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Experiment Mouse_E11_5_slice_3, section s74.

Sample reads: 96,255. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 4642.21 48228.03 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Nd1 ENSMUSG00000064341 3046.83 31653.59 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
3. Ptma ENSMUSG00000026238 3030.83 31487.36 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
4. mt-Co2 ENSMUSG00000064354 2718.95 28247.23 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
5. mt-Nd4 ENSMUSG00000064363 2555.02 26544.16 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. mt-Atp6 ENSMUSG00000064357 2475.05 25713.35 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
7. Gm10800 ENSMUSG00000075014 2059.21 21393.18 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
8. mt-Co1 ENSMUSG00000064351 1367.47 14206.68 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. mt-Rnr2 ENSMUSG00000064339 1087.58 11298.89 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
10. mt-Nd3 ENSMUSG00000064360 1083.58 11257.34 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. Actb ENSMUSG00000029580 839.68 8723.46 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
12. H19 ENSMUSG00000000031 815.69 8474.22 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
13. mt-Co3 ENSMUSG00000064358 799.69 8308.00 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
14. mt-Nd2 ENSMUSG00000064345 767.70 7975.65 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
15. Mdk ENSMUSG00000027239 687.74 7144.95 midkine [Source:MGI Symbol;Acc:MGI:96949]
16. Eef1a1 ENSMUSG00000037742 559.78 5815.57 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
17. Igf2 ENSMUSG00000048583 487.81 5067.87 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
18. Gm17132 ENSMUSG00000061331 451.83 4694.07 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
19. Gm13340 ENSMUSG00000083563 407.84 4237.06 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
20. Hmga2 ENSMUSG00000056758 379.85 3946.27 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
21. Gm26870 ENSMUSG00000097312 351.86 3655.48 predicted gene, 26870 [Source:MGI Symbol;Acc:MGI:5477364]
22. mt-Nd5 ENSMUSG00000064367 351.86 3655.48 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
23. Hbb-y ENSMUSG00000052187 339.87 3530.92 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
24. Col3a1 ENSMUSG00000026043 271.90 2824.78 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
25. Npm1 ENSMUSG00000057113 267.90 2783.22 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
26. Cfl1 ENSMUSG00000056201 243.91 2533.99 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
27. Tubb5 ENSMUSG00000001525 231.91 2409.32 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
28. Rpsa ENSMUSG00000032518 223.91 2326.21 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
29. Hba-a1 ENSMUSG00000069919 203.92 2118.53 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
30. Rpl23 ENSMUSG00000071415 187.93 1952.41 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
31. Tuba1b ENSMUSG00000023004 187.93 1952.41 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
32. Eif4g2 ENSMUSG00000005610 183.93 1910.85 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
33. Myl6 ENSMUSG00000090841 183.93 1910.85 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
34. Nedd4 ENSMUSG00000032216 179.93 1869.30 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
35. Tpt1 ENSMUSG00000060126 179.93 1869.30 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
36. Grb10 ENSMUSG00000020176 175.93 1827.74 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
37. Pkm ENSMUSG00000032294 167.94 1744.73 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
38. Ubb ENSMUSG00000019505 167.94 1744.73 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
39. Rpl4 ENSMUSG00000032399 163.94 1703.18 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
40. Ran ENSMUSG00000029430 159.94 1661.62 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
41. Hsp90ab1 ENSMUSG00000023944 139.95 1453.94 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
42. Rps20 ENSMUSG00000028234 135.95 1412.39 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
43. Rps3a1 ENSMUSG00000028081 135.95 1412.39 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
44. Eif5a ENSMUSG00000078812 131.95 1370.83 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
45. Gm5805 ENSMUSG00000061848 123.95 1287.72 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
46. Hba-x ENSMUSG00000055609 123.95 1287.72 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
47. Ybx1 ENSMUSG00000028639 123.95 1287.72 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
48. mt-Rnr1 ENSMUSG00000064337 123.95 1287.72 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
49. Chchd2 ENSMUSG00000070493 119.95 1246.16 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
50. Eef1b2 ENSMUSG00000025967 119.95 1246.16 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
51. Pcbp1 ENSMUSG00000051695 119.95 1246.16 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
52. Rpl18a ENSMUSG00000045128 119.95 1246.16 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
53. Rps26 ENSMUSG00000025362 119.95 1246.16 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
54. Sfrp1 ENSMUSG00000031548 119.95 1246.16 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
55. Ywhab ENSMUSG00000018326 119.95 1246.16 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
56. Hnrnpa2b1 ENSMUSG00000004980 115.96 1204.71 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
57. Gm21897 ENSMUSG00000094472 111.96 1163.16 predicted gene, 21897 [Source:MGI Symbol;Acc:MGI:5434061]
58. Banf1 ENSMUSG00000024844 107.96 1121.60 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
59. Trim28 ENSMUSG00000005566 107.96 1121.60 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
60. Hnrnpc ENSMUSG00000060373 103.96 1080.04 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
61. Lamp1 ENSMUSG00000031447 103.96 1080.04 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
62. Mapre1 ENSMUSG00000027479 103.96 1080.04 microtubule-associated protein, RP/EB family, member 1 [Source:MGI Symbol;Acc:MGI:891995]
63. Ngfrap1 103.96 1080.04 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
64. Rrm2 ENSMUSG00000020649 103.96 1080.04 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
65. Tsc22d1 ENSMUSG00000022010 103.96 1080.04 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
66. Anp32b ENSMUSG00000028333 99.96 1038.49 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
67. Atp5g3 ENSMUSG00000018770 99.96 1038.49 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
68. Gm13936 ENSMUSG00000085444 99.96 1038.49 predicted gene 13936 [Source:MGI Symbol;Acc:MGI:3651878]
69. Hnrnph1 ENSMUSG00000007850 99.96 1038.49 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
70. Rplp1 ENSMUSG00000007892 99.96 1038.49 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
71. Rps5 ENSMUSG00000012848 99.96 1038.49 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
72. Sod1 ENSMUSG00000022982 99.96 1038.49 superoxide dismutase 1, soluble [Source:MGI Symbol;Acc:MGI:98351]
73. Paics ENSMUSG00000029247 95.96 996.93 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
74. Rps4x ENSMUSG00000031320 95.96 996.93 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
75. Tmsb4x ENSMUSG00000049775 95.96 996.93 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
76. U2af2 ENSMUSG00000030435 95.96 996.93 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
77. Rpl37 ENSMUSG00000041841 91.96 955.37 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
78. Set ENSMUSG00000054766 91.96 955.37 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
79. Sub1 ENSMUSG00000022205 91.96 955.37 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
80. Wbp5 91.96 955.37 WW domain binding protein 5
81. Aldh1a2 ENSMUSG00000013584 87.97 913.92 aldehyde dehydrogenase family 1, subfamily A2 [Source:MGI Symbol;Acc:MGI:107928]
82. Hmgn1 ENSMUSG00000040681 87.97 913.92 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
83. Peg3 ENSMUSG00000002265 87.97 913.92 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
84. Srsf3 ENSMUSG00000071172 87.97 913.92 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
85. Tpm1 ENSMUSG00000032366 87.97 913.92 tropomyosin 1, alpha [Source:MGI Symbol;Acc:MGI:98809]
86. Vim ENSMUSG00000026728 87.97 913.92 vimentin [Source:MGI Symbol;Acc:MGI:98932]
87. Ywhae ENSMUSG00000020849 87.97 913.92 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
88. H3f3b ENSMUSG00000016559 83.97 872.37 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
89. Hbb-bh1 ENSMUSG00000052217 83.97 872.37 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
90. Hsp90aa1 ENSMUSG00000021270 83.97 872.37 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
91. Mrfap1 ENSMUSG00000055302 83.97 872.37 Morf4 family associated protein 1 [Source:MGI Symbol;Acc:MGI:1914818]
92. Pbx1 ENSMUSG00000052534 83.97 872.37 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
93. Plagl1 ENSMUSG00000019817 83.97 872.37 pleiomorphic adenoma gene-like 1 [Source:MGI Symbol;Acc:MGI:1100874]
94. Tmsb10 ENSMUSG00000079523 83.97 872.37 thymosin, beta 10 [Source:MGI Symbol;Acc:MGI:109146]
95. Fkbp1a ENSMUSG00000032966 79.97 830.81 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
96. Rps9 ENSMUSG00000006333 79.97 830.81 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
97. Sfpq ENSMUSG00000028820 79.97 830.81 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:MGI Symbol;Acc:MGI:1918764]
98. Top2a ENSMUSG00000020914 79.97 830.81 topoisomerase (DNA) II alpha [Source:MGI Symbol;Acc:MGI:98790]
99. Tpm4 ENSMUSG00000031799 79.97 830.81 tropomyosin 4 [Source:MGI Symbol;Acc:MGI:2449202]
100. Acta2 ENSMUSG00000035783 75.97 789.25 actin, alpha 2, smooth muscle, aorta [Source:MGI Symbol;Acc:MGI:87909]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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