Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_3, section s12.

Sample reads: 96,252. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 2119.00 22015.31 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Atp6 ENSMUSG00000064357 1491.40 15494.87 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. mt-Cytb ENSMUSG00000064370 1246.32 12948.62 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. mt-Nd1 ENSMUSG00000064341 1062.90 11042.98 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Nd4 ENSMUSG00000064363 893.06 9278.43 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. Eef1a1 ENSMUSG00000037742 822.52 8545.55 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
7. mt-Co2 ENSMUSG00000064354 755.63 7850.60 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. mt-Co1 ENSMUSG00000064351 743.09 7720.32 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. mt-Rnr2 ENSMUSG00000064339 737.34 7660.58 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
10. Tuba1a ENSMUSG00000072235 690.31 7171.96 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
11. Tubb5 ENSMUSG00000001525 680.90 7074.20 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
12. Actb ENSMUSG00000029580 655.82 6813.63 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
13. Rpsa ENSMUSG00000032518 499.05 5184.87 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
14. mt-Co3 ENSMUSG00000064358 488.08 5070.90 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
15. Tubb2b ENSMUSG00000045136 460.38 4783.11 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
16. Tuba1b ENSMUSG00000023004 441.04 4582.18 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
17. Hbb-y ENSMUSG00000052187 430.07 4468.20 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
18. Pkm ENSMUSG00000032294 427.46 4441.09 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
19. Tmsb4x ENSMUSG00000049775 338.10 3512.68 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
20. mt-Nd3 ENSMUSG00000064360 316.15 3284.63 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
21. Ubb ENSMUSG00000019505 313.02 3252.11 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
22. Chchd2 ENSMUSG00000070493 295.77 3072.90 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
23. Tpt1 ENSMUSG00000060126 293.16 3045.78 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
24. Rpl4 ENSMUSG00000032399 283.23 2942.61 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
25. mt-Nd2 ENSMUSG00000064345 277.48 2882.87 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
26. Npm1 ENSMUSG00000057113 275.91 2866.56 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
27. Rpl18a ENSMUSG00000045128 267.55 2779.71 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
28. H19 ENSMUSG00000000031 266.51 2768.90 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
29. Rpl23 ENSMUSG00000071415 263.37 2736.28 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
30. Rps4x ENSMUSG00000031320 244.04 2535.45 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
31. mt-Nd5 ENSMUSG00000064367 227.84 2367.14 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
32. Hsp90ab1 ENSMUSG00000023944 214.77 2231.35 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
33. Mdk ENSMUSG00000027239 213.73 2220.54 midkine [Source:MGI Symbol;Acc:MGI:96949]
34. Eif4g2 ENSMUSG00000005610 213.21 2215.14 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
35. Rplp1 ENSMUSG00000007892 205.89 2139.09 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
36. Gm13340 ENSMUSG00000083563 191.78 1992.49 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
37. Fkbp1a ENSMUSG00000032966 189.17 1965.38 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
38. Set ENSMUSG00000054766 185.51 1927.35 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
39. Rps20 ENSMUSG00000028234 184.99 1921.95 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
40. Atp5g3 ENSMUSG00000018770 184.47 1916.55 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
41. Hmgn1 ENSMUSG00000040681 184.47 1916.55 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
42. Cfl1 ENSMUSG00000056201 179.76 1867.61 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
43. Hsp90aa1 ENSMUSG00000021270 175.06 1818.78 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
44. Cd24a ENSMUSG00000047139 174.01 1807.87 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
45. Eef1b2 ENSMUSG00000025967 173.49 1802.47 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
46. Cdkn1c ENSMUSG00000037664 168.27 1748.24 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
47. Map1b ENSMUSG00000052727 168.27 1748.24 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
48. Rps9 ENSMUSG00000006333 158.86 1650.47 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
49. Pcbp1 ENSMUSG00000051695 156.77 1628.76 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
50. Eef2 ENSMUSG00000034994 155.72 1617.85 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
51. Rps5 ENSMUSG00000012848 153.11 1590.73 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
52. Eif5a ENSMUSG00000078812 150.50 1563.62 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
53. Igf2 ENSMUSG00000048583 147.36 1530.99 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
54. Myl6 ENSMUSG00000090841 145.80 1514.79 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
55. Hnrnpc ENSMUSG00000060373 145.27 1509.28 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
56. Calm1 ENSMUSG00000001175 144.23 1498.47 calmodulin 1 [Source:MGI Symbol;Acc:MGI:88251]
57. Gm5805 ENSMUSG00000061848 139.52 1449.54 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
58. Gm8292 ENSMUSG00000100215 139.52 1449.54 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
59. Ckb ENSMUSG00000001270 139.00 1444.14 creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
60. Rps26 ENSMUSG00000025362 134.82 1400.71 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
61. Nedd4 ENSMUSG00000032216 131.16 1362.68 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
62. Hmga2 ENSMUSG00000056758 130.64 1357.28 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
63. Ran ENSMUSG00000029430 130.12 1351.88 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
64. Hba-a1 ENSMUSG00000069919 128.03 1330.17 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
65. Ywhab ENSMUSG00000018326 127.51 1324.76 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
66. Eef1g ENSMUSG00000071644 126.98 1319.26 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
67. Serbp1 ENSMUSG00000036371 126.98 1319.26 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
68. Cdk4 ENSMUSG00000006728 125.42 1303.05 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
69. Gm5963 ENSMUSG00000052192 125.42 1303.05 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
70. Stmn1 ENSMUSG00000028832 125.42 1303.05 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
71. Ybx1 ENSMUSG00000028639 125.42 1303.05 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
72. Rps3a1 ENSMUSG00000028081 121.76 1265.02 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
73. Grb10 ENSMUSG00000020176 121.23 1259.52 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
74. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 120.19 1248.71 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
75. Hba-x ENSMUSG00000055609 119.67 1243.31 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
76. Vim ENSMUSG00000026728 116.53 1210.69 vimentin [Source:MGI Symbol;Acc:MGI:98932]
77. Ncl ENSMUSG00000026234 115.49 1199.88 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
78. Scd2 ENSMUSG00000025203 114.96 1194.37 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
79. Hbb-bh1 ENSMUSG00000052217 114.44 1188.97 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
80. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 114.44 1188.97 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
81. Gm14586 ENSMUSG00000083621 113.92 1183.57 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
82. Ddx5 ENSMUSG00000020719 113.40 1178.17 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
83. Btf3 ENSMUSG00000021660 110.26 1145.54 basic transcription factor 3 [Source:MGI Symbol;Acc:MGI:1202875]
84. Ldha ENSMUSG00000063229 110.26 1145.54 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
85. Rpl8 ENSMUSG00000003970 110.26 1145.54 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
86. Hnrnpk ENSMUSG00000021546 109.22 1134.74 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
87. Ywhae ENSMUSG00000020849 107.65 1118.43 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
88. Stmn2 ENSMUSG00000027500 106.60 1107.52 stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
89. H3f3b ENSMUSG00000016559 106.08 1102.12 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
90. Cox8a ENSMUSG00000035885 105.56 1096.71 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
91. Tubb3 ENSMUSG00000062380 103.47 1075.00 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
92. Lamp1 ENSMUSG00000031447 102.95 1069.60 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
93. Trim28 ENSMUSG00000005566 100.85 1047.78 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
94. Ywhag ENSMUSG00000051391 100.85 1047.78 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide [Source:MGI Symbol;Acc:MGI:108109]
95. Son ENSMUSG00000022961 99.81 1036.97 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
96. Srsf3 ENSMUSG00000071172 99.81 1036.97 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
97. Rpl32 ENSMUSG00000057841 99.29 1031.57 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
98. Pabpc1 ENSMUSG00000022283 98.76 1026.07 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
99. Aldoa ENSMUSG00000030695, ENSMUSG00000114515 98.24 1020.66 aldolase A, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87994]
100. Pebp1 ENSMUSG00000032959 95.63 993.55 phosphatidylethanolamine binding protein 1 [Source:MGI Symbol;Acc:MGI:1344408]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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