Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E11_5_slice_2, section s82.

Sample reads: 96,238. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 4427.54 46006.23 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Nd1 ENSMUSG00000064341 3963.93 41188.89 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
3. mt-Co2 ENSMUSG00000064354 2884.36 29971.16 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
4. mt-Atp6 ENSMUSG00000064357 2821.44 29317.37 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
5. mt-Nd4 ENSMUSG00000064363 2635.99 27390.37 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. mt-Co1 ENSMUSG00000064351 1715.38 17824.38 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
7. mt-Nd3 ENSMUSG00000064360 1414.03 14693.08 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
8. Ptma ENSMUSG00000026238 1192.16 12387.64 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
9. H19 ENSMUSG00000000031 1066.32 11080.05 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
10. mt-Co3 ENSMUSG00000064358 996.78 10357.46 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
11. mt-Nd2 ENSMUSG00000064345 933.86 9703.67 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
12. Actb ENSMUSG00000029580 725.23 7535.81 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
13. Eef1a1 ENSMUSG00000037742 702.05 7294.95 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
14. Igf2 ENSMUSG00000048583 602.70 6262.61 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
15. Col1a1 ENSMUSG00000001506 592.77 6159.43 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
16. mt-Rnr2 ENSMUSG00000064339 589.46 6125.03 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
17. Col1a2 ENSMUSG00000029661 476.86 4955.02 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
18. Mdk ENSMUSG00000027239 463.62 4817.44 midkine [Source:MGI Symbol;Acc:MGI:96949]
19. Col3a1 ENSMUSG00000026043 417.26 4335.72 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
20. Gm13340 ENSMUSG00000083563 417.26 4335.72 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
21. Hbb-y ENSMUSG00000052187 390.76 4060.36 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
22. Gm10800 ENSMUSG00000075014 321.22 3337.77 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
23. Plagl1 ENSMUSG00000019817 281.48 2924.84 pleiomorphic adenoma gene-like 1 [Source:MGI Symbol;Acc:MGI:1100874]
24. mt-Nd5 ENSMUSG00000064367 264.92 2752.76 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
25. Npm1 ENSMUSG00000057113 261.61 2718.37 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
26. Rpsa ENSMUSG00000032518 258.30 2683.98 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
27. Rpl37 ENSMUSG00000041841 241.74 2511.90 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
28. Hba-a1 ENSMUSG00000069919 215.25 2236.65 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
29. Ubb ENSMUSG00000019505 211.94 2202.25 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
30. Rps26 ENSMUSG00000025362 205.32 2133.46 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
31. Rpl23 ENSMUSG00000071415 198.69 2064.57 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
32. Tuba1b ENSMUSG00000023004 195.38 2030.18 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
33. Cfl1 ENSMUSG00000056201 192.07 1995.78 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
34. Tpt1 ENSMUSG00000060126 192.07 1995.78 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
35. Ywhab ENSMUSG00000018326 168.89 1754.92 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
36. Gm5805 ENSMUSG00000061848 162.27 1686.14 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
37. Grb10 ENSMUSG00000020176 158.95 1651.64 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
38. Rpl18a ENSMUSG00000045128 155.64 1617.24 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
39. Sfrp1 ENSMUSG00000031548 155.64 1617.24 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
40. Acta2 ENSMUSG00000035783 152.33 1582.85 actin, alpha 2, smooth muscle, aorta [Source:MGI Symbol;Acc:MGI:87909]
41. Rpl4 ENSMUSG00000032399 152.33 1582.85 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
42. Hba-x ENSMUSG00000055609 149.02 1548.46 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
43. Hsp90aa1 ENSMUSG00000021270 149.02 1548.46 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
44. Nedd4 ENSMUSG00000032216 149.02 1548.46 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
45. Chchd2 ENSMUSG00000070493 142.40 1479.67 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
46. Pkm ENSMUSG00000032294 142.40 1479.67 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
47. Rplp1 ENSMUSG00000007892 142.40 1479.67 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
48. Eef1b2 ENSMUSG00000025967 135.77 1410.78 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
49. Hmga2 ENSMUSG00000056758 135.77 1410.78 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
50. Hnrnpc ENSMUSG00000060373 135.77 1410.78 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
51. Rps20 ENSMUSG00000028234 135.77 1410.78 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
52. Eif4g2 ENSMUSG00000005610 129.15 1341.99 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
53. Meg3 ENSMUSG00000021268 125.84 1307.59 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
54. Tpm1 ENSMUSG00000032366 125.84 1307.59 tropomyosin 1, alpha [Source:MGI Symbol;Acc:MGI:98809]
55. Hba-a2 ENSMUSG00000069917 122.53 1273.20 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
56. Myl6 ENSMUSG00000090841 122.53 1273.20 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
57. Sparc ENSMUSG00000018593 122.53 1273.20 secreted acidic cysteine rich glycoprotein [Source:MGI Symbol;Acc:MGI:98373]
58. Peg3 ENSMUSG00000002265 119.22 1238.81 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
59. Tmsb4x ENSMUSG00000049775 119.22 1238.81 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
60. Eef2 ENSMUSG00000034994 115.90 1204.31 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
61. Hsp90ab1 ENSMUSG00000023944 115.90 1204.31 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
62. Ybx1 ENSMUSG00000028639 115.90 1204.31 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
63. Eif5a ENSMUSG00000078812 112.59 1169.91 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
64. Rps3a1 ENSMUSG00000028081 112.59 1169.91 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
65. Banf1 ENSMUSG00000024844 109.28 1135.52 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
66. Cdkn1c ENSMUSG00000037664 109.28 1135.52 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
67. Dlk1 ENSMUSG00000040856, ENSMUSG00000098411 109.28 1135.52 delta like non-canonical Notch ligand 1 [Source:MGI Symbol;Acc:MGI:94900]
68. Gm14303 ENSMUSG00000081344 109.28 1135.52 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
69. Rps5 ENSMUSG00000012848 109.28 1135.52 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
70. Tubb5 ENSMUSG00000001525 109.28 1135.52 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
71. mt-Rnr1 ENSMUSG00000064337 109.28 1135.52 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
72. Afp ENSMUSG00000054932 105.97 1101.13 alpha fetoprotein [Source:MGI Symbol;Acc:MGI:87951]
73. Fkbp1a ENSMUSG00000032966 105.97 1101.13 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
74. Rps4x ENSMUSG00000031320 105.97 1101.13 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
75. Atp5g3 ENSMUSG00000018770 102.66 1066.73 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
76. Hmgn1 ENSMUSG00000040681 99.35 1032.34 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
77. Rpl32 ENSMUSG00000057841 99.35 1032.34 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
78. Rps15 ENSMUSG00000063457 99.35 1032.34 ribosomal protein S15 [Source:MGI Symbol;Acc:MGI:98117]
79. Igfbp5 ENSMUSG00000026185 96.03 997.84 insulin-like growth factor binding protein 5 [Source:MGI Symbol;Acc:MGI:96440]
80. Serpinh1 ENSMUSG00000070436 96.03 997.84 serine (or cysteine) peptidase inhibitor, clade H, member 1 [Source:MGI Symbol;Acc:MGI:88283]
81. Sub1 ENSMUSG00000022205 96.03 997.84 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
82. Vim ENSMUSG00000026728 96.03 997.84 vimentin [Source:MGI Symbol;Acc:MGI:98932]
83. Arpc2 ENSMUSG00000006304 92.72 963.45 actin related protein 2/3 complex, subunit 2 [Source:MGI Symbol;Acc:MGI:1923959]
84. Ago2 ENSMUSG00000036698 89.41 929.05 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
85. Tsc22d1 ENSMUSG00000022010 89.41 929.05 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
86. Ran ENSMUSG00000029430 86.10 894.66 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
87. Capns1 ENSMUSG00000001794 82.79 860.26 calpain, small subunit 1 [Source:MGI Symbol;Acc:MGI:88266]
88. Cdc42 ENSMUSG00000006699 82.79 860.26 cell division cycle 42 [Source:MGI Symbol;Acc:MGI:106211]
89. Gm10073 ENSMUSG00000060019 82.79 860.26 predicted pseudogene 10073 [Source:MGI Symbol;Acc:MGI:3641908]
90. Hbb-bh1 ENSMUSG00000052217 82.79 860.26 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
91. Lamp1 ENSMUSG00000031447 82.79 860.26 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
92. Marcks ENSMUSG00000069662 82.79 860.26 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
93. Morf4l2 ENSMUSG00000031422 82.79 860.26 mortality factor 4 like 2 [Source:MGI Symbol;Acc:MGI:1927167]
94. Paics ENSMUSG00000029247 82.79 860.26 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
95. Rps8 ENSMUSG00000047675 82.79 860.26 ribosomal protein S8 [Source:MGI Symbol;Acc:MGI:98166]
96. Trim28 ENSMUSG00000005566 82.79 860.26 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
97. Api5 ENSMUSG00000027193 79.48 825.87 apoptosis inhibitor 5 [Source:MGI Symbol;Acc:MGI:1888993]
98. Pbx1 ENSMUSG00000052534 79.48 825.87 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
99. Pcbp1 ENSMUSG00000051695 79.48 825.87 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
100. Rps9 ENSMUSG00000006333 79.48 825.87 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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