Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Mouse_E11_5_slice_1, section s69.

Sample reads: 96,245. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 3942.09 40958.88 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. Ptma ENSMUSG00000026238 3451.03 35856.70 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Cytb ENSMUSG00000064370 3410.11 35431.53 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. mt-Nd1 ENSMUSG00000064341 2932.69 30471.07 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Nd4 ENSMUSG00000064363 2878.13 29904.18 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. mt-Co2 ENSMUSG00000064354 2155.19 22392.73 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
7. mt-Atp6 ENSMUSG00000064357 2059.71 21400.68 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
8. Gm10800 ENSMUSG00000075014 1759.62 18282.70 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
9. mt-Nd2 ENSMUSG00000064345 1364.04 14172.57 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
10. mt-Nd3 ENSMUSG00000064360 1159.44 12046.75 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. mt-Nd5 ENSMUSG00000064367 1009.39 10487.71 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
12. mt-Co1 ENSMUSG00000064351 941.19 9779.10 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
13. Hbb-y ENSMUSG00000052187 722.94 7511.45 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
14. Mdk ENSMUSG00000027239 722.94 7511.45 midkine [Source:MGI Symbol;Acc:MGI:96949]
15. Hba-a1 ENSMUSG00000069919 600.18 6235.96 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
16. Actb ENSMUSG00000029580 572.90 5952.51 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
17. mt-Co3 ENSMUSG00000064358 559.26 5810.79 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
18. Eef1a1 ENSMUSG00000037742 531.98 5527.35 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
19. H19 ENSMUSG00000000031 504.70 5243.91 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
20. Hmga2 ENSMUSG00000056758 436.49 4535.19 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
21. Pkm ENSMUSG00000032294 409.21 4251.75 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
22. Npm1 ENSMUSG00000057113 381.93 3968.31 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
23. mt-Rnr1 ENSMUSG00000064337 354.65 3684.86 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
24. Hba-x ENSMUSG00000055609 341.01 3543.14 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
25. Igf2 ENSMUSG00000048583 327.37 3401.42 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
26. Ubb ENSMUSG00000019505 327.37 3401.42 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
27. Rpl18a ENSMUSG00000045128 286.45 2976.26 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
28. Tubb5 ENSMUSG00000001525 286.45 2976.26 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
29. Hba-a2 ENSMUSG00000069917 272.81 2834.54 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
30. Gm13340 ENSMUSG00000083563 245.53 2551.09 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
31. Hsp90aa1 ENSMUSG00000021270 245.53 2551.09 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
32. Tuba1b ENSMUSG00000023004 231.89 2409.37 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
33. Cfl1 ENSMUSG00000056201 218.25 2267.65 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
34. Nedd4 ENSMUSG00000032216 218.25 2267.65 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
35. Hbb-bh1 ENSMUSG00000052217 204.61 2125.93 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
36. Rpl4 ENSMUSG00000032399 204.61 2125.93 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
37. Grb10 ENSMUSG00000020176 190.97 1984.21 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
38. Tpt1 ENSMUSG00000060126 190.97 1984.21 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
39. Eif4g2 ENSMUSG00000005610 177.33 1842.48 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
40. Rplp1 ENSMUSG00000007892 163.69 1700.76 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
41. Gm5805 ENSMUSG00000061848 150.04 1558.94 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
42. Jund ENSMUSG00000071076, ENSMUSG00000110974 150.04 1558.94 jun D proto-oncogene [Source:MGI Symbol;Acc:MGI:96648]
43. Top2a ENSMUSG00000020914 150.04 1558.94 topoisomerase (DNA) II alpha [Source:MGI Symbol;Acc:MGI:98790]
44. Atp5g3 ENSMUSG00000018770 136.40 1417.22 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
45. Calm1 ENSMUSG00000001175 136.40 1417.22 calmodulin 1 [Source:MGI Symbol;Acc:MGI:88251]
46. Eef1b2 ENSMUSG00000025967 136.40 1417.22 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
47. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 136.40 1417.22 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
48. Hspe1 ENSMUSG00000073676 136.40 1417.22 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
49. Paics ENSMUSG00000029247 136.40 1417.22 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
50. Peg3 ENSMUSG00000002265 136.40 1417.22 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
51. Rpl32 ENSMUSG00000057841 136.40 1417.22 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
52. Rps20 ENSMUSG00000028234 136.40 1417.22 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
53. Set ENSMUSG00000054766 136.40 1417.22 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
54. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 136.40 1417.22 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
55. Slc38a2 ENSMUSG00000022462 136.40 1417.22 solute carrier family 38, member 2 [Source:MGI Symbol;Acc:MGI:1915010]
56. Anp32b ENSMUSG00000028333 122.76 1275.49 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
57. Banf1 ENSMUSG00000024844 122.76 1275.49 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
58. Cd24a ENSMUSG00000047139 122.76 1275.49 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
59. Gm14303 ENSMUSG00000081344 122.76 1275.49 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
60. Hnrnpk ENSMUSG00000021546 122.76 1275.49 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
61. Ndufa12 ENSMUSG00000020022 122.76 1275.49 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
62. Pabpc1 ENSMUSG00000022283 122.76 1275.49 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
63. Rpl23 ENSMUSG00000071415 122.76 1275.49 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
64. Sfpq ENSMUSG00000028820 122.76 1275.49 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:MGI Symbol;Acc:MGI:1918764]
65. Atp5b ENSMUSG00000025393 109.12 1133.77 ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit [Source:MGI Symbol;Acc:MGI:107801]
66. Chchd2 ENSMUSG00000070493 109.12 1133.77 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
67. Cks1b ENSMUSG00000028044 109.12 1133.77 CDC28 protein kinase 1b [Source:MGI Symbol;Acc:MGI:1889208]
68. Eef2 ENSMUSG00000034994 109.12 1133.77 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
69. Eif5a ENSMUSG00000078812 109.12 1133.77 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
70. Hbb-bt ENSMUSG00000073940 109.12 1133.77 hemoglobin, beta adult t chain [Source:MGI Symbol;Acc:MGI:5474850]
71. Hnrnpc ENSMUSG00000060373 109.12 1133.77 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
72. Malat1 ENSMUSG00000092341 109.12 1133.77 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
73. Meg3 ENSMUSG00000021268 109.12 1133.77 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
74. Morf4l2 ENSMUSG00000031422 109.12 1133.77 mortality factor 4 like 2 [Source:MGI Symbol;Acc:MGI:1927167]
75. Mpzl1 ENSMUSG00000026566 109.12 1133.77 myelin protein zero-like 1 [Source:MGI Symbol;Acc:MGI:1915731]
76. Ran ENSMUSG00000029430 109.12 1133.77 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
77. Rrm2 ENSMUSG00000020649 109.12 1133.77 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
78. Trim28 ENSMUSG00000005566 109.12 1133.77 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
79. Uqcrq ENSMUSG00000044894 109.12 1133.77 ubiquinol-cytochrome c reductase, complex III subunit VII [Source:MGI Symbol;Acc:MGI:107807]
80. Vim ENSMUSG00000026728 109.12 1133.77 vimentin [Source:MGI Symbol;Acc:MGI:98932]
81. Ybx1 ENSMUSG00000028639 109.12 1133.77 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
82. Cdk4 ENSMUSG00000006728 95.48 992.05 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
83. Fkbp1a ENSMUSG00000032966 95.48 992.05 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
84. Fubp1 ENSMUSG00000028034 95.48 992.05 far upstream element (FUSE) binding protein 1 [Source:MGI Symbol;Acc:MGI:1196294]
85. Gm14586 ENSMUSG00000083621 95.48 992.05 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
86. Gm15459 ENSMUSG00000100801 95.48 992.05 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
87. Gm26870 ENSMUSG00000097312 95.48 992.05 predicted gene, 26870 [Source:MGI Symbol;Acc:MGI:5477364]
88. Hnrnpa2b1 ENSMUSG00000004980 95.48 992.05 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
89. Hsp90ab1 ENSMUSG00000023944 95.48 992.05 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
90. Kpnb1 ENSMUSG00000001440 95.48 992.05 karyopherin (importin) beta 1 [Source:MGI Symbol;Acc:MGI:107532]
91. Myl6 ENSMUSG00000090841 95.48 992.05 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
92. Pbx1 ENSMUSG00000052534 95.48 992.05 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
93. Psmc1 ENSMUSG00000021178 95.48 992.05 protease (prosome, macropain) 26S subunit, ATPase 1 [Source:MGI Symbol;Acc:MGI:106054]
94. Rpl37 ENSMUSG00000041841 95.48 992.05 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
95. Slc38a5 ENSMUSG00000031170 95.48 992.05 solute carrier family 38, member 5 [Source:MGI Symbol;Acc:MGI:2148066]
96. Tecr ENSMUSG00000031708 95.48 992.05 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
97. Wbp5 95.48 992.05 WW domain binding protein 5
98. Ywhab ENSMUSG00000018326 95.48 992.05 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
99. Ago2 ENSMUSG00000036698 81.84 850.33 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
100. Aldoa ENSMUSG00000030695, ENSMUSG00000114515 81.84 850.33 aldolase A, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87994]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA