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Experiment Mouse_E11_5_slice_2, section s27.

Sample reads: 96,250. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3125.09 32468.75 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. Ptma ENSMUSG00000026238 2686.30 27909.86 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Atp6 ENSMUSG00000064357 2518.79 26169.48 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Co2 ENSMUSG00000064354 2272.60 23611.64 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
5. mt-Nd1 ENSMUSG00000064341 2027.10 21060.97 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Nd4 ENSMUSG00000064363 1613.41 16762.85 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Co1 ENSMUSG00000064351 1270.24 13197.42 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Nd3 ENSMUSG00000064360 806.36 8377.84 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
9. H19 ENSMUSG00000000031 775.17 8053.79 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
10. Actb ENSMUSG00000029580 748.04 7771.91 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
11. mt-Co3 ENSMUSG00000064358 720.91 7490.04 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
12. Hbb-y ENSMUSG00000052187 697.18 7243.49 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
13. Eef1a1 ENSMUSG00000037742 655.13 6806.61 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
14. mt-Rnr2 ENSMUSG00000064339 575.78 5982.18 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
15. Igf2 ENSMUSG00000048583 547.98 5693.35 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
16. mt-Nd2 ENSMUSG00000064345 480.83 4995.68 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
17. Mdk ENSMUSG00000027239 467.27 4854.80 midkine [Source:MGI Symbol;Acc:MGI:96949]
18. Hba-a1 ENSMUSG00000069919 415.05 4312.25 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
19. Gm13340 ENSMUSG00000083563 354.01 3678.06 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
20. Hba-x ENSMUSG00000055609 341.81 3551.30 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
21. Tuba1b ENSMUSG00000023004 311.97 3241.28 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
22. Nedd4 ENSMUSG00000032216 270.60 2811.45 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
23. Npm1 ENSMUSG00000057113 260.42 2705.69 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
24. Tubb5 ENSMUSG00000001525 259.07 2691.66 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
25. Tpt1 ENSMUSG00000060126 240.08 2494.36 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
26. Rpsa ENSMUSG00000032518 236.01 2452.07 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
27. Ubb ENSMUSG00000019505 236.01 2452.07 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
28. Cfl1 ENSMUSG00000056201 233.97 2430.88 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
29. Pkm ENSMUSG00000032294 220.41 2289.99 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
30. Cdkn1c ENSMUSG00000037664 218.38 2268.90 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
31. mt-Nd5 ENSMUSG00000064367 214.31 2226.62 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
32. Eif4g2 ENSMUSG00000005610 205.49 2134.98 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
33. Hba-a2 ENSMUSG00000069917 204.81 2127.91 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
34. Hsp90ab1 ENSMUSG00000023944 194.64 2022.25 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
35. Tmsb4x ENSMUSG00000049775 191.93 1994.10 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
36. Hmga2 ENSMUSG00000056758 191.25 1987.03 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
37. Chchd2 ENSMUSG00000070493 185.15 1923.65 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
38. Hbb-bh1 ENSMUSG00000052217 183.11 1902.46 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
39. Rpl4 ENSMUSG00000032399 182.43 1895.39 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
40. Ybx1 ENSMUSG00000028639 172.94 1796.80 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
41. Rpl23 ENSMUSG00000071415 167.51 1740.38 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
42. Grb10 ENSMUSG00000020176 165.48 1719.29 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
43. Hnrnpc ENSMUSG00000060373 164.80 1712.22 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
44. Rps20 ENSMUSG00000028234 157.34 1634.72 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
45. Atp5g3 ENSMUSG00000018770 152.59 1585.36 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
46. Eef1b2 ENSMUSG00000025967 146.49 1521.99 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
47. Eif5a ENSMUSG00000078812 144.45 1500.79 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
48. Ran ENSMUSG00000029430 131.57 1366.97 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
49. Rps26 ENSMUSG00000025362 130.21 1352.84 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
50. Rps4x ENSMUSG00000031320 129.53 1345.78 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
51. Tubb2b ENSMUSG00000045136 129.53 1345.78 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
52. Hsp90aa1 ENSMUSG00000021270 126.82 1317.62 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
53. Pcbp1 ENSMUSG00000051695 126.82 1317.62 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
54. Rpl18a ENSMUSG00000045128 126.14 1310.56 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
55. Myl6 ENSMUSG00000090841 124.11 1289.47 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
56. Banf1 ENSMUSG00000024844 120.72 1254.24 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
57. Hmgn1 ENSMUSG00000040681 120.72 1254.24 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
58. Col3a1 ENSMUSG00000026043 120.04 1247.18 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
59. Pabpc1 ENSMUSG00000022283 117.33 1219.02 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
60. Tuba1a ENSMUSG00000072235 117.33 1219.02 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
61. U2af2 ENSMUSG00000030435 117.33 1219.02 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
62. Rpl37 ENSMUSG00000041841 115.97 1204.89 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
63. Fkbp1a ENSMUSG00000032966 113.26 1176.74 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
64. Marcks ENSMUSG00000069662 113.26 1176.74 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
65. Rps3a1 ENSMUSG00000028081 112.58 1169.67 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
66. Set ENSMUSG00000054766 112.58 1169.67 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
67. Ywhae ENSMUSG00000020849 112.58 1169.67 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
68. Ywhab ENSMUSG00000018326 111.90 1162.61 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
69. Rps9 ENSMUSG00000006333 107.15 1113.26 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
70. Ndufa12 ENSMUSG00000020022 106.48 1106.30 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
71. Trim28 ENSMUSG00000005566 105.80 1099.23 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
72. Anp32b ENSMUSG00000028333 101.73 1056.94 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
73. Paics ENSMUSG00000029247 100.37 1042.81 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
74. Rps5 ENSMUSG00000012848 99.69 1035.75 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
75. Gm5805 ENSMUSG00000061848 99.02 1028.79 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
76. Hnrnpa0 ENSMUSG00000007836 97.66 1014.66 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
77. Tmsb10 ENSMUSG00000079523 96.98 1007.59 thymosin, beta 10 [Source:MGI Symbol;Acc:MGI:109146]
78. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 94.95 986.50 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
79. Sub1 ENSMUSG00000022205 94.27 979.44 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
80. Lamp1 ENSMUSG00000031447 93.59 972.37 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
81. Nnat ENSMUSG00000067786 93.59 972.37 neuronatin [Source:MGI Symbol;Acc:MGI:104716]
82. Cox8a ENSMUSG00000035885 92.23 958.24 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
83. Ddx5 ENSMUSG00000020719 91.56 951.28 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
84. Hnrnpa2b1 ENSMUSG00000004980 88.84 923.02 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
85. Hnrnpk ENSMUSG00000021546 88.84 923.02 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
86. H3f3b ENSMUSG00000016559 86.13 894.87 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
87. Map1b ENSMUSG00000052727 85.45 887.80 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
88. Cdk4 ENSMUSG00000006728 84.77 880.74 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
89. Rpl41 ENSMUSG00000093674 84.77 880.74 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
90. Srsf3 ENSMUSG00000071172 84.77 880.74 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
91. Rpl32 ENSMUSG00000057841 83.42 866.71 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
92. Rpl39-ps ENSMUSG00000036305 83.42 866.71 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
93. Basp1 ENSMUSG00000045763 82.74 859.64 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
94. Morf4l1 ENSMUSG00000062270 82.74 859.64 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
95. Gm14303 ENSMUSG00000081344 82.06 852.58 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
96. Tecr ENSMUSG00000031708 82.06 852.58 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
97. Vim ENSMUSG00000026728 81.38 845.51 vimentin [Source:MGI Symbol;Acc:MGI:98932]
98. Eef2 ENSMUSG00000034994 80.70 838.45 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
99. Ngfrap1 80.70 838.45 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
100. Rpl26 ENSMUSG00000060938 80.70 838.45 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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