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Experiment Mouse_E11_5_slice_3, section s11.

Sample reads: 96,261. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 4191.26 43540.61 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 3517.52 36541.51 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Atp6 ENSMUSG00000064357 2186.34 22712.64 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Nd4 ENSMUSG00000064363 1787.06 18564.75 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Co2 ENSMUSG00000064354 1779.31 18484.24 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Nd1 ENSMUSG00000064341 1773.88 18427.83 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
7. mt-Co1 ENSMUSG00000064351 1302.50 13530.93 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. Eef1a1 ENSMUSG00000037742 852.83 8859.56 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
9. Gm10800 ENSMUSG00000075014 811.74 8432.70 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
10. mt-Nd3 ENSMUSG00000064360 682.26 7087.61 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. mt-Co3 ENSMUSG00000064358 652.80 6781.57 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
12. Hbb-y ENSMUSG00000052187 581.47 6040.56 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
13. mt-Nd2 ENSMUSG00000064345 530.30 5508.98 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
14. Actb ENSMUSG00000029580 503.17 5227.15 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
15. Rpsa ENSMUSG00000032518 398.50 4139.79 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
16. Mdk ENSMUSG00000027239 372.92 3874.05 midkine [Source:MGI Symbol;Acc:MGI:96949]
17. mt-Rnr2 ENSMUSG00000064339 369.04 3833.75 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
18. Tuba1b ENSMUSG00000023004 355.86 3696.83 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
19. Hba-a1 ENSMUSG00000069919 346.56 3600.21 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
20. Npm1 ENSMUSG00000057113 332.60 3455.19 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
21. Gm13340 ENSMUSG00000083563 331.05 3439.09 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
22. Hba-x ENSMUSG00000055609 324.07 3366.58 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
23. Rpl18a ENSMUSG00000045128 314.77 3269.97 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
24. Cfl1 ENSMUSG00000056201 281.43 2923.62 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
25. Tubb5 ENSMUSG00000001525 279.88 2907.51 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
26. Crabp1 ENSMUSG00000032291 269.03 2794.80 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
27. Pkm ENSMUSG00000032294 267.48 2778.70 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
28. Rrm2 ENSMUSG00000020649 262.05 2722.29 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
29. Eif4g2 ENSMUSG00000005610 258.17 2681.98 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
30. Tubb2b ENSMUSG00000045136 258.17 2681.98 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
31. Nedd4 ENSMUSG00000032216 243.44 2528.96 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
32. Rpl4 ENSMUSG00000032399 243.44 2528.96 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
33. H19 ENSMUSG00000000031 238.79 2480.65 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
34. Tpt1 ENSMUSG00000060126 228.71 2375.94 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
35. Ubb ENSMUSG00000019505 228.71 2375.94 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
36. Tuba1a ENSMUSG00000072235 225.61 2343.73 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
37. Tmsb4x ENSMUSG00000049775 221.73 2303.43 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
38. mt-Nd5 ENSMUSG00000064367 215.53 2239.02 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
39. Hsp90aa1 ENSMUSG00000021270 206.23 2142.41 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
40. Hnrnpc ENSMUSG00000060373 197.70 2053.79 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
41. Rpl23 ENSMUSG00000071415 180.64 1876.57 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
42. Eif5a ENSMUSG00000078812 178.32 1852.46 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
43. Banf1 ENSMUSG00000024844 167.46 1739.65 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
44. Hsp90ab1 ENSMUSG00000023944 163.59 1699.44 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
45. Hnrnpa2b1 ENSMUSG00000004980 162.81 1691.34 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
46. Rplp1 ENSMUSG00000007892 160.49 1667.24 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
47. Rps20 ENSMUSG00000028234 158.16 1643.03 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
48. Rps26 ENSMUSG00000025362 157.39 1635.03 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
49. Ybx1 ENSMUSG00000028639 157.39 1635.03 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
50. Map1b ENSMUSG00000052727 155.06 1610.83 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
51. Hba-a2 ENSMUSG00000069917 152.73 1586.62 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
52. Chchd2 ENSMUSG00000070493 151.96 1578.63 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
53. Paics ENSMUSG00000029247 151.18 1570.52 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
54. Atp5g3 ENSMUSG00000018770 148.08 1538.32 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
55. Eef1b2 ENSMUSG00000025967 147.31 1530.32 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
56. Fkbp1a ENSMUSG00000032966 147.31 1530.32 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
57. Ran ENSMUSG00000029430 144.98 1506.11 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
58. Set ENSMUSG00000054766 143.43 1490.01 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
59. Msi1 ENSMUSG00000054256 129.47 1344.99 musashi RNA-binding protein 1 [Source:MGI Symbol;Acc:MGI:107376]
60. Rps3a1 ENSMUSG00000028081 129.47 1344.99 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
61. Hmgn1 ENSMUSG00000040681 127.92 1328.89 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
62. Rps5 ENSMUSG00000012848 125.60 1304.79 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
63. Pcbp1 ENSMUSG00000051695 124.82 1296.68 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
64. Hbb-bh1 ENSMUSG00000052217 124.05 1288.68 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
65. Rps4x ENSMUSG00000031320 122.50 1272.58 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
66. Trp53i11 ENSMUSG00000068735 120.17 1248.38 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
67. Ywhaz ENSMUSG00000022285 119.40 1240.38 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:MGI Symbol;Acc:MGI:109484]
68. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 117.07 1216.17 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
69. Stmn1 ENSMUSG00000028832 117.07 1216.17 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
70. Gm5805 ENSMUSG00000061848 115.52 1200.07 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
71. Vim ENSMUSG00000026728 113.97 1183.97 vimentin [Source:MGI Symbol;Acc:MGI:98932]
72. Ywhae ENSMUSG00000020849 111.64 1159.76 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
73. Gm14303 ENSMUSG00000081344 110.87 1151.77 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
74. Rpl32 ENSMUSG00000057841 110.87 1151.77 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
75. U2af2 ENSMUSG00000030435 110.09 1143.66 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
76. Sox2 ENSMUSG00000074637 106.99 1111.46 SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
77. Ywhab ENSMUSG00000018326 106.22 1103.46 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
78. Hnrnph1 ENSMUSG00000007850 105.44 1095.36 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
79. Marcks ENSMUSG00000069662 105.44 1095.36 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
80. Igf2 ENSMUSG00000048583 104.67 1087.36 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
81. Cdk4 ENSMUSG00000006728 103.89 1079.25 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
82. Ldha ENSMUSG00000063229 101.56 1055.05 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
83. Marcksl1 ENSMUSG00000047945 101.56 1055.05 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
84. Ranbp1 ENSMUSG00000005732, ENSMUSG00000099164 101.56 1055.05 RAN binding protein 1 [Source:MGI Symbol;Acc:MGI:96269]
85. Ddx5 ENSMUSG00000020719 100.79 1047.05 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
86. Pabpc1 ENSMUSG00000022283 100.01 1038.95 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
87. Rpl37 ENSMUSG00000041841 100.01 1038.95 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
88. Sub1 ENSMUSG00000022205 100.01 1038.95 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
89. Hnrnpa0 ENSMUSG00000007836 99.24 1030.95 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
90. Caprin1 ENSMUSG00000027184 98.46 1022.84 cell cycle associated protein 1 [Source:MGI Symbol;Acc:MGI:1858234]
91. Ndufa12 ENSMUSG00000020022 97.69 1014.85 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
92. Myl6 ENSMUSG00000090841 96.91 1006.74 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
93. Trim28 ENSMUSG00000005566 96.91 1006.74 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
94. Gm17132 ENSMUSG00000061331 96.14 998.74 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
95. Cdkn1c ENSMUSG00000037664 95.36 990.64 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
96. Rps15 ENSMUSG00000063457 94.59 982.64 ribosomal protein S15 [Source:MGI Symbol;Acc:MGI:98117]
97. Srsf3 ENSMUSG00000071172 94.59 982.64 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
98. Morf4l1 ENSMUSG00000062270 93.81 974.54 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
99. Anp32b ENSMUSG00000028333 92.26 958.44 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
100. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 92.26 958.44 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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