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Experiment Mouse_E11_5_slice_1, section s10.

Sample reads: 96,237. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 4202.65 43669.64 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. Ptma ENSMUSG00000026238 4167.70 43306.48 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Cytb ENSMUSG00000064370 3008.49 31261.15 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. mt-Nd4 ENSMUSG00000064363 2206.47 22927.38 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Atp6 ENSMUSG00000064357 1750.96 18194.19 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
6. mt-Nd1 ENSMUSG00000064341 1710.09 17769.51 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
7. mt-Co2 ENSMUSG00000064354 1530.01 15898.30 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. mt-Nd2 ENSMUSG00000064345 1020.01 10598.90 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
9. mt-Co1 ENSMUSG00000064351 970.84 10087.98 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
10. mt-Nd5 ENSMUSG00000064367 767.08 7970.71 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
11. Actb ENSMUSG00000029580 621.96 6462.77 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
12. Hbb-y ENSMUSG00000052187 562.72 5847.21 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
13. mt-Nd3 ENSMUSG00000064360 484.53 5034.74 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
14. mt-Co3 ENSMUSG00000064358 483.94 5028.61 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
15. mt-Rnr1 ENSMUSG00000064337 465.58 4837.83 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
16. Eef1a1 ENSMUSG00000037742 462.03 4800.94 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
17. Hba-a1 ENSMUSG00000069919 373.77 3883.84 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
18. Gm13340 ENSMUSG00000083563 361.33 3754.57 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
19. Mdk ENSMUSG00000027239 351.85 3656.07 midkine [Source:MGI Symbol;Acc:MGI:96949]
20. Hba-x ENSMUSG00000055609 331.71 3446.79 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
21. Tubb5 ENSMUSG00000001525 302.09 3139.01 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
22. Nedd4 ENSMUSG00000032216 300.32 3120.62 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
23. Npm1 ENSMUSG00000057113 299.13 3108.25 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
24. Tuba1b ENSMUSG00000023004 292.02 3034.37 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
25. Tuba1a ENSMUSG00000072235 261.22 2714.33 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
26. Rpsa ENSMUSG00000032518 258.26 2683.57 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
27. H19 ENSMUSG00000000031 251.15 2609.69 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
28. Tmsb4x ENSMUSG00000049775 242.86 2523.55 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
29. Hbb-bh1 ENSMUSG00000052217 239.31 2486.66 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
30. Ubb ENSMUSG00000019505 235.75 2449.67 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
31. Tubb2b ENSMUSG00000045136 231.60 2406.55 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
32. Cfl1 ENSMUSG00000056201 220.94 2295.78 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
33. Eif4g2 ENSMUSG00000005610 214.43 2228.14 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
34. Pkm ENSMUSG00000032294 212.65 2209.64 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
35. Ybx1 ENSMUSG00000028639 210.87 2191.15 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
36. Hsp90ab1 ENSMUSG00000023944 202.58 2105.00 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
37. Rpl4 ENSMUSG00000032399 198.43 2061.88 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
38. Hba-a2 ENSMUSG00000069917 193.10 2006.50 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
39. Tpt1 ENSMUSG00000060126 187.18 1944.98 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
40. Set ENSMUSG00000054766 175.92 1827.98 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
41. Hnrnpc ENSMUSG00000060373 172.37 1791.09 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
42. Hsp90aa1 ENSMUSG00000021270 172.37 1791.09 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
43. Rrm2 ENSMUSG00000020649 171.19 1778.83 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
44. Map1b ENSMUSG00000052727 164.08 1704.95 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
45. Eif5a ENSMUSG00000078812 160.52 1667.96 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
46. Ran ENSMUSG00000029430 159.34 1655.70 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
47. Banf1 ENSMUSG00000024844 158.15 1643.33 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
48. Rps20 ENSMUSG00000028234 151.64 1575.69 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
49. Chchd2 ENSMUSG00000070493 151.05 1569.56 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
50. Rpl23 ENSMUSG00000071415 151.05 1569.56 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
51. Paics ENSMUSG00000029247 148.68 1544.93 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
52. Atp5g3 ENSMUSG00000018770 146.90 1526.43 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
53. Igf2 ENSMUSG00000048583 145.12 1507.94 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
54. U2af2 ENSMUSG00000030435 145.12 1507.94 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
55. Grb10 ENSMUSG00000020176 144.53 1501.81 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
56. Eef1b2 ENSMUSG00000025967 143.35 1489.55 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
57. Gm10800 ENSMUSG00000075014 139.20 1446.42 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
58. Fkbp1a ENSMUSG00000032966 136.24 1415.67 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
59. Rps26 ENSMUSG00000025362 129.72 1347.92 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
60. Rpl18a ENSMUSG00000045128 123.21 1280.27 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
61. Cox8a ENSMUSG00000035885 120.84 1255.65 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
62. Stmn1 ENSMUSG00000028832 115.51 1200.26 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
63. Malat1 ENSMUSG00000092341 113.14 1175.64 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
64. Ndufa12 ENSMUSG00000020022 113.14 1175.64 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
65. Marcks ENSMUSG00000069662 112.54 1169.40 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
66. Rps4x ENSMUSG00000031320 112.54 1169.40 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
67. Rps5 ENSMUSG00000012848 110.77 1151.01 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
68. Myl6 ENSMUSG00000090841 110.18 1144.88 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
69. Pabpc1 ENSMUSG00000022283 108.99 1132.51 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
70. Rplp1 ENSMUSG00000007892 107.21 1114.02 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
71. Ywhab ENSMUSG00000018326 106.62 1107.89 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
72. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 104.84 1089.39 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
73. Cd24a ENSMUSG00000047139 104.25 1083.26 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
74. Ldha ENSMUSG00000063229 103.07 1071.00 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
75. Pcbp1 ENSMUSG00000051695 103.07 1071.00 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
76. Gm14303 ENSMUSG00000081344 101.29 1052.50 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
77. Tubb3 ENSMUSG00000062380 100.70 1046.37 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
78. Anp32b ENSMUSG00000028333 98.92 1027.88 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
79. Trim28 ENSMUSG00000005566 95.96 997.12 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
80. Cadm1 ENSMUSG00000032076 95.37 990.99 cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1889272]
81. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 95.37 990.99 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
82. Lamp1 ENSMUSG00000031447 95.37 990.99 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
83. Trp53i11 ENSMUSG00000068735 94.18 978.62 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
84. Top2a ENSMUSG00000020914 93.59 972.49 topoisomerase (DNA) II alpha [Source:MGI Symbol;Acc:MGI:98790]
85. Vim ENSMUSG00000026728 93.00 966.36 vimentin [Source:MGI Symbol;Acc:MGI:98932]
86. Hmgn1 ENSMUSG00000040681 92.41 960.23 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
87. Hnrnpa0 ENSMUSG00000007836 92.41 960.23 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
88. Hmga2 ENSMUSG00000056758 91.81 954.00 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
89. Morf4l1 ENSMUSG00000062270 91.22 947.86 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
90. Hnrnpk ENSMUSG00000021546 90.63 941.73 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
91. Cdk4 ENSMUSG00000006728 89.44 929.37 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
92. Cdkn1c ENSMUSG00000037664 87.67 910.98 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
93. Rpl32 ENSMUSG00000057841 87.07 904.74 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
94. Hnrnpa2b1 ENSMUSG00000004980 86.48 898.61 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
95. Sub1 ENSMUSG00000022205 85.89 892.48 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
96. Caprin1 ENSMUSG00000027184 85.30 886.35 cell cycle associated protein 1 [Source:MGI Symbol;Acc:MGI:1858234]
97. Basp1 ENSMUSG00000045763 84.70 880.12 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
98. Gm26924 Gm26924 84.70 880.12
99. Ywhae ENSMUSG00000020849 84.70 880.12 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
100. Ywhag ENSMUSG00000051391 84.70 880.12 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide [Source:MGI Symbol;Acc:MGI:108109]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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