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Results for Vim

Gene Name Gene ID Reads Annotation
Vim ENSMUSG00000026728 27519 vimentin [Source:MGI Symbol;Acc:MGI:98932]







Genes with expression patterns similar to Vim

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Vim ENSMUSG00000026728 27519 6 1.000 1.000 1.000 1.000 1.000 1.000 vimentin [Source:MGI Symbol;Acc:MGI:98932]
2. Sox2 ENSMUSG00000074637 8409 3.852 - 0.718 0.758 0.814 0.830 0.732 SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
3. Pou3f2 ENSMUSG00000095139 2416 2.31 - - 0.746 0.804 0.760 - POU domain, class 3, transcription factor 2 [Source:MGI Symbol;Acc:MGI:101895]
4. Tuba1a ENSMUSG00000072235 51129 2.301 - - - 0.758 0.722 0.821 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
5. Nhlh2 ENSMUSG00000048540 1310 2.168 - - 0.701 0.754 0.713 - nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
6. Trp53i11 ENSMUSG00000068735 15944 1.672 - - - 0.839 - 0.833 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
7. C130071C03Rik ENSMUSG00000050334 1582 1.537 - - - 0.796 0.741 - RIKEN cDNA C130071C03 gene [Source:MGI Symbol;Acc:MGI:2443574]
8. Pou3f3 ENSMUSG00000045515 5137 1.52 - 0.734 - 0.786 - - POU domain, class 3, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102564]
9. 2610017I09Rik 2610017I09Rik 1595 1.516 - - - 0.750 0.766 -
10. Msi1 ENSMUSG00000054256 13785 1.515 0.704 - - 0.811 - - musashi RNA-binding protein 1 [Source:MGI Symbol;Acc:MGI:107376]
11. Zic4 ENSMUSG00000036972 1968 1.512 - - - 0.769 0.743 - zinc finger protein of the cerebellum 4 [Source:MGI Symbol;Acc:MGI:107201]
12. Rhbdl3 ENSMUSG00000017692 783 1.5 - - - 0.758 0.742 - rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
13. Tubb2b ENSMUSG00000045136 41060 1.48 - - 0.713 0.767 - - tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
14. Hes5 ENSMUSG00000048001 1640 1.467 - - 0.735 0.732 - - hes family bHLH transcription factor 5 [Source:MGI Symbol;Acc:MGI:104876]
15. Map1b ENSMUSG00000052727 28977 1.462 - - - 0.715 - 0.747 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
16. Soga3 ENSMUSG00000038916 3972 1.46 - - - 0.720 - 0.740 SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
17. AI854517 AI854517 539 1.447 - - - 0.742 0.705 -
18. Tubb3 ENSMUSG00000062380 9211 1.426 - - - 0.703 - 0.723 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
19. Rrm1 ENSMUSG00000030978 7077 0.835 0.835 - - - - - ribonucleotide reductase M1 [Source:MGI Symbol;Acc:MGI:98180]
20. Pea15a ENSMUSG00000013698 6011 0.826 - - - 0.826 - - phosphoprotein enriched in astrocytes 15A [Source:MGI Symbol;Acc:MGI:104799]
21. Enc1 ENSMUSG00000041773 2185 0.817 - - - 0.817 - - ectodermal-neural cortex 1 [Source:MGI Symbol;Acc:MGI:109610]
22. Hirip3 ENSMUSG00000042606 3990 0.81 0.810 - - - - - HIRA interacting protein 3 [Source:MGI Symbol;Acc:MGI:2142364]
23. Zic1 ENSMUSG00000032368 7734 0.797 - - - 0.797 - - zinc finger protein of the cerebellum 1 [Source:MGI Symbol;Acc:MGI:106683]
24. Pdpn ENSMUSG00000028583, ENSMUSG00000096951 1719 0.795 - - 0.795 - - - podoplanin [Source:MGI Symbol;Acc:MGI:103098]
25. Erdr1 17201 0.789 0.789 - - - - - erythroid differentiation regulator 1, transcript variant 1, non-coding
26. Ckb ENSMUSG00000001270 8443 0.785 - - - 0.785 - - creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
27. Nrep ENSMUSG00000042834 16031 0.78 - - - 0.780 - - neuronal regeneration related protein [Source:MGI Symbol;Acc:MGI:99444]
28. Rab35 ENSMUSG00000029518 2561 0.78 0.780 - - - - - RAB35, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1924657]
29. Dnajc9 ENSMUSG00000021811 4893 0.778 0.778 - - - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:MGI Symbol;Acc:MGI:1915326]
30. Taldo1 ENSMUSG00000025503 9391 0.777 0.777 - - - - - transaldolase 1 [Source:MGI Symbol;Acc:MGI:1274789]
31. Gm4707 ENSMUSG00000091831 10073 0.773 0.773 - - - - - predicted gene 4707 [Source:MGI Symbol;Acc:MGI:3782887]
32. Cyc1 ENSMUSG00000022551 4794 0.772 0.772 - - - - - cytochrome c-1 [Source:MGI Symbol;Acc:MGI:1913695]
33. Sugt1 ENSMUSG00000022024 5591 0.771 0.771 - - - - - SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1915205]
34. Sltm ENSMUSG00000032212 5014 0.769 0.769 - - - - - SAFB-like, transcription modulator [Source:MGI Symbol;Acc:MGI:1913910]
35. Med30 ENSMUSG00000038622 2325 0.766 0.766 - - - - - mediator complex subunit 30 [Source:MGI Symbol;Acc:MGI:1917040]
36. Dtx4 ENSMUSG00000039982 2901 0.765 - - - 0.765 - - deltex 4, E3 ubiquitin ligase [Source:MGI Symbol;Acc:MGI:2672905]
37. Jam2 ENSMUSG00000053062 1020 0.764 - - - 0.764 - - junction adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:1933820]
38. Atp5j ENSMUSG00000022890 11717 0.76 0.760 - - - - - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F [Source:MGI Symbol;Acc:MGI:107777]
39. Sall1 ENSMUSG00000031665 769 0.759 0.759 - - - - - spalt like transcription factor 1 [Source:MGI Symbol;Acc:MGI:1889585]
40. Phf21b ENSMUSG00000016624 849 0.758 - - - 0.758 - - PHD finger protein 21B [Source:MGI Symbol;Acc:MGI:2443812]
41. Psmc2 ENSMUSG00000028932 6789 0.758 0.758 - - - - - proteasome (prosome, macropain) 26S subunit, ATPase 2 [Source:MGI Symbol;Acc:MGI:109555]
42. Nrarp ENSMUSG00000078202 1708 0.758 - - - 0.758 - - Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
43. Xaf1 ENSMUSG00000040483 1172 0.757 0.757 - - - - - XIAP associated factor 1 [Source:MGI Symbol;Acc:MGI:3772572]
44. Zic3 ENSMUSG00000067860 549 0.757 - - - 0.757 - - zinc finger protein of the cerebellum 3 [Source:MGI Symbol;Acc:MGI:106676]
45. Slc38a1 ENSMUSG00000023169 5594 0.757 0.757 - - - - - solute carrier family 38, member 1 [Source:MGI Symbol;Acc:MGI:2145895]
46. Pias2 ENSMUSG00000025423 2581 0.755 0.755 - - - - - protein inhibitor of activated STAT 2 [Source:MGI Symbol;Acc:MGI:1096566]
47. Etf1 ENSMUSG00000024360 5755 0.754 0.754 - - - - - eukaryotic translation termination factor 1 [Source:MGI Symbol;Acc:MGI:2385071]
48. Tra2a ENSMUSG00000029817 4260 0.754 0.754 - - - - - transformer 2 alpha [Source:MGI Symbol;Acc:MGI:1933972]
49. Sox3 ENSMUSG00000045179 1137 0.753 - - - 0.753 - - SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
50. Ndufaf2 ENSMUSG00000068184 1600 0.753 0.753 - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:MGI Symbol;Acc:MGI:1922847]
51. Cdc25b ENSMUSG00000027330 1004 0.752 0.752 - - - - - cell division cycle 25B [Source:MGI Symbol;Acc:MGI:99701]
52. Sarnp ENSMUSG00000078427 4371 0.751 0.751 - - - - - SAP domain containing ribonucleoprotein [Source:MGI Symbol;Acc:MGI:1913368]
53. Phyhipl ENSMUSG00000037747 636 0.749 - - - 0.749 - - phytanoyl-CoA hydroxylase interacting protein-like [Source:MGI Symbol;Acc:MGI:1918161]
54. Plxna1 ENSMUSG00000030084 4895 0.748 0.748 - - - - - plexin A1 [Source:MGI Symbol;Acc:MGI:107685]
55. Sema5b ENSMUSG00000052133 891 0.747 - - - 0.747 - - sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B [Source:MGI Symbol;Acc:MGI:107555]
56. Nt5c3 ENSMUSG00000029780 2379 0.747 0.747 - - - - - 5'-nucleotidase, cytosolic III [Source:MGI Symbol;Acc:MGI:1927186]
57. Zfp334 ENSMUSG00000017667 3163 0.747 0.747 - - - - - zinc finger protein 334 [Source:MGI Symbol;Acc:MGI:2388656]
58. Wdr75 ENSMUSG00000025995 1792 0.747 0.747 - - - - - WD repeat domain 75 [Source:MGI Symbol;Acc:MGI:1920924]
59. Pafah1b1 ENSMUSG00000020745 6863 0.745 0.745 - - - - - platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 [Source:MGI Symbol;Acc:MGI:109520]
60. Fam20b ENSMUSG00000033557 1380 0.745 0.745 - - - - - family with sequence similarity 20, member B [Source:MGI Symbol;Acc:MGI:2443990]
61. Ebf1 ENSMUSG00000057098 3112 0.744 - - - 0.744 - - early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]
62. Ss18 ENSMUSG00000037013 2742 0.744 0.744 - - - - - SS18, nBAF chromatin remodeling complex subunit [Source:MGI Symbol;Acc:MGI:107708]
63. Bnip3l ENSMUSG00000022051 3416 0.743 0.743 - - - - - BCL2/adenovirus E1B interacting protein 3-like [Source:MGI Symbol;Acc:MGI:1332659]
64. Glrx3 ENSMUSG00000031068 3221 0.743 0.743 - - - - - glutaredoxin 3 [Source:MGI Symbol;Acc:MGI:1353653]
65. Med11 ENSMUSG00000018923 1869 0.742 0.742 - - - - - mediator complex subunit 11 [Source:MGI Symbol;Acc:MGI:1913422]
66. Cntn2 ENSMUSG00000053024 1798 0.742 - - - 0.742 - - contactin 2 [Source:MGI Symbol;Acc:MGI:104518]
67. Timm13 ENSMUSG00000020219 4527 0.742 0.742 - - - - - translocase of inner mitochondrial membrane 13 [Source:MGI Symbol;Acc:MGI:1353432]
68. Gm15776 7198 0.742 0.742 - - - - - predicted gene 15776
69. Dmtf1 ENSMUSG00000042508 914 0.742 0.742 - - - - - cyclin D binding myb-like transcription factor 1 [Source:MGI Symbol;Acc:MGI:1344415]
70. Mkrn1 ENSMUSG00000029922 1839 0.741 - - - 0.741 - - makorin, ring finger protein, 1 [Source:MGI Symbol;Acc:MGI:1859353]
71. Slc4a7 ENSMUSG00000021733 3154 0.741 0.741 - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 7 [Source:MGI Symbol;Acc:MGI:2443878]
72. Trim2 ENSMUSG00000027993 3587 0.741 - - - 0.741 - - tripartite motif-containing 2 [Source:MGI Symbol;Acc:MGI:1933163]
73. Fam220a ENSMUSG00000083012 1193 0.741 0.741 - - - - - family with sequence similarity 220, member A [Source:MGI Symbol;Acc:MGI:1914488]
74. Cox7a2 ENSMUSG00000032330 8581 0.741 0.741 - - - - - cytochrome c oxidase subunit 7A2 [Source:MGI Symbol;Acc:MGI:1316715]
75. Golph3 ENSMUSG00000022200 1780 0.74 0.740 - - - - - golgi phosphoprotein 3 [Source:MGI Symbol;Acc:MGI:1913879]
76. Heatr3 ENSMUSG00000031657 1306 0.74 0.740 - - - - - HEAT repeat containing 3 [Source:MGI Symbol;Acc:MGI:2444491]
77. Stard7 ENSMUSG00000027367 6536 0.74 0.740 - - - - - START domain containing 7 [Source:MGI Symbol;Acc:MGI:2139090]
78. Reep4 ENSMUSG00000033589 2187 0.739 0.739 - - - - - receptor accessory protein 4 [Source:MGI Symbol;Acc:MGI:1919799]
79. Erp29 ENSMUSG00000029616 2933 0.738 0.738 - - - - - endoplasmic reticulum protein 29 [Source:MGI Symbol;Acc:MGI:1914647]
80. Smu1 ENSMUSG00000028409 4193 0.738 0.738 - - - - - smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) [Source:MGI Symbol;Acc:MGI:1915546]
81. Dbnl ENSMUSG00000020476 1845 0.737 0.737 - - - - - drebrin-like [Source:MGI Symbol;Acc:MGI:700006]
82. Miat ENSMUSG00000097767 4258 0.737 - - - 0.737 - - myocardial infarction associated transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444886]
83. Fxr2 ENSMUSG00000018765 1650 0.737 0.737 - - - - - fragile X mental retardation, autosomal homolog 2 [Source:MGI Symbol;Acc:MGI:1346074]
84. Cops8 ENSMUSG00000034432 3968 0.737 0.737 - - - - - COP9 signalosome subunit 8 [Source:MGI Symbol;Acc:MGI:1915363]
85. Atf6 ENSMUSG00000026663 934 0.737 0.737 - - - - - activating transcription factor 6 [Source:MGI Symbol;Acc:MGI:1926157]
86. Cul5 ENSMUSG00000032030 1885 0.736 0.736 - - - - - cullin 5 [Source:MGI Symbol;Acc:MGI:1922967]
87. Thoc6 ENSMUSG00000041319 1276 0.735 0.735 - - - - - THO complex 6 [Source:MGI Symbol;Acc:MGI:2677480]
88. Slc1a2 ENSMUSG00000005089 830 0.735 - - - 0.735 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2 [Source:MGI Symbol;Acc:MGI:101931]
89. Wbp11 ENSMUSG00000030216 4813 0.735 0.735 - - - - - WW domain binding protein 11 [Source:MGI Symbol;Acc:MGI:1891823]
90. Kif3a ENSMUSG00000018395 1688 0.735 0.735 - - - - - kinesin family member 3A [Source:MGI Symbol;Acc:MGI:107689]
91. Chrna4 ENSMUSG00000027577 941 0.734 0.734 - - - - - cholinergic receptor, nicotinic, alpha polypeptide 4 [Source:MGI Symbol;Acc:MGI:87888]
92. Wwtr1 ENSMUSG00000027803 3120 0.734 0.734 - - - - - WW domain containing transcription regulator 1 [Source:MGI Symbol;Acc:MGI:1917649]
93. Cetn2 ENSMUSG00000031347 1649 0.734 0.734 - - - - - centrin 2 [Source:MGI Symbol;Acc:MGI:1347085]
94. Jakmip2 ENSMUSG00000024502 742 0.733 0.733 - - - - - janus kinase and microtubule interacting protein 2 [Source:MGI Symbol;Acc:MGI:1923467]
95. Impdh1 ENSMUSG00000003500 1615 0.732 0.732 - - - - - inosine monophosphate dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:96567]
96. Ap2s1 ENSMUSG00000008036 3268 0.732 0.732 - - - - - adaptor-related protein complex 2, sigma 1 subunit [Source:MGI Symbol;Acc:MGI:2141861]
97. Nudcd1 ENSMUSG00000038736 2406 0.732 0.732 - - - - - NudC domain containing 1 [Source:MGI Symbol;Acc:MGI:1914679]
98. Ndufaf4 ENSMUSG00000028261 2535 0.731 0.731 - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 4 [Source:MGI Symbol;Acc:MGI:1915743]
99. Pkp4 ENSMUSG00000026991 2294 0.731 0.731 - - - - - plakophilin 4 [Source:MGI Symbol;Acc:MGI:109281]
100. Trim71 ENSMUSG00000079259 1323 0.731 0.731 - - - - - tripartite motif-containing 71 [Source:MGI Symbol;Acc:MGI:2685973]

There are 104 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA