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Experiment Zebrafish_28hpf_trunk2, section s24.

Sample reads: 133,402. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 16350.45 122565.62
2. krt4 ENSDARG00000017624, ENSDARG00000115790 5522.34 41396.36 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoc1l apoc1l 2598.75 19480.65
4. apoa1b ENSDARG00000101324 2165.62 16233.84 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
5. mt-nd2 ENSDARG00000063899 1732.50 12987.10 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. apoa1a ENSDARG00000012076, ENSDARG00000110395 1515.94 11363.73 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
7. apoa2 ENSDARG00000015866 1407.66 10552.05 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
8. mt-atp6 ENSDARG00000063911 1299.37 9740.29 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
9. tmsb4x ENSDARG00000077777 1299.37 9740.29 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
10. mt-co2 ENSDARG00000063908 1191.09 8928.60 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
11. zgc:161979 zgc:161979 1191.09 8928.60
12. actb2 ENSDARG00000037870 1082.81 8116.92 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
13. zgc:161979_1 zgc:161979_1 1082.81 8116.92
14. eef1a1l1 ENSDARG00000020850 866.25 6493.55 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
15. mt-nd1 ENSDARG00000063895 866.25 6493.55 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
16. si:dkey-151g10.6 si:dkey-151g10.6 866.25 6493.55
17. actb1 ENSDARG00000037746, ENSDARG00000113649 757.97 5681.87 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
18. actc1b ENSDARG00000099197 757.97 5681.87 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
19. mt-nd4 ENSDARG00000063917 757.97 5681.87 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
20. rpl8 ENSDARG00000014867 757.97 5681.87 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
21. atp2a1 ENSDARG00000020574 649.69 4870.18 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
22. ckma ENSDARG00000035327, ENSDARG00000114671 649.69 4870.18 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
23. mt-co3 ENSDARG00000063912 649.69 4870.18 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
24. mt-cyb ENSDARG00000063924 649.69 4870.18 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
25. rpl39 ENSDARG00000036316, ENSDARG00000117167 649.69 4870.18 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
26. si:dkey-150i13.2 ENSDARG00000071052 649.69 4870.18 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
27. tpma ENSDARG00000033683 649.69 4870.18 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
28. apobb apobb 541.41 4058.50
29. bhmt ENSDARG00000013430 541.41 4058.50 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
30. ckmb ENSDARG00000040565 541.41 4058.50 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
31. myl10 ENSDARG00000062592 541.41 4058.50 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
32. ppiaa ENSDARG00000009212 541.41 4058.50 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
33. ptmab ENSDARG00000101766 541.41 4058.50 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
34. pvalb9 ENSDARG00000071601, ENSDARG00000113946 541.41 4058.50 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
35. rpl10a ENSDARG00000042905, ENSDARG00000115649 541.41 4058.50 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
36. rps26l ENSDARG00000030408 541.41 4058.50 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
37. zgc:112425 zgc:112425 541.41 4058.50
38. BX511252.1 BX511252.1 433.12 3246.74
39. RPL37A RPL37A 433.12 3246.74
40. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 433.12 3246.74 aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
41. aldoaa ENSDARG00000011665 433.12 3246.74 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
42. apoa4 apoa4 433.12 3246.74
43. atp5g1 433.12 3246.74 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
44. atp6v0ca ENSDARG00000057853 433.12 3246.74 ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
45. cox7a3 433.12 3246.74 cytochrome c oxidase subunit VIIa polypeptide 3
46. eef2b ENSDARG00000100371, ENSDARG00000109247 433.12 3246.74 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
47. fosl2 ENSDARG00000040623 433.12 3246.74 fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]
48. hmga1a ENSDARG00000028335 433.12 3246.74 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
49. mthfd1l ENSDARG00000042221, ENSDARG00000110473 433.12 3246.74 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
50. rpl22 ENSDARG00000070437 433.12 3246.74 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
51. rps17 ENSDARG00000104011 433.12 3246.74 ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
52. rps2 ENSDARG00000077291 433.12 3246.74 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
53. rps20 ENSDARG00000036044 433.12 3246.74 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
54. tpm3 ENSDARG00000005162 433.12 3246.74 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
55. APOA4_1 APOA4_1 324.84 2435.05
56. MKI67 ENSDARG00000091150 324.84 2435.05 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
57. acta1b ENSDARG00000055618 324.84 2435.05 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
58. anxa1a ENSDARG00000026726 324.84 2435.05 annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
59. apoeb ENSDARG00000040295 324.84 2435.05 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
60. btf3 ENSDARG00000035400, ENSDARG00000116462 324.84 2435.05 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
61. capn2b ENSDARG00000055592 324.84 2435.05 calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
62. cd9b ENSDARG00000016691 324.84 2435.05 CD9 molecule b [Source:ZFIN;Acc:ZDB-GENE-040426-2768]
63. ctsla ENSDARG00000007836 324.84 2435.05 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
64. faua ENSDARG00000099022 324.84 2435.05 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
65. gamt ENSDARG00000070844, ENSDARG00000109945 324.84 2435.05 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
66. gatm ENSDARG00000036239 324.84 2435.05 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
67. mtpn ENSDARG00000104018 324.84 2435.05 myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
68. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 324.84 2435.05 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
69. psap ENSDARG00000013968 324.84 2435.05 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
70. psmd14 ENSDARG00000063100 324.84 2435.05 proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
71. ptbp3 ENSDARG00000043757 324.84 2435.05 polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
72. rbp4 ENSDARG00000101199 324.84 2435.05 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
73. rpl11 ENSDARG00000043509 324.84 2435.05 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
74. rpl36a ENSDARG00000058105, ENSDARG00000112656 324.84 2435.05 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
75. rpl5b ENSDARG00000015862, ENSDARG00000109661 324.84 2435.05 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
76. rpl7 ENSDARG00000007320 324.84 2435.05 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
77. rplp0 ENSDARG00000051783 324.84 2435.05 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
78. rplp1 ENSDARG00000021864 324.84 2435.05 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
79. rps27.1 ENSDARG00000023298 324.84 2435.05 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
80. rps27a ENSDARG00000032725, ENSDARG00000114059 324.84 2435.05 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
81. rps3 ENSDARG00000103007 324.84 2435.05 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
82. rps3a ENSDARG00000035692, ENSDARG00000114628, ENSDARG00000115378 324.84 2435.05 ribosomal protein S3A [Source:ZFIN;Acc:ZDB-GENE-030131-9184]
83. rps6 ENSDARG00000019778 324.84 2435.05 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
84. sf3b2 ENSDARG00000018049 324.84 2435.05 splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
85. ube2e2 ENSDARG00000034670 324.84 2435.05 ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
86. APOB APOB 216.56 1623.37
87. RPS17L RPS17L 216.56 1623.37
88. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 216.56 1623.37 actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
89. ahcy ENSDARG00000005191 216.56 1623.37 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
90. aimp1 ENSDARG00000060036 216.56 1623.37 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
91. aldoab ENSDARG00000034470 216.56 1623.37 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
92. alyref ENSDARG00000077732 216.56 1623.37 Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
93. ap3d1 ENSDARG00000071424, ENSDARG00000114974 216.56 1623.37 adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
94. appl1 216.56 1623.37 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
95. atp6ap1b ENSDARG00000037153 216.56 1623.37 ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
96. cct6a ENSDARG00000021252 216.56 1623.37 chaperonin containing TCP1, subunit 6A (zeta 1) [Source:ZFIN;Acc:ZDB-GENE-011018-2]
97. cfl1l ENSDARG00000012972 216.56 1623.37 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
98. col1a1b ENSDARG00000035809 216.56 1623.37 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
99. col1a2 ENSDARG00000020007 216.56 1623.37 collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]
100. csrnp2 ENSDARG00000075972 216.56 1623.37 cysteine-serine-rich nuclear protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-137]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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