Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E11_5_slice_3, section s20.

Sample reads: 96,248. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 3454.04 35887.07 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 2636.48 27392.71 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Atp6 ENSMUSG00000064357 2323.99 24145.98 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Co2 ENSMUSG00000064354 1676.45 17418.12 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
5. mt-Nd4 ENSMUSG00000064363 1654.76 17192.76 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. mt-Nd1 ENSMUSG00000064341 1649.78 17141.02 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
7. mt-Co1 ENSMUSG00000064351 1141.48 11859.84 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. Actb ENSMUSG00000029580 849.22 8823.30 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
9. H19 ENSMUSG00000000031 775.64 8058.81 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
10. mt-Nd3 ENSMUSG00000064360 741.93 7708.56 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. Eef1a1 ENSMUSG00000037742 685.65 7123.82 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
12. mt-Co3 ENSMUSG00000064358 627.31 6517.68 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
13. mt-Nd2 ENSMUSG00000064345 510.65 5305.59 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
14. Hbb-y ENSMUSG00000052187 499.80 5192.86 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
15. mt-Rnr2 ENSMUSG00000064339 431.50 4483.23 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
16. Tubb2b ENSMUSG00000045136 421.53 4379.65 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
17. Cfl1 ENSMUSG00000056201 419.19 4355.33 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
18. Mdk ENSMUSG00000027239 361.73 3758.33 midkine [Source:MGI Symbol;Acc:MGI:96949]
19. Tubb5 ENSMUSG00000001525 346.20 3596.98 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
20. Igf2 ENSMUSG00000048583 302.81 3146.16 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
21. Gm13340 ENSMUSG00000083563 301.05 3127.87 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
22. Pkm ENSMUSG00000032294 294.31 3057.85 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
23. Rpsa ENSMUSG00000032518 290.50 3018.26 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
24. Hba-a1 ENSMUSG00000069919 281.41 2923.82 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
25. Hba-x ENSMUSG00000055609 275.84 2865.94 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
26. Map1b ENSMUSG00000052727 275.55 2862.93 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
27. Tuba1a ENSMUSG00000072235 269.10 2795.92 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
28. Ubb ENSMUSG00000019505 238.91 2482.25 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
29. Eif4g2 ENSMUSG00000005610 235.98 2451.80 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
30. mt-Nd5 ENSMUSG00000064367 231.58 2406.09 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
31. Tuba1b ENSMUSG00000023004 230.70 2396.95 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
32. Nedd4 ENSMUSG00000032216 229.82 2387.80 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
33. Tpt1 ENSMUSG00000060126 226.89 2357.36 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
34. Tmsb4x ENSMUSG00000049775 219.27 2278.19 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
35. Rpl4 ENSMUSG00000032399 190.54 1979.69 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
36. Npm1 ENSMUSG00000057113 189.95 1973.56 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
37. Chchd2 ENSMUSG00000070493 164.74 1711.63 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
38. Hsp90aa1 ENSMUSG00000021270 164.45 1708.62 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
39. Rpl18a ENSMUSG00000045128 163.57 1699.47 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
40. Rpl23 ENSMUSG00000071415 162.10 1684.20 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
41. Eif5a ENSMUSG00000078812 156.54 1626.43 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
42. Tmsb10 ENSMUSG00000079523 156.54 1626.43 thymosin, beta 10 [Source:MGI Symbol;Acc:MGI:109146]
43. Hsp90ab1 ENSMUSG00000023944 150.97 1568.56 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
44. Cdkn1c ENSMUSG00000037664 150.67 1565.44 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
45. Atp5g3 ENSMUSG00000018770 142.46 1480.14 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
46. Pcbp1 ENSMUSG00000051695 134.84 1400.97 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
47. Fkbp1a ENSMUSG00000032966 134.55 1397.96 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
48. Rps20 ENSMUSG00000028234 134.26 1394.95 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
49. Nnat ENSMUSG00000067786 133.67 1388.82 neuronatin [Source:MGI Symbol;Acc:MGI:104716]
50. Stmn1 ENSMUSG00000028832 133.08 1382.69 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
51. Hba-a2 ENSMUSG00000069917 130.45 1355.36 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
52. Myl6 ENSMUSG00000090841 130.45 1355.36 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
53. Rps4x ENSMUSG00000031320 128.98 1340.09 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
54. Trim28 ENSMUSG00000005566 125.76 1306.63 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
55. Ywhaz ENSMUSG00000022285 125.76 1306.63 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:MGI Symbol;Acc:MGI:109484]
56. Eef1b2 ENSMUSG00000025967 124.58 1294.37 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
57. Gm9844 ENSMUSG00000091955 121.95 1267.05 predicted pseudogene 9844 [Source:MGI Symbol;Acc:MGI:3704288]
58. Cd24a ENSMUSG00000047139 121.65 1263.93 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
59. Ywhab ENSMUSG00000018326 120.48 1251.77 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
60. Marcks ENSMUSG00000069662 118.13 1227.36 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
61. Tubb3 ENSMUSG00000062380 118.13 1227.36 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
62. Hnrnpa2b1 ENSMUSG00000004980 117.84 1224.34 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
63. Hnrnpc ENSMUSG00000060373 117.55 1221.33 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
64. Grb10 ENSMUSG00000020176 116.96 1215.20 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
65. Ran ENSMUSG00000029430 116.67 1212.19 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
66. Tecr ENSMUSG00000031708 116.38 1209.17 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
67. Trp53i11 ENSMUSG00000068735 116.38 1209.17 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
68. Ywhae ENSMUSG00000020849 115.79 1203.04 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
69. Ywhag ENSMUSG00000051391 115.50 1200.03 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide [Source:MGI Symbol;Acc:MGI:108109]
70. Jund ENSMUSG00000071076, ENSMUSG00000110974 112.56 1169.49 jun D proto-oncogene [Source:MGI Symbol;Acc:MGI:96648]
71. Nefl ENSMUSG00000022055 111.98 1163.46 neurofilament, light polypeptide [Source:MGI Symbol;Acc:MGI:97313]
72. Rps26 ENSMUSG00000025362 110.81 1151.30 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
73. Rplp1 ENSMUSG00000007892 109.93 1142.16 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
74. Fscn1 ENSMUSG00000029581 109.63 1139.04 fascin actin-bundling protein 1 [Source:MGI Symbol;Acc:MGI:1352745]
75. Ndufa12 ENSMUSG00000020022 109.05 1133.02 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
76. Ybx1 ENSMUSG00000028639 107.58 1117.74 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
77. Hbb-bh1 ENSMUSG00000052217 104.94 1090.31 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
78. U2af2 ENSMUSG00000030435 102.01 1059.87 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
79. Stmn2 ENSMUSG00000027500 101.13 1050.73 stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
80. Ngfrap1 99.67 1035.56 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
81. Ddx5 ENSMUSG00000020719 97.61 1014.16 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
82. Paics ENSMUSG00000029247 96.44 1002.00 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
83. Rpl37 ENSMUSG00000041841 96.44 1002.00 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
84. Rrm2 ENSMUSG00000020649 96.44 1002.00 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
85. Dpysl2 ENSMUSG00000022048 96.15 998.99 dihydropyrimidinase-like 2 [Source:MGI Symbol;Acc:MGI:1349763]
86. Marcksl1 ENSMUSG00000047945 93.51 971.56 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
87. Hmga2 ENSMUSG00000056758 92.34 959.40 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
88. Gap43 ENSMUSG00000047261 92.05 956.39 growth associated protein 43 [Source:MGI Symbol;Acc:MGI:95639]
89. Scd2 ENSMUSG00000025203 91.75 953.27 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
90. Rpl32 ENSMUSG00000057841 91.17 947.25 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
91. Hmgn1 ENSMUSG00000040681 90.87 944.13 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
92. Pbx1 ENSMUSG00000052534 90.87 944.13 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
93. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 90.29 938.10 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
94. Uba1 ENSMUSG00000001924 89.99 934.99 ubiquitin-like modifier activating enzyme 1 [Source:MGI Symbol;Acc:MGI:98890]
95. Hnrnpa0 ENSMUSG00000007836 89.11 925.84 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
96. Vim ENSMUSG00000026728 88.82 922.83 vimentin [Source:MGI Symbol;Acc:MGI:98932]
97. Rps5 ENSMUSG00000012848 87.94 913.69 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
98. Eef2 ENSMUSG00000034994 87.35 907.56 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
99. Banf1 ENSMUSG00000024844 87.06 904.54 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
100. Hnrnph1 ENSMUSG00000007850 87.06 904.54 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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