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Experiment Zebrafish_28hpf_trunk1, section s13.

Sample reads: 133,393. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 21557.12 161606.63
2. tpma ENSDARG00000033683 1895.77 14211.96 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
3. ckmb ENSDARG00000040565 1653.53 12395.97 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
4. mt-co2 ENSDARG00000063908 1604.54 12028.71 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. mt-nd2 ENSDARG00000063899 1294.24 9702.49 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. krt4 ENSDARG00000017624, ENSDARG00000115790 1083.30 8121.14 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
7. actc1b ENSDARG00000099197 1066.97 7998.72 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
8. si:dkey-151g10.6 si:dkey-151g10.6 1062.89 7968.14
9. ckma ENSDARG00000035327, ENSDARG00000114671 986.67 7396.74 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
10. eef1a1l1 ENSDARG00000020850 986.67 7396.74 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
11. AC024175.17 AC024175.17 917.27 6876.47
12. tmsb4x ENSDARG00000077777 892.77 6692.80 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
13. actb2 ENSDARG00000037870 764.84 5733.75 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
14. mt-co3 ENSDARG00000063912 760.76 5703.17 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
15. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 755.32 5662.39 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
16. mylz3 ENSDARG00000017441 719.93 5397.08 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
17. mt-nd4 ENSDARG00000063917 714.49 5356.30 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
18. myhz1.3 ENSDARG00000067997 666.86 4999.23 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
19. mt-atp6 ENSDARG00000063911 653.25 4897.20 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
20. rpl23 ENSDARG00000053457 596.09 4468.69 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
21. ppiaa ENSDARG00000009212 593.37 4448.30 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
22. rpl10a ENSDARG00000042905, ENSDARG00000115649 577.03 4325.80 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
23. tnnc2 ENSDARG00000070835, ENSDARG00000111155 555.26 4162.60 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
24. rpl18a ENSDARG00000025073 547.09 4101.35 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
25. mt-nd1 ENSDARG00000063895 528.04 3958.54 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
26. ttna ttna 526.68 3948.35
27. atp2a1 ENSDARG00000020574 525.32 3938.15 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
28. hspa8 ENSDARG00000068992, ENSDARG00000114726 515.79 3866.71 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
29. ttnb ttnb 502.18 3764.68
30. rpl21 ENSDARG00000010516, ENSDARG00000110263 489.93 3672.84 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
31. rpl36a ENSDARG00000058105, ENSDARG00000112656 488.57 3662.65 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
32. rpl8 ENSDARG00000014867 462.72 3468.86 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
33. rps14 ENSDARG00000036629 450.47 3377.03 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
34. myhz2 ENSDARG00000012944 449.11 3366.83 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
35. eef2b ENSDARG00000100371, ENSDARG00000109247 435.50 3264.80 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
36. rps23 ENSDARG00000021838 432.78 3244.41 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
37. zgc:112425 zgc:112425 431.41 3234.14
38. btf3 ENSDARG00000035400, ENSDARG00000116462 420.53 3152.57 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
39. rpl26 ENSDARG00000102317 419.17 3142.38 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
40. rplp1 ENSDARG00000021864 406.92 3050.55 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
41. rpl36 ENSDARG00000100588 401.47 3009.69 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
42. si:dkey-150i13.2 ENSDARG00000071052 398.75 2989.30 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
43. rps2 ENSDARG00000077291 389.23 2917.93 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
44. rpl19 ENSDARG00000013307 387.86 2907.66 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
45. pvalb2 ENSDARG00000002768, ENSDARG00000114085 382.42 2866.88 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
46. acta1a ENSDARG00000036371 375.62 2815.90 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
47. rps12 ENSDARG00000036875, ENSDARG00000115157 352.48 2642.43 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
48. rps27a ENSDARG00000032725, ENSDARG00000114059 352.48 2642.43 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
49. zgc:66286 zgc:66286 351.12 2632.23
50. actb1 ENSDARG00000037746, ENSDARG00000113649 347.04 2601.64 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
51. rpl27 ENSDARG00000015128 342.95 2570.98 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
52. myl1 ENSDARG00000014196 337.51 2530.20 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
53. tnni2b.1 ENSDARG00000035958 334.79 2509.81 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
54. rps26l ENSDARG00000030408 330.71 2479.22 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
55. rpsa ENSDARG00000019181 326.62 2448.56 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
56. rps9 ENSDARG00000011405, ENSDARG00000113248 323.90 2428.17 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
57. myl10 ENSDARG00000062592 319.82 2397.59 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
58. rpl9 ENSDARG00000037350, ENSDARG00000112384 315.74 2367.00 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
59. acta1b ENSDARG00000055618 313.01 2346.53 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
60. mt-cyb ENSDARG00000063924 310.29 2326.14 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
61. rpl11 ENSDARG00000043509 310.29 2326.14 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
62. rps15 ENSDARG00000070849, ENSDARG00000110979 307.57 2305.75 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
63. rpl18 ENSDARG00000029533 304.85 2285.36 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
64. tnni2a.4 ENSDARG00000029069 304.85 2285.36 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
65. rpl15 ENSDARG00000009285 303.49 2275.16 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
66. eif5a ENSDARG00000017235 298.04 2234.31 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
67. tnnt3a ENSDARG00000030270 288.52 2162.94 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
68. rps19 ENSDARG00000030602 283.07 2122.08 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
69. faua ENSDARG00000099022 281.71 2111.89 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
70. rps5 ENSDARG00000043453 277.63 2081.30 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
71. hmga1a ENSDARG00000028335 276.27 2071.11 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
72. rps20 ENSDARG00000036044 273.55 2050.71 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
73. rps3 ENSDARG00000103007 268.10 2009.86 ribosomal protein S3 [Source:ZFIN;Acc:ZDB-GENE-030131-8494]
74. rplp0 ENSDARG00000051783 261.30 1958.88 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
75. rpl6 ENSDARG00000058451 253.13 1897.63 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
76. hsp90aa1.1 ENSDARG00000010478 250.41 1877.24 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
77. rps29 ENSDARG00000041232 247.69 1856.85 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
78. aldoab ENSDARG00000034470 243.61 1826.26 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
79. RPL29 ENSDARG00000077717 239.52 1795.60 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
80. rpl14 ENSDARG00000103433 239.52 1795.60 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
81. rps27.1 ENSDARG00000023298 239.52 1795.60 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
82. gapdh ENSDARG00000043457 238.16 1785.41 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
83. rpl30 ENSDARG00000035871, ENSDARG00000109253 238.16 1785.41 ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
84. rps15a ENSDARG00000010160 230.00 1724.23 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
85. hbae3 ENSDARG00000079305 227.28 1703.84 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
86. hbbe3 ENSDARG00000038147, ENSDARG00000109344 227.28 1703.84 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
87. gnb2l1 217.75 1632.40 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
88. rplp2 ENSDARG00000101406 216.39 1622.20 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
89. apoc1l apoc1l 215.03 1612.01
90. rplp2l ENSDARG00000011201 215.03 1612.01 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
91. rps24 ENSDARG00000039347 215.03 1612.01 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
92. rps10 ENSDARG00000034897 212.30 1591.54 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
93. rps4x ENSDARG00000014690 209.58 1571.15 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
94. ATP5B 205.50 1540.57 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
95. fabp3 ENSDARG00000023290 201.42 1509.98 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
96. rpl31 ENSDARG00000053365 198.70 1489.59 ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
97. rps13 ENSDARG00000036298, ENSDARG00000112818 198.70 1489.59 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
98. rpl24 ENSDARG00000099104 197.33 1479.32 ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
99. rpl7 ENSDARG00000007320 197.33 1479.32 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
100. rpl35 ENSDARG00000018334 195.97 1469.12 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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