Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Mouse_E11_5_slice_2, section s5.

Sample reads: 96,251. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3321.38 34507.34 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Atp6 ENSMUSG00000064357 2360.55 24524.84 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. mt-Co2 ENSMUSG00000064354 2263.68 23518.41 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
4. mt-Nd1 ENSMUSG00000064341 2186.58 22717.38 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. Ptma ENSMUSG00000026238 2154.94 22388.66 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
6. mt-Nd4 ENSMUSG00000064363 2052.14 21320.62 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Co1 ENSMUSG00000064351 1379.96 14337.04 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Co3 ENSMUSG00000064358 816.51 8483.10 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
9. mt-Nd3 ENSMUSG00000064360 792.78 8236.55 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
10. Eef1a1 ENSMUSG00000037742 735.45 7640.93 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
11. Hbb-y ENSMUSG00000052187 717.66 7456.10 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
12. mt-Rnr2 ENSMUSG00000064339 678.12 7045.30 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
13. Mdk ENSMUSG00000027239 571.36 5936.12 midkine [Source:MGI Symbol;Acc:MGI:96949]
14. Actb ENSMUSG00000029580 521.93 5422.57 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
15. H19 ENSMUSG00000000031 488.32 5073.38 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
16. mt-Nd2 ENSMUSG00000064345 442.85 4600.97 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
17. Hba-a1 ENSMUSG00000069919 423.08 4395.57 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
18. Gm10800 ENSMUSG00000075014 387.49 4025.81 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
19. Gm13340 ENSMUSG00000083563 375.63 3902.59 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
20. Hba-x ENSMUSG00000055609 369.70 3840.98 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
21. Pkm ENSMUSG00000032294 260.97 2711.34 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
22. Tubb2b ENSMUSG00000045136 260.97 2711.34 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
23. Tuba1b ENSMUSG00000023004 258.99 2690.77 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
24. Rpsa ENSMUSG00000032518 251.08 2608.59 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
25. Cfl1 ENSMUSG00000056201 247.13 2567.55 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
26. Rpl18a ENSMUSG00000045128 233.29 2423.76 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
27. Tpt1 ENSMUSG00000060126 231.31 2403.19 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
28. Npm1 ENSMUSG00000057113 213.52 2218.36 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
29. Igf2 ENSMUSG00000048583 209.56 2177.21 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
30. Ubb ENSMUSG00000019505 207.59 2156.75 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
31. Nedd4 ENSMUSG00000032216 199.68 2074.57 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
32. Hsp90ab1 ENSMUSG00000023944 197.70 2054.00 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
33. Hba-a2 ENSMUSG00000069917 195.72 2033.42 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
34. Atp5g3 ENSMUSG00000018770 193.75 2012.96 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
35. Eif4g2 ENSMUSG00000005610 187.82 1951.35 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
36. Tubb5 ENSMUSG00000001525 185.84 1930.78 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
37. Tmsb4x ENSMUSG00000049775 183.86 1910.21 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
38. Ran ENSMUSG00000029430 175.95 1828.03 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
39. Rps26 ENSMUSG00000025362 173.98 1807.56 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
40. Chchd2 ENSMUSG00000070493 170.02 1766.42 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
41. Rpl4 ENSMUSG00000032399 160.14 1663.77 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
42. Tuba1a ENSMUSG00000072235 158.16 1643.20 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
43. Eif5a ENSMUSG00000078812 152.23 1581.59 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
44. Hbb-bh1 ENSMUSG00000052217 150.25 1561.02 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
45. mt-Nd5 ENSMUSG00000064367 146.30 1519.98 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
46. Rpl23 ENSMUSG00000071415 144.32 1499.41 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
47. Set ENSMUSG00000054766 140.37 1458.37 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
48. Hnrnpc ENSMUSG00000060373 138.39 1437.80 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
49. Hsp90aa1 ENSMUSG00000021270 134.44 1396.76 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
50. Gm14303 ENSMUSG00000081344 132.46 1376.19 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
51. Vim ENSMUSG00000026728 128.51 1335.15 vimentin [Source:MGI Symbol;Acc:MGI:98932]
52. Hmga2 ENSMUSG00000056758 124.55 1294.01 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
53. Grb10 ENSMUSG00000020176 122.57 1273.44 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
54. Pcbp1 ENSMUSG00000051695 120.60 1252.97 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
55. Ybx1 ENSMUSG00000028639 120.60 1252.97 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
56. Eef1b2 ENSMUSG00000025967 116.64 1211.83 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
57. U2af2 ENSMUSG00000030435 114.67 1191.36 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
58. Rps20 ENSMUSG00000028234 112.69 1170.79 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
59. Rps5 ENSMUSG00000012848 112.69 1170.79 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
60. Rpl37 ENSMUSG00000041841 110.71 1150.22 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
61. Marcks ENSMUSG00000069662 108.74 1129.75 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
62. Rps3a1 ENSMUSG00000028081 108.74 1129.75 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
63. Trp53i11 ENSMUSG00000068735 108.74 1129.75 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
64. Ywhaz ENSMUSG00000022285 108.74 1129.75 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:MGI Symbol;Acc:MGI:109484]
65. Banf1 ENSMUSG00000024844 106.76 1109.18 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
66. Rrm2 ENSMUSG00000020649 106.76 1109.18 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
67. Son ENSMUSG00000022961 106.76 1109.18 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
68. Cdkn1c ENSMUSG00000037664 104.78 1088.61 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
69. Gm5805 ENSMUSG00000061848 102.80 1068.04 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
70. Fkbp1a ENSMUSG00000032966 100.83 1047.57 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
71. Hmgn1 ENSMUSG00000040681 100.83 1047.57 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
72. Ndufa12 ENSMUSG00000020022 100.83 1047.57 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
73. Gm14586 ENSMUSG00000083621 98.85 1027.00 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
74. Rplp1 ENSMUSG00000007892 98.85 1027.00 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
75. Ywhab ENSMUSG00000018326 98.85 1027.00 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
76. Paics ENSMUSG00000029247 96.87 1006.43 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
77. Rpl39-ps ENSMUSG00000036305 96.87 1006.43 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
78. Rps9 ENSMUSG00000006333 96.87 1006.43 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
79. Ywhae ENSMUSG00000020849 94.90 985.96 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
80. Basp1 ENSMUSG00000045763 92.92 965.39 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
81. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 92.92 965.39 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
82. Hnrnpa0 ENSMUSG00000007836 90.94 944.82 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
83. Pbx1 ENSMUSG00000052534 88.97 924.35 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
84. Tsc22d1 ENSMUSG00000022010 88.97 924.35 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
85. Pabpc1 ENSMUSG00000022283 86.99 903.78 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
86. Eef2 ENSMUSG00000034994 85.01 883.21 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
87. Hnrnpa2b1 ENSMUSG00000004980 85.01 883.21 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
88. Map1b ENSMUSG00000052727 85.01 883.21 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
89. Prdx1 ENSMUSG00000028691 85.01 883.21 peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
90. Rps4x ENSMUSG00000031320 85.01 883.21 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
91. Wnt1 ENSMUSG00000022997 85.01 883.21 wingless-type MMTV integration site family, member 1 [Source:MGI Symbol;Acc:MGI:98953]
92. Cd24a ENSMUSG00000047139 83.03 862.64 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
93. Gm5963 ENSMUSG00000052192 83.03 862.64 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
94. Lamp1 ENSMUSG00000031447 83.03 862.64 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
95. Rnd2 ENSMUSG00000001313 83.03 862.64 Rho family GTPase 2 [Source:MGI Symbol;Acc:MGI:1338755]
96. Ssbp3 ENSMUSG00000061887 83.03 862.64 single-stranded DNA binding protein 3 [Source:MGI Symbol;Acc:MGI:1919725]
97. Sub1 ENSMUSG00000022205 83.03 862.64 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
98. Morf4l1 ENSMUSG00000062270 81.06 842.17 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
99. Myl6 ENSMUSG00000090841 81.06 842.17 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
100. Top2a ENSMUSG00000020914 81.06 842.17 topoisomerase (DNA) II alpha [Source:MGI Symbol;Acc:MGI:98790]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA