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Experiment Mouse_E11_5_slice_3, section s5.

Sample reads: 96,238. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 3338.80 34693.25 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 3206.20 33315.41 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Atp6 ENSMUSG00000064357 2054.14 21344.43 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Co2 ENSMUSG00000064354 2038.93 21186.38 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
5. mt-Nd1 ENSMUSG00000064341 1934.59 20102.19 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Nd4 ENSMUSG00000064363 1925.90 20011.90 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Co1 ENSMUSG00000064351 1371.60 14252.20 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Rnr2 ENSMUSG00000064339 1097.72 11406.33 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
9. mt-Co3 ENSMUSG00000064358 817.31 8492.61 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
10. Eef1a1 ENSMUSG00000037742 767.31 7973.07 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
11. Hbb-y ENSMUSG00000052187 647.76 6730.83 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
12. Actb ENSMUSG00000029580 636.89 6617.88 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
13. mt-Nd3 ENSMUSG00000064360 636.89 6617.88 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
14. mt-Nd2 ENSMUSG00000064345 515.17 5353.10 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
15. Mdk ENSMUSG00000027239 456.48 4743.25 midkine [Source:MGI Symbol;Acc:MGI:96949]
16. Rpsa ENSMUSG00000032518 434.74 4517.35 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
17. Gm13340 ENSMUSG00000083563 367.35 3817.11 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
18. Gm10800 ENSMUSG00000075014 363.01 3772.01 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
19. Hba-a1 ENSMUSG00000069919 356.49 3704.26 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
20. Tuba1b ENSMUSG00000023004 332.58 3455.82 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
21. Hba-x ENSMUSG00000055609 306.49 3184.72 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
22. Tuba1a ENSMUSG00000072235 286.93 2981.47 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
23. Cfl1 ENSMUSG00000056201 282.58 2936.27 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
24. Tubb5 ENSMUSG00000001525 280.41 2913.72 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
25. Nedd4 ENSMUSG00000032216 278.23 2891.07 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
26. Tmsb4x ENSMUSG00000049775 278.23 2891.07 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
27. Npm1 ENSMUSG00000057113 256.50 2665.27 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
28. Eif4g2 ENSMUSG00000005610 243.45 2529.67 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
29. Pkm ENSMUSG00000032294 241.28 2507.12 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
30. Tubb2b ENSMUSG00000045136 241.28 2507.12 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
31. mt-Nd5 ENSMUSG00000064367 226.06 2348.97 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
32. Tpt1 ENSMUSG00000060126 219.54 2281.23 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
33. H19 ENSMUSG00000000031 213.02 2213.48 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
34. mt-Rnr1 ENSMUSG00000064337 204.33 2123.18 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
35. Ubb ENSMUSG00000019505 199.98 2077.98 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
36. Rpl4 ENSMUSG00000032399 189.11 1965.03 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
37. Chchd2 ENSMUSG00000070493 186.94 1942.48 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
38. Rrm2 ENSMUSG00000020649 186.94 1942.48 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
39. Hbb-bh1 ENSMUSG00000052217 184.76 1919.83 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
40. Rps26 ENSMUSG00000025362 182.59 1897.28 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
41. Rps20 ENSMUSG00000028234 173.90 1806.98 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
42. Banf1 ENSMUSG00000024844 167.37 1739.13 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
43. Ran ENSMUSG00000029430 165.20 1716.58 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
44. Eif5a ENSMUSG00000078812 156.51 1626.28 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
45. Hsp90aa1 ENSMUSG00000021270 154.33 1603.63 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
46. Rplp1 ENSMUSG00000007892 154.33 1603.63 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
47. Hsp90ab1 ENSMUSG00000023944 149.99 1558.54 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
48. Hnrnpc ENSMUSG00000060373 145.64 1513.34 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
49. Ybx1 ENSMUSG00000028639 145.64 1513.34 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
50. Hnrnpa2b1 ENSMUSG00000004980 143.46 1490.68 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
51. Rpl23 ENSMUSG00000071415 143.46 1490.68 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
52. Atp5g3 ENSMUSG00000018770 141.29 1468.13 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
53. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 141.29 1468.13 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
54. Hba-a2 ENSMUSG00000069917 139.12 1445.59 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
55. Map1b ENSMUSG00000052727 136.94 1422.93 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
56. Vim ENSMUSG00000026728 136.94 1422.93 vimentin [Source:MGI Symbol;Acc:MGI:98932]
57. Eef1b2 ENSMUSG00000025967 132.60 1377.84 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
58. Rpl18a ENSMUSG00000045128 132.60 1377.84 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
59. Hnrnph1 ENSMUSG00000007850 130.42 1355.19 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
60. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 130.42 1355.19 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
61. Cdk4 ENSMUSG00000006728 126.07 1309.98 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
62. Rps4x ENSMUSG00000031320 126.07 1309.98 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
63. Pabpc1 ENSMUSG00000022283 121.73 1264.89 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
64. Pcbp1 ENSMUSG00000051695 121.73 1264.89 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
65. Rnd2 ENSMUSG00000001313 121.73 1264.89 Rho family GTPase 2 [Source:MGI Symbol;Acc:MGI:1338755]
66. Msi1 ENSMUSG00000054256 119.55 1242.24 musashi RNA-binding protein 1 [Source:MGI Symbol;Acc:MGI:107376]
67. Set ENSMUSG00000054766 119.55 1242.24 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
68. Ywhaz ENSMUSG00000022285 119.55 1242.24 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:MGI Symbol;Acc:MGI:109484]
69. Marcks ENSMUSG00000069662 115.21 1197.14 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
70. Lamp1 ENSMUSG00000031447 113.03 1174.49 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
71. Grb10 ENSMUSG00000020176 110.86 1151.94 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
72. Gm14303 ENSMUSG00000081344 108.68 1129.29 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
73. Paics ENSMUSG00000029247 108.68 1129.29 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
74. Rpl41 ENSMUSG00000093674 108.68 1129.29 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
75. Gm5805 ENSMUSG00000061848 106.51 1106.74 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
76. Rps5 ENSMUSG00000012848 106.51 1106.74 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
77. Cd24a ENSMUSG00000047139 104.34 1084.19 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
78. Cdkn1c ENSMUSG00000037664 104.34 1084.19 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
79. Hmgn1 ENSMUSG00000040681 102.16 1061.54 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
80. Id1 ENSMUSG00000042745 102.16 1061.54 inhibitor of DNA binding 1 [Source:MGI Symbol;Acc:MGI:96396]
81. Rpl32 ENSMUSG00000057841 102.16 1061.54 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
82. Rps3a1 ENSMUSG00000028081 102.16 1061.54 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
83. Sox2 ENSMUSG00000074637 102.16 1061.54 SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
84. Ssbp3 ENSMUSG00000061887 102.16 1061.54 single-stranded DNA binding protein 3 [Source:MGI Symbol;Acc:MGI:1919725]
85. Ddx5 ENSMUSG00000020719 99.99 1038.99 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
86. Ndufa12 ENSMUSG00000020022 99.99 1038.99 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
87. Stmn1 ENSMUSG00000028832 99.99 1038.99 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
88. Cox8a ENSMUSG00000035885 97.82 1016.44 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
89. Myl6 ENSMUSG00000090841 97.82 1016.44 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
90. Rpl37 ENSMUSG00000041841 97.82 1016.44 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
91. Srsf3 ENSMUSG00000071172 97.82 1016.44 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
92. Hnrnpa0 ENSMUSG00000007836 95.64 993.79 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
93. Hnrnpk ENSMUSG00000021546 95.64 993.79 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
94. Rpl39-ps ENSMUSG00000036305 95.64 993.79 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
95. Son ENSMUSG00000022961 95.64 993.79 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
96. Trim28 ENSMUSG00000005566 95.64 993.79 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
97. Fscn1 ENSMUSG00000029581 93.47 971.24 fascin actin-bundling protein 1 [Source:MGI Symbol;Acc:MGI:1352745]
98. H3f3b ENSMUSG00000016559 91.30 948.69 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
99. Ywhaq ENSMUSG00000076432 91.30 948.69 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:MGI Symbol;Acc:MGI:891963]
100. Crabp1 ENSMUSG00000032291 89.12 926.04 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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