Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_3, section s55.

Sample reads: 96,242. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 1909.55 19841.14 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Nd1 ENSMUSG00000064341 1727.45 17949.04 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
3. mt-Cytb ENSMUSG00000064370 1565.77 16269.10 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. mt-Atp6 ENSMUSG00000064357 1470.46 15278.79 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
5. mt-Co1 ENSMUSG00000064351 1290.05 13404.24 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
6. mt-Co2 ENSMUSG00000064354 1072.21 11140.78 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
7. H19 ENSMUSG00000000031 1053.49 10946.27 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
8. mt-Nd4 ENSMUSG00000064363 978.60 10168.13 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
9. mt-Rnr2 ENSMUSG00000064339 959.88 9973.62 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
10. Actb ENSMUSG00000029580 787.99 8187.60 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
11. Igf2 ENSMUSG00000048583 708.00 7356.46 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
12. mt-Co3 ENSMUSG00000064358 692.68 7197.28 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
13. Eef1a1 ENSMUSG00000037742 667.15 6932.01 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
14. Tubb5 ENSMUSG00000001525 568.44 5906.37 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
15. mt-Nd3 ENSMUSG00000064360 442.50 4597.79 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
16. mt-Nd2 ENSMUSG00000064345 425.48 4420.94 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
17. Mdk ENSMUSG00000027239 405.06 4208.77 midkine [Source:MGI Symbol;Acc:MGI:96949]
18. Pkm ENSMUSG00000032294 352.30 3660.57 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
19. Gm13340 ENSMUSG00000083563 350.60 3642.90 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
20. Rpsa ENSMUSG00000032518 348.89 3625.14 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
21. mt-Nd5 ENSMUSG00000064367 323.36 3359.87 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
22. Tuba1b ENSMUSG00000023004 314.86 3271.55 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
23. Npm1 ENSMUSG00000057113 306.35 3183.12 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
24. Ubb ENSMUSG00000019505 292.73 3041.61 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
25. Cdkn1c ENSMUSG00000037664 279.11 2900.09 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
26. Meg3 ENSMUSG00000021268 272.31 2829.43 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
27. Rpl23 ENSMUSG00000071415 251.88 2617.15 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
28. Rpl4 ENSMUSG00000032399 248.48 2581.83 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
29. Hmgn1 ENSMUSG00000040681 241.67 2511.07 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
30. Chchd2 ENSMUSG00000070493 233.16 2422.64 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
31. Hmga2 ENSMUSG00000056758 219.55 2281.23 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
32. Hsp90ab1 ENSMUSG00000023944 211.04 2192.81 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
33. Tpt1 ENSMUSG00000060126 199.12 2068.95 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
34. Col1a2 ENSMUSG00000029661 192.32 1998.30 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
35. Aldoa ENSMUSG00000030695, ENSMUSG00000114515 190.61 1980.53 aldolase A, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87994]
36. Tuba1a ENSMUSG00000072235 190.61 1980.53 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
37. Rps4x ENSMUSG00000031320 180.40 1874.44 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
38. Peg3 ENSMUSG00000002265 173.60 1803.79 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
39. Eif4g2 ENSMUSG00000005610 170.19 1768.36 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
40. Plagl1 ENSMUSG00000019817 170.19 1768.36 pleiomorphic adenoma gene-like 1 [Source:MGI Symbol;Acc:MGI:1100874]
41. Rpl18a ENSMUSG00000045128 170.19 1768.36 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
42. Rps20 ENSMUSG00000028234 156.58 1626.94 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
43. Eef1b2 ENSMUSG00000025967 154.87 1609.17 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
44. Ywhab ENSMUSG00000018326 153.17 1591.51 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
45. mt-Rnr1 ENSMUSG00000064337 151.47 1573.85 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
46. Atp5g3 ENSMUSG00000018770 146.37 1520.85 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
47. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 141.26 1467.76 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
48. Son ENSMUSG00000022961 141.26 1467.76 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
49. Gm8292 ENSMUSG00000100215 139.56 1450.10 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
50. Rplp1 ENSMUSG00000007892 137.86 1432.43 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
51. Grb10 ENSMUSG00000020176 136.15 1414.66 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
52. Itm2a ENSMUSG00000031239 136.15 1414.66 integral membrane protein 2A [Source:MGI Symbol;Acc:MGI:107706]
53. Set ENSMUSG00000054766 134.45 1397.00 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
54. Hsp90aa1 ENSMUSG00000021270 132.75 1379.34 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
55. Rps5 ENSMUSG00000012848 132.75 1379.34 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
56. Rps26 ENSMUSG00000025362 131.05 1361.67 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
57. Lamp1 ENSMUSG00000031447 129.35 1344.01 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
58. Fkbp1a ENSMUSG00000032966 127.64 1326.24 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
59. Igfbp4 ENSMUSG00000017493 125.94 1308.58 insulin-like growth factor binding protein 4 [Source:MGI Symbol;Acc:MGI:96439]
60. Rps9 ENSMUSG00000006333 125.94 1308.58 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
61. H3f3b ENSMUSG00000016559 122.54 1273.25 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
62. Hnrnpk ENSMUSG00000021546 122.54 1273.25 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
63. Ldha ENSMUSG00000063229 122.54 1273.25 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
64. Myl6 ENSMUSG00000090841 120.84 1255.59 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
65. Nedd4 ENSMUSG00000032216 120.84 1255.59 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
66. Col1a1 ENSMUSG00000001506 117.43 1220.15 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
67. Gm5805 ENSMUSG00000061848 117.43 1220.15 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
68. Ddx5 ENSMUSG00000020719 115.73 1202.49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
69. Eef2 ENSMUSG00000034994 115.73 1202.49 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
70. Cdk4 ENSMUSG00000006728 114.03 1184.83 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
71. Eif5a ENSMUSG00000078812 114.03 1184.83 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
72. Serpinh1 ENSMUSG00000070436 114.03 1184.83 serine (or cysteine) peptidase inhibitor, clade H, member 1 [Source:MGI Symbol;Acc:MGI:88283]
73. Hnrnpc ENSMUSG00000060373 112.33 1167.16 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
74. Col3a1 ENSMUSG00000026043 110.62 1149.40 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
75. Sparc ENSMUSG00000018593 110.62 1149.40 secreted acidic cysteine rich glycoprotein [Source:MGI Symbol;Acc:MGI:98373]
76. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 108.92 1131.73 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
77. Ran ENSMUSG00000029430 108.92 1131.73 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
78. Rps3a1 ENSMUSG00000028081 107.22 1114.07 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
79. Erh ENSMUSG00000021131 105.52 1096.40 ERH mRNA splicing and mitosis factor [Source:MGI Symbol;Acc:MGI:108089]
80. Igfbp5 ENSMUSG00000026185 105.52 1096.40 insulin-like growth factor binding protein 5 [Source:MGI Symbol;Acc:MGI:96440]
81. Pabpc1 ENSMUSG00000022283 105.52 1096.40 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
82. Pcbp1 ENSMUSG00000051695 105.52 1096.40 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
83. Trim28 ENSMUSG00000005566 105.52 1096.40 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
84. Tsc22d1 ENSMUSG00000022010 105.52 1096.40 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
85. Ybx1 ENSMUSG00000028639 105.52 1096.40 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
86. Cfl1 ENSMUSG00000056201 103.82 1078.74 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
87. Dlk1 ENSMUSG00000040856, ENSMUSG00000098411 103.82 1078.74 delta like non-canonical Notch ligand 1 [Source:MGI Symbol;Acc:MGI:94900]
88. Eef1g ENSMUSG00000071644 103.82 1078.74 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
89. Pdia6 ENSMUSG00000020571 103.82 1078.74 protein disulfide isomerase associated 6 [Source:MGI Symbol;Acc:MGI:1919103]
90. Anp32b ENSMUSG00000028333 100.41 1043.31 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
91. Rpl41 ENSMUSG00000093674 98.71 1025.64 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
92. Calm1 ENSMUSG00000001175 97.01 1007.98 calmodulin 1 [Source:MGI Symbol;Acc:MGI:88251]
93. Paics ENSMUSG00000029247 95.31 990.32 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
94. Vim ENSMUSG00000026728 95.31 990.32 vimentin [Source:MGI Symbol;Acc:MGI:98932]
95. Gm10800 ENSMUSG00000075014 93.61 972.65 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
96. Scd2 ENSMUSG00000025203 93.61 972.65 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
97. Stmn1 ENSMUSG00000028832 91.90 954.89 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
98. Ncl ENSMUSG00000026234 90.20 937.22 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
99. Ranbp1 ENSMUSG00000005732, ENSMUSG00000099164 90.20 937.22 RAN binding protein 1 [Source:MGI Symbol;Acc:MGI:96269]
100. Arl6ip1 ENSMUSG00000030654 88.50 919.56 ADP-ribosylation factor-like 6 interacting protein 1 [Source:MGI Symbol;Acc:MGI:1858943]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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