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Experiment Mouse_E11_5_slice_2, section s11.

Sample reads: 96,259. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 2535.48 26340.20 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 2525.36 26235.07 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Atp6 ENSMUSG00000064357 2308.53 23982.50 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Co2 ENSMUSG00000064354 2158.19 22420.67 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
5. mt-Nd1 ENSMUSG00000064341 1880.65 19537.40 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Nd4 ENSMUSG00000064363 1811.26 18816.54 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Co1 ENSMUSG00000064351 1217.14 12644.43 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. Hbb-y ENSMUSG00000052187 904.91 9400.79 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
9. Eef1a1 ENSMUSG00000037742 803.72 8349.56 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
10. mt-Rnr2 ENSMUSG00000064339 715.54 7433.49 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
11. mt-Co3 ENSMUSG00000064358 621.58 6457.37 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
12. mt-Nd3 ENSMUSG00000064360 582.55 6051.90 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
13. Hba-a1 ENSMUSG00000069919 433.66 4505.14 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
14. mt-Nd2 ENSMUSG00000064345 416.32 4325.00 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
15. Gm13340 ENSMUSG00000083563 380.18 3949.55 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
16. Actb ENSMUSG00000029580 367.17 3814.40 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
17. Hba-x ENSMUSG00000055609 338.26 3514.06 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
18. Tubb2b ENSMUSG00000045136 325.25 3378.91 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
19. Rpsa ENSMUSG00000032518 323.80 3363.84 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
20. Tuba1b ENSMUSG00000023004 306.45 3183.60 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
21. Set ENSMUSG00000054766 305.01 3168.64 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
22. Mdk ENSMUSG00000027239 290.55 3018.42 midkine [Source:MGI Symbol;Acc:MGI:96949]
23. Cfl1 ENSMUSG00000056201 273.21 2838.28 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
24. Npm1 ENSMUSG00000057113 264.53 2748.11 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
25. Nedd4 ENSMUSG00000032216 252.97 2628.02 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
26. Ubb ENSMUSG00000019505 245.74 2552.91 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
27. Hsp90ab1 ENSMUSG00000023944 231.29 2402.79 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
28. Ybx1 ENSMUSG00000028639 229.84 2387.73 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
29. Hbb-bh1 ENSMUSG00000052217 225.50 2342.64 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
30. Hsp90aa1 ENSMUSG00000021270 222.61 2312.62 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
31. Eif4g2 ENSMUSG00000005610 221.17 2297.66 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
32. H19 ENSMUSG00000000031 221.17 2297.66 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
33. Tpt1 ENSMUSG00000060126 221.17 2297.66 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
34. Tubb5 ENSMUSG00000001525 216.83 2252.57 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
35. Rrm2 ENSMUSG00000020649 215.39 2237.61 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
36. Atp5g3 ENSMUSG00000018770 212.49 2207.48 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
37. Hba-a2 ENSMUSG00000069917 211.05 2192.52 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
38. Tuba1a ENSMUSG00000072235 206.71 2147.44 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
39. Crabp1 ENSMUSG00000032291 196.59 2042.30 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
40. Rps26 ENSMUSG00000025362 196.59 2042.30 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
41. Hnrnpc ENSMUSG00000060373 193.70 2012.28 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
42. mt-Nd5 ENSMUSG00000064367 193.70 2012.28 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
43. Pkm ENSMUSG00000032294 190.81 1982.26 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
44. Tmsb4x ENSMUSG00000049775 189.37 1967.30 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
45. Rpl23 ENSMUSG00000071415 183.58 1907.15 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
46. Eif5a ENSMUSG00000078812 174.91 1817.08 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
47. Rpl4 ENSMUSG00000032399 173.46 1802.01 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
48. Map1b ENSMUSG00000052727 170.57 1771.99 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
49. Gm10800 ENSMUSG00000075014 150.34 1561.83 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
50. Rps4x ENSMUSG00000031320 150.34 1561.83 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
51. Chchd2 ENSMUSG00000070493 143.11 1486.72 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
52. Gm14303 ENSMUSG00000081344 143.11 1486.72 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
53. Vim ENSMUSG00000026728 143.11 1486.72 vimentin [Source:MGI Symbol;Acc:MGI:98932]
54. Ran ENSMUSG00000029430 141.66 1471.66 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
55. Paics ENSMUSG00000029247 138.77 1441.63 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
56. Rpl18a ENSMUSG00000045128 138.77 1441.63 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
57. Eef1b2 ENSMUSG00000025967 135.88 1411.61 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
58. Banf1 ENSMUSG00000024844 134.44 1396.65 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
59. Rps20 ENSMUSG00000028234 131.54 1366.52 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
60. Rplp1 ENSMUSG00000007892 128.65 1336.50 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
61. Rps9 ENSMUSG00000006333 128.65 1336.50 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
62. Igf2 ENSMUSG00000048583 127.21 1321.54 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
63. Trim28 ENSMUSG00000005566 124.32 1291.52 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
64. Hmga2 ENSMUSG00000056758 122.87 1276.45 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
65. Rps3a1 ENSMUSG00000028081 122.87 1276.45 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
66. Grb10 ENSMUSG00000020176 121.43 1261.49 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
67. Rpl32 ENSMUSG00000057841 121.43 1261.49 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
68. U2af2 ENSMUSG00000030435 121.43 1261.49 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
69. Marcks ENSMUSG00000069662 119.98 1246.43 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
70. Rps5 ENSMUSG00000012848 118.53 1231.37 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
71. Ywhae ENSMUSG00000020849 117.09 1216.41 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
72. Ccnd2 ENSMUSG00000000184 115.64 1201.34 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
73. Pcbp1 ENSMUSG00000051695 115.64 1201.34 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
74. Anp32b ENSMUSG00000028333 111.31 1156.36 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
75. Gm8292 ENSMUSG00000100215 111.31 1156.36 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
76. Pbx1 ENSMUSG00000052534 111.31 1156.36 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
77. Sox2 ENSMUSG00000074637 111.31 1156.36 SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
78. Zic1 ENSMUSG00000032368 111.31 1156.36 zinc finger protein of the cerebellum 1 [Source:MGI Symbol;Acc:MGI:106683]
79. Fkbp1a ENSMUSG00000032966 109.86 1141.30 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
80. Hmgn1 ENSMUSG00000040681 109.86 1141.30 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
81. Hnrnpa2b1 ENSMUSG00000004980 109.86 1141.30 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
82. Gm5805 ENSMUSG00000061848 108.42 1126.34 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
83. Ldha ENSMUSG00000063229 105.52 1096.21 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
84. Pabpc1 ENSMUSG00000022283 105.52 1096.21 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
85. Hnrnph1 ENSMUSG00000007850 102.63 1066.19 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
86. Basp1 ENSMUSG00000045763 101.19 1051.23 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
87. Rpl37 ENSMUSG00000041841 101.19 1051.23 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
88. Serbp1 ENSMUSG00000036371 101.19 1051.23 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
89. Scd2 ENSMUSG00000025203 99.74 1036.16 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
90. Plagl1 ENSMUSG00000019817 96.85 1006.14 pleiomorphic adenoma gene-like 1 [Source:MGI Symbol;Acc:MGI:1100874]
91. Tmpo ENSMUSG00000019961 96.85 1006.14 thymopoietin [Source:MGI Symbol;Acc:MGI:106920]
92. Malat1 ENSMUSG00000092341 93.96 976.12 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
93. Gm5963 ENSMUSG00000052192 92.51 961.05 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
94. Hnrnpa0 ENSMUSG00000007836 92.51 961.05 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
95. Lamp1 ENSMUSG00000031447 92.51 961.05 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
96. Morf4l1 ENSMUSG00000062270 92.51 961.05 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
97. Sub1 ENSMUSG00000022205 92.51 961.05 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
98. Ywhab ENSMUSG00000018326 92.51 961.05 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
99. Ddx5 ENSMUSG00000020719 91.07 946.09 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
100. Eef2 ENSMUSG00000034994 91.07 946.09 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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