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Experiment Mouse_E11_5_slice_2, section s23.

Sample reads: 96,250. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3316.36 34455.88 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. Ptma ENSMUSG00000026238 2742.05 28488.99 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Atp6 ENSMUSG00000064357 2273.40 23619.87 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Nd1 ENSMUSG00000064341 2131.10 22141.42 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Co2 ENSMUSG00000064354 2061.22 21415.39 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Nd4 ENSMUSG00000064363 1965.79 20423.90 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Co1 ENSMUSG00000064351 1261.10 13102.41 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Nd3 ENSMUSG00000064360 716.19 7440.98 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
9. Eef1a1 ENSMUSG00000037742 605.84 6294.48 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
10. mt-Co3 ENSMUSG00000064358 605.42 6290.11 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
11. mt-Rnr2 ENSMUSG00000064339 581.98 6046.58 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
12. Actb ENSMUSG00000029580 566.22 5882.84 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
13. H19 ENSMUSG00000000031 437.13 4541.64 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
14. mt-Nd2 ENSMUSG00000064345 434.57 4515.04 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
15. Hbb-y ENSMUSG00000052187 358.31 3722.72 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
16. Gm13340 ENSMUSG00000083563 348.51 3620.90 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
17. Mdk ENSMUSG00000027239 334.45 3474.82 midkine [Source:MGI Symbol;Acc:MGI:96949]
18. Tubb2b ENSMUSG00000045136 293.55 3049.89 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
19. Igf2 ENSMUSG00000048583 270.97 2815.29 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
20. Cfl1 ENSMUSG00000056201 266.71 2771.03 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
21. Tuba1a ENSMUSG00000072235 264.58 2748.90 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
22. Tubb5 ENSMUSG00000001525 259.89 2700.17 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
23. Tuba1b ENSMUSG00000023004 257.76 2678.04 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
24. Ubb ENSMUSG00000019505 255.63 2655.91 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
25. Nedd4 ENSMUSG00000032216 224.53 2332.79 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
26. Map1b ENSMUSG00000052727 221.55 2301.83 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
27. Tpt1 ENSMUSG00000060126 218.14 2266.40 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
28. Rpsa ENSMUSG00000032518 216.43 2248.64 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
29. Npm1 ENSMUSG00000057113 215.15 2235.34 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
30. Tmsb4x ENSMUSG00000049775 211.75 2200.01 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
31. mt-Nd5 ENSMUSG00000064367 204.08 2120.32 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
32. Pkm ENSMUSG00000032294 198.96 2067.13 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
33. Eif4g2 ENSMUSG00000005610 197.26 2049.47 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
34. Chchd2 ENSMUSG00000070493 191.30 1987.54 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
35. Ybx1 ENSMUSG00000028639 182.35 1894.56 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
36. Atp5g3 ENSMUSG00000018770 175.53 1823.70 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
37. Basp1 ENSMUSG00000045763 170.42 1770.61 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
38. Rpl4 ENSMUSG00000032399 164.45 1708.58 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
39. Hsp90ab1 ENSMUSG00000023944 161.47 1677.62 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
40. Hba-a1 ENSMUSG00000069919 161.05 1673.26 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
41. Pcbp1 ENSMUSG00000051695 160.19 1664.32 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
42. Hsp90aa1 ENSMUSG00000021270 159.34 1655.49 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
43. Hnrnpc ENSMUSG00000060373 157.64 1637.83 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
44. Stmn1 ENSMUSG00000028832 140.17 1456.32 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
45. Ywhab ENSMUSG00000018326 137.61 1429.72 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
46. Fkbp1a ENSMUSG00000032966 135.48 1407.59 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
47. Ran ENSMUSG00000029430 134.21 1394.40 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
48. Set ENSMUSG00000054766 133.35 1385.46 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
49. Hba-x ENSMUSG00000055609 132.93 1381.10 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
50. Stmn2 ENSMUSG00000027500 132.08 1372.27 stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
51. Cdkn1c ENSMUSG00000037664 128.24 1332.37 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
52. Hmga2 ENSMUSG00000056758 126.96 1319.07 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
53. Rps26 ENSMUSG00000025362 126.96 1319.07 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
54. Eef1b2 ENSMUSG00000025967 125.26 1301.41 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
55. Pbx1 ENSMUSG00000052534 125.26 1301.41 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
56. Eif5a ENSMUSG00000078812 124.41 1292.58 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
57. Cd24a ENSMUSG00000047139 123.98 1288.11 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
58. Rpl23 ENSMUSG00000071415 120.57 1252.68 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
59. Tubb3 ENSMUSG00000062380 120.57 1252.68 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
60. Marcks ENSMUSG00000069662 119.72 1243.85 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
61. Ywhae ENSMUSG00000020849 113.75 1181.82 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
62. Grb10 ENSMUSG00000020176 111.62 1159.69 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
63. Hnrnpa0 ENSMUSG00000007836 110.77 1150.86 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
64. Rps4x ENSMUSG00000031320 109.07 1133.20 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
65. Rps20 ENSMUSG00000028234 108.64 1128.73 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
66. Myl6 ENSMUSG00000090841 108.22 1124.37 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
67. U2af2 ENSMUSG00000030435 106.09 1102.24 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
68. Hmgn1 ENSMUSG00000040681 104.81 1088.94 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
69. Banf1 ENSMUSG00000024844 100.97 1049.04 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
70. Gap43 ENSMUSG00000047261 100.12 1040.21 growth associated protein 43 [Source:MGI Symbol;Acc:MGI:95639]
71. Marcksl1 ENSMUSG00000047945 100.12 1040.21 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
72. Malat1 ENSMUSG00000092341 99.70 1035.85 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
73. Tmsb10 ENSMUSG00000079523 99.70 1035.85 thymosin, beta 10 [Source:MGI Symbol;Acc:MGI:109146]
74. Ina ENSMUSG00000034336 99.27 1031.38 internexin neuronal intermediate filament protein, alpha [Source:MGI Symbol;Acc:MGI:96568]
75. Nnat ENSMUSG00000067786 99.27 1031.38 neuronatin [Source:MGI Symbol;Acc:MGI:104716]
76. Sub1 ENSMUSG00000022205 98.42 1022.55 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
77. Pabpc1 ENSMUSG00000022283 97.57 1013.72 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
78. Hbb-bh1 ENSMUSG00000052217 97.14 1009.25 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
79. Hnrnpa2b1 ENSMUSG00000004980 97.14 1009.25 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
80. Calm2 ENSMUSG00000036438 94.58 982.65 calmodulin 2 [Source:MGI Symbol;Acc:MGI:103250]
81. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 94.16 978.29 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
82. Ywhag ENSMUSG00000051391 93.73 973.82 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide [Source:MGI Symbol;Acc:MGI:108109]
83. Vim ENSMUSG00000026728 93.30 969.36 vimentin [Source:MGI Symbol;Acc:MGI:98932]
84. Ndufa12 ENSMUSG00000020022 92.88 964.99 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
85. Ngfrap1 92.88 964.99 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
86. Ywhaq ENSMUSG00000076432 92.88 964.99 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:MGI Symbol;Acc:MGI:891963]
87. Ddx5 ENSMUSG00000020719 92.45 960.52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
88. Gm14303 ENSMUSG00000081344 90.32 938.39 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
89. Hba-a2 ENSMUSG00000069917 90.32 938.39 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
90. Trim28 ENSMUSG00000005566 90.32 938.39 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
91. Tecr ENSMUSG00000031708 89.90 934.03 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
92. Rpl18a ENSMUSG00000045128 89.04 925.10 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
93. Gm9844 ENSMUSG00000091955 88.62 920.73 predicted pseudogene 9844 [Source:MGI Symbol;Acc:MGI:3704288]
94. Morf4l1 ENSMUSG00000062270 88.62 920.73 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
95. Scd2 ENSMUSG00000025203 87.34 907.43 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
96. Paics ENSMUSG00000029247 86.91 902.97 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
97. Gm10800 ENSMUSG00000075014 85.64 889.77 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
98. H3f3b ENSMUSG00000016559 84.78 880.84 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
99. Nefl ENSMUSG00000022055 84.78 880.84 neurofilament, light polypeptide [Source:MGI Symbol;Acc:MGI:97313]
100. Hnrnph1 ENSMUSG00000007850 83.93 872.00 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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