENSDARG00000109247 410.52 3077.05 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
21. pcna ENSDARG00000054155 402.95 3020.31 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
22. hspa8 ENSDARG00000068992, ENSDARG00000114726 397.45 2979.09 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
23. rpl10a ENSDARG00000042905, ENSDARG00000115649 385.76 2891.47 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
24. zgc:161979 zgc:161979 380.95 2855.41
25. hsp90ab1 ENSDARG00000029150 379.57 2845.07 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
26. rpl36 ENSDARG00000100588 365.13 2736.83 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
27. zgc:161979_1 zgc:161979_1 357.57 2680.17
28. apobb apobb 354.82 2659.55
29. rpl23 ENSDARG00000053457 344.50 2582.20 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
30. apoc1l apoc1l 343.82 2577.10
31. rpl18a ENSDARG00000025073 335.57 2515.27 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
32. rps26l ENSDARG00000030408 328.69 2463.70 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
33. mt-cyb ENSDARG00000063924 322.50 2417.30 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
34. tpma ENSDARG00000033683 319.75 2396.69 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
35. rpl8 ENSDARG00000014867 317.69 2381.25 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
36. rps23 ENSDARG00000021838 300.50 2252.40 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
37. rps14 ENSDARG00000036629 284.68 2133.82 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
38. si:dkeyp-86f7.3 si:dkeyp-86f7.3 283.99 2128.65
39. rpl21 ENSDARG00000010516, ENSDARG00000110263 280.55 2102.86 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
40. rps27a ENSDARG00000032725, ENSDARG00000114059 277.80 2082.25 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
41. btf3 ENSDARG00000035400, ENSDARG00000116462 262.68 1968.92 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
42. rpl36a ENSDARG00000058105, ENSDARG00000112656 261.99 1963.75 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
43. cirbp cirbp 257.18 1927.69
44. actb1 ENSDARG00000037746, ENSDARG00000113649 245.49 1840.07 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
45. rpl11 ENSDARG00000043509 244.80 1834.90 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
46. rps15 ENSDARG00000070849, ENSDARG00000110979 240.67 1803.94 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
47. AC024175.17 AC024175.17 238.61 1788.50
48. si:dkey-150i13.2 ENSDARG00000071052 233.80 1752.45 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
49. rplp1 ENSDARG00000021864 233.11 1747.28 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
50. rpl26 ENSDARG00000102317 232.42 1742.10 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
51. pabpc1a ENSDARG00000017219 231.05 1731.84 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
52. rpl9 ENSDARG00000037350, ENSDARG00000112384 231.05 1731.84 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
53. cfl1 ENSDARG00000021124 230.36 1726.66 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
54. he1a 226.92 1700.88 hatching enzyme 1a, transcript variant X1
55. fabp3 ENSDARG00000023290 224.86 1685.44 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
56. ckmb ENSDARG00000040565 222.79 1669.92 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
57. rps20 ENSDARG00000036044 222.79 1669.92 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
58. khdrbs1a ENSDARG00000052856 222.11 1664.83 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
59. apoa1a ENSDARG00000012076, ENSDARG00000110395 217.29 1628.70 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
60. rps5 ENSDARG00000043453 217.29 1628.70 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
61. eif5a ENSDARG00000017235 215.23 1613.26 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
62. hbbe3 ENSDARG00000038147, ENSDARG00000109344 211.10 1582.30 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
63. rps15a ENSDARG00000010160 209.04 1566.86 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
64. si:ch1073-429i10.3 204.23 1530.81 si:ch1073-429i10.3, transcript variant X2
65. apoeb ENSDARG00000040295 203.54 1525.63 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
66. top1l ENSDARG00000070545 202.16 1515.29 DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
67. rpl27 ENSDARG00000015128 196.66 1474.07 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
68. wu:fa26c03 195.98 1468.97 wu:fa26c03
69. ran ENSDARG00000057026 195.29 1463.80 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
70. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 193.91 1453.45 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
71. zgc:123194 zgc:123194 192.54 1443.18
72. ctslb ENSDARG00000039173, ENSDARG00000074306 191.85 1438.01 cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
73. atp2a1 ENSDARG00000020574 189.79 1422.57 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
74. rpl6 ENSDARG00000058451 189.79 1422.57 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
75. rpl18 ENSDARG00000029533 187.04 1401.96 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
76. rpl5b ENSDARG00000015862, ENSDARG00000109661 186.35 1396.79 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
77. rpl22 ENSDARG00000070437 180.85 1355.56 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
78. RPL29 ENSDARG00000077717 180.16 1350.39 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
79. rpl35 ENSDARG00000018334 180.16 1350.39 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
80. h3f3a 179.47 1345.22 H3 histone, family 3A, transcript variant X1
81. rps6 ENSDARG00000019778 178.78 1340.05 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
82. rpsa ENSDARG00000019181 175.35 1314.34 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
83. rpl39 ENSDARG00000036316, ENSDARG00000117167 174.66 1309.16 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
84. hmgn2 ENSDARG00000099572 173.28 1298.82 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
85. id1 ENSDARG00000040764 172.60 1293.72 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
86. rps2 ENSDARG00000077291 171.91 1288.55 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
87. rps19 ENSDARG00000030602 171.22 1283.38 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
88. mt-co1 ENSDARG00000063905 167.78 1257.60 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
89. rps9 ENSDARG00000011405, ENSDARG00000113248 165.72 1242.15 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
90. ttnb ttnb 165.03 1236.98
91. rps12 ENSDARG00000036875, ENSDARG00000115157 162.97 1221.54 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
92. ccnd1 ENSDARG00000101637 155.41 1164.88 cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
93. hbae3 ENSDARG00000079305 151.28 1133.92 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
94. rps3 ENSDARG00000103007 151.28 1133.92 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
95. ppiab ENSDARG00000103994 150.59 1128.75 peptidylprolyl isomerase Ab (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-7459]
96. hnrnpab hnrnpab 149.22 1118.48
97. rps27.1 ENSDARG00000023298 149.22 1118.48 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
98. faua ENSDARG00000099022 147.84 1108.14 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
99. ckma ENSDARG00000035327, ENSDARG00000114671 146.47 1097.87 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
100. rplp2l ENSDARG00000011201 146.47 1097.87 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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