Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_28hpf_whole1, section s11.

Sample reads: 133,415. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 25467.56 190895.73
2. zgc:112425 zgc:112425 1578.13 11829.10
3. krt4 ENSDARG00000017624, ENSDARG00000115790 1197.38 8975.13 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
4. tmsb4x ENSDARG00000077777 1141.24 8554.33 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
5. mt-co2 ENSDARG00000063908 1004.01 7525.70 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. mt-nd2 ENSDARG00000063899 926.70 6946.21 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
7. mt-nd4 ENSDARG00000063917 918.91 6887.82 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
8. hmga1a ENSDARG00000028335 853.39 6396.71 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
9. actb2 ENSDARG00000037870 802.45 6014.88 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
10. mt-atp6 ENSDARG00000063911 764.49 5730.34 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
11. eef1a1l1 ENSDARG00000020850 740.92 5553.67 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
12. si:dkey-151g10.6 si:dkey-151g10.6 739.92 5546.18
13. AC024175.17 AC024175.17 682.79 5117.95
14. ppiaa ENSDARG00000009212 675.80 5065.56 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
15. AL954137.2 ENSDARG00000114408 644.23 4828.92
16. pcna ENSDARG00000054155 582.71 4367.79 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
17. ptmab ENSDARG00000101766 569.32 4267.42 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
18. rpl10a ENSDARG00000042905, ENSDARG00000115649 526.97 3949.98 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
19. eef2b ENSDARG00000100371, ENSDARG00000109247 489.02 3665.52 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
20. hspa8 ENSDARG00000068992, ENSDARG00000114726 469.44 3518.75 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
21. hsp90ab1 ENSDARG00000029150 462.05 3463.36 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
22. rpl23 ENSDARG00000053457 439.88 3297.18 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
23. mt-co3 ENSDARG00000063912 432.89 3244.79 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
24. mt-nd1 ENSDARG00000063895 414.71 3108.52 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
25. id1 ENSDARG00000040764 398.53 2987.24 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
26. rpl8 ENSDARG00000014867 397.53 2979.74 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
27. zgc:123194 zgc:123194 377.95 2832.98
28. rps26l ENSDARG00000030408 375.55 2814.99 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
29. rpl21 ENSDARG00000010516, ENSDARG00000110263 370.36 2776.09 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
30. rpl18a ENSDARG00000025073 356.18 2669.80 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
31. rps23 ENSDARG00000021838 353.38 2648.81 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
32. mt-cyb ENSDARG00000063924 346.59 2597.91 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
33. si:dkeyp-86f7.3 si:dkeyp-86f7.3 317.22 2377.77
34. rpl9 ENSDARG00000037350, ENSDARG00000112384 311.63 2335.87 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
35. ran ENSDARG00000057026 307.63 2305.88 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
36. rps14 ENSDARG00000036629 306.84 2299.96 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
37. hmgn2 ENSDARG00000099572 305.84 2292.47 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
38. btf3 ENSDARG00000035400, ENSDARG00000116462 297.65 2231.08 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
39. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 296.45 2222.08 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
40. cirbp cirbp 295.25 2213.09
41. pabpc1a ENSDARG00000017219 294.05 2204.09 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
42. actb1 ENSDARG00000037746, ENSDARG00000113649 292.25 2190.60 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
43. khdrbs1a ENSDARG00000052856 289.26 2168.19 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
44. fabp3 ENSDARG00000023290 287.66 2156.20 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
45. rplp1 ENSDARG00000021864 286.26 2145.70 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
46. apoa1b ENSDARG00000101324 285.86 2142.70 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
47. rpl26 ENSDARG00000102317 279.07 2091.81 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
48. rpl36 ENSDARG00000100588 278.87 2090.31 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
49. rpl36a ENSDARG00000058105, ENSDARG00000112656 276.87 2075.32 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
50. h3f3a 276.07 2069.32 H3 histone, family 3A, transcript variant X1
51. cfl1 ENSDARG00000021124 263.89 1978.03 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
52. rpl11 ENSDARG00000043509 258.49 1937.55 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
53. rps27a ENSDARG00000032725, ENSDARG00000114059 254.30 1906.14 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
54. eif5a ENSDARG00000017235 254.10 1904.64 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
55. rpl19 ENSDARG00000013307 252.30 1891.15 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
56. rps15 ENSDARG00000070849, ENSDARG00000110979 240.71 1804.28 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
57. apoa2 ENSDARG00000015866 235.32 1763.87 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
58. seta ENSDARG00000031495 229.73 1721.97 SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
59. rpl6 ENSDARG00000058451 225.13 1687.49 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
60. hnrnpab hnrnpab 222.94 1671.08
61. zgc:161979 zgc:161979 221.54 1660.58
62. rpl27 ENSDARG00000015128 220.94 1656.09 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
63. rps20 ENSDARG00000036044 214.15 1605.19 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
64. rps2 ENSDARG00000077291 213.75 1602.19 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
65. si:ch1073-429i10.3 212.95 1596.20 si:ch1073-429i10.3, transcript variant X2
66. faua ENSDARG00000099022 207.55 1555.72 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
67. rps6 ENSDARG00000019778 205.36 1539.31 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
68. top1l ENSDARG00000070545 201.56 1510.82 DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
69. rpl18 ENSDARG00000029533 198.36 1486.84 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
70. mt-co1 ENSDARG00000063905 196.17 1470.42 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
71. rpsa ENSDARG00000019181 195.17 1462.92 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
72. rps15a ENSDARG00000010160 194.77 1459.93 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
73. rps5 ENSDARG00000043453 193.17 1447.93 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
74. RPL29 ENSDARG00000077717 192.37 1441.94 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
75. rps4x ENSDARG00000014690 191.57 1435.94 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
76. rps12 ENSDARG00000036875, ENSDARG00000115157 190.57 1428.44 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
77. rps27.1 ENSDARG00000023298 189.38 1419.52 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
78. rpl35 ENSDARG00000018334 188.78 1415.03 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
79. zgc:161979_1 zgc:161979_1 181.18 1358.06
80. marcksb ENSDARG00000008803 180.79 1355.14 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
81. rpl15 ENSDARG00000009285 179.99 1349.14 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
82. rplp0 ENSDARG00000051783 179.99 1349.14 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
83. rpl7 ENSDARG00000007320 178.99 1341.65 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
84. eif5a2 ENSDARG00000056186 178.79 1340.15 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
85. rps19 ENSDARG00000030602 177.39 1329.65 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
86. ppiab ENSDARG00000103994 176.79 1325.15 peptidylprolyl isomerase Ab (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-7459]
87. rps3 ENSDARG00000103007 175.99 1319.16 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
88. tuba8l ENSDARG00000042708 172.20 1290.75 tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
89. rplp2l ENSDARG00000011201 171.20 1283.25 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
90. apoc1l apoc1l 169.60 1271.26
91. rps9 ENSDARG00000011405, ENSDARG00000113248 169.00 1266.76 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
92. rpl5b ENSDARG00000015862, ENSDARG00000109661 168.80 1265.26 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
93. apobb apobb 168.20 1260.77
94. rpl24 ENSDARG00000099104 168.20 1260.77 ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
95. rpl39 ENSDARG00000036316, ENSDARG00000117167 163.01 1221.86 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
96. fkbp1aa ENSDARG00000022684 162.61 1218.87 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
97. pbx4 ENSDARG00000052150 161.81 1212.87 pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
98. si:dkey-150i13.2 ENSDARG00000071052 158.41 1187.38 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
99. marcksl1b ENSDARG00000035715 157.81 1182.89 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
100. ddx5 ENSDARG00000038068 157.41 1179.89 DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA