Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Mouse_E10_5_slice_2, section s68.

Sample reads: 96,247. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 2660.20 27639.25 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Nd1 ENSMUSG00000064341 2572.98 26733.04 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
3. mt-Rnr2 ENSMUSG00000064339 2311.32 24014.41 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
4. mt-Atp6 ENSMUSG00000064357 2093.27 21748.89 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
5. mt-Co2 ENSMUSG00000064354 1918.83 19936.48 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Cytb ENSMUSG00000064370 1831.61 19030.27 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
7. mt-Nd4 ENSMUSG00000064363 1831.61 19030.27 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
8. Mdk ENSMUSG00000027239 1003.03 10421.39 midkine [Source:MGI Symbol;Acc:MGI:96949]
9. mt-Co1 ENSMUSG00000064351 1003.03 10421.39 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
10. mt-Nd2 ENSMUSG00000064345 872.20 9062.08 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
11. mt-Nd3 ENSMUSG00000064360 872.20 9062.08 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
12. H19 ENSMUSG00000000031 741.37 7702.77 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
13. Hmga2 ENSMUSG00000056758 741.37 7702.77 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
14. Actb ENSMUSG00000029580 610.54 6343.46 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
15. Eef1a1 ENSMUSG00000037742 566.93 5890.35 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
16. Gm10800 ENSMUSG00000075014 566.93 5890.35 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
17. Npm1 ENSMUSG00000057113 566.93 5890.35 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
18. Igf2 ENSMUSG00000048583 523.32 5437.25 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
19. Jarid2 ENSMUSG00000038518 436.10 4531.04 jumonji, AT rich interactive domain 2 [Source:MGI Symbol;Acc:MGI:104813]
20. mt-Nd5 ENSMUSG00000064367 436.10 4531.04 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
21. Rpsa ENSMUSG00000032518 392.49 4077.94 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
22. Tuba1b ENSMUSG00000023004 392.49 4077.94 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
23. Chchd2 ENSMUSG00000070493 348.88 3624.83 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
24. Gm13340 ENSMUSG00000083563 348.88 3624.83 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
25. Bmyc ENSMUSG00000049086 305.27 3171.73 brain expressed myelocytomatosis oncogene [Source:MGI Symbol;Acc:MGI:88184]
26. Gm14586 ENSMUSG00000083621 305.27 3171.73 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
27. Rpl32 ENSMUSG00000057841 305.27 3171.73 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
28. Rps20 ENSMUSG00000028234 305.27 3171.73 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
29. Ago2 ENSMUSG00000036698 261.66 2718.62 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
30. Eef1b2 ENSMUSG00000025967 261.66 2718.62 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
31. Hsp90ab1 ENSMUSG00000023944 261.66 2718.62 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
32. Pkm ENSMUSG00000032294 261.66 2718.62 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
33. Rpl39-ps ENSMUSG00000036305 261.66 2718.62 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
34. Rps26 ENSMUSG00000025362 261.66 2718.62 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
35. Set ENSMUSG00000054766 261.66 2718.62 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
36. Tpt1 ENSMUSG00000060126 261.66 2718.62 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
37. 2810417H13Rik 218.05 2265.52 RIKEN cDNA 2810417H13 gene
38. Gm15501 ENSMUSG00000087412 218.05 2265.52 predicted pseudogene 15501 [Source:MGI Symbol;Acc:MGI:3704296]
39. Nedd4 ENSMUSG00000032216 218.05 2265.52 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
40. Ngfrap1 218.05 2265.52 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
41. Rpl18a ENSMUSG00000045128 218.05 2265.52 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
42. Rpl8 ENSMUSG00000003970 218.05 2265.52 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
43. Rps8 ENSMUSG00000047675 218.05 2265.52 ribosomal protein S8 [Source:MGI Symbol;Acc:MGI:98166]
44. Top1 ENSMUSG00000070544 218.05 2265.52 topoisomerase (DNA) I [Source:MGI Symbol;Acc:MGI:98788]
45. Ywhab ENSMUSG00000018326 218.05 2265.52 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
46. mt-Co3 ENSMUSG00000064358 218.05 2265.52 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
47. Asf1b ENSMUSG00000005470 174.44 1812.42 anti-silencing function 1B histone chaperone [Source:MGI Symbol;Acc:MGI:1914179]
48. Chmp5 ENSMUSG00000028419 174.44 1812.42 charged multivesicular body protein 5 [Source:MGI Symbol;Acc:MGI:1924209]
49. Dynll1 ENSMUSG00000009013 174.44 1812.42 dynein light chain LC8-type 1 [Source:MGI Symbol;Acc:MGI:1861457]
50. Eif4h ENSMUSG00000040731 174.44 1812.42 eukaryotic translation initiation factor 4H [Source:MGI Symbol;Acc:MGI:1341822]
51. Eif5a ENSMUSG00000078812 174.44 1812.42 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
52. Fkbp1a ENSMUSG00000032966 174.44 1812.42 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
53. Gm10073 ENSMUSG00000060019 174.44 1812.42 predicted pseudogene 10073 [Source:MGI Symbol;Acc:MGI:3641908]
54. Gm5963 ENSMUSG00000052192 174.44 1812.42 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
55. Hsp90aa1 ENSMUSG00000021270 174.44 1812.42 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
56. Hspa5 ENSMUSG00000026864 174.44 1812.42 heat shock protein 5 [Source:MGI Symbol;Acc:MGI:95835]
57. Lamp1 ENSMUSG00000031447 174.44 1812.42 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
58. Meg3 ENSMUSG00000021268 174.44 1812.42 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
59. Peg3 ENSMUSG00000002265 174.44 1812.42 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
60. Rpl23 ENSMUSG00000071415 174.44 1812.42 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
61. Rpl37 ENSMUSG00000041841 174.44 1812.42 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
62. Rps19-ps6 ENSMUSG00000096942 174.44 1812.42 ribosomal protein S19, pseudogene 6 [Source:MGI Symbol;Acc:MGI:5011818]
63. Strn4 ENSMUSG00000030374 174.44 1812.42 striatin, calmodulin binding protein 4 [Source:MGI Symbol;Acc:MGI:2142346]
64. Top2a ENSMUSG00000020914 174.44 1812.42 topoisomerase (DNA) II alpha [Source:MGI Symbol;Acc:MGI:98790]
65. Tsn ENSMUSG00000026374 174.44 1812.42 translin [Source:MGI Symbol;Acc:MGI:109263]
66. Tubb5 ENSMUSG00000001525 174.44 1812.42 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
67. Ubap2l ENSMUSG00000042520 174.44 1812.42 ubiquitin-associated protein 2-like [Source:MGI Symbol;Acc:MGI:1921633]
68. Ube2b ENSMUSG00000020390 174.44 1812.42 ubiquitin-conjugating enzyme E2B [Source:MGI Symbol;Acc:MGI:102944]
69. Ythdf1 ENSMUSG00000038848 174.44 1812.42 YTH domain family 1 [Source:MGI Symbol;Acc:MGI:1917431]
70. Zmynd11 ENSMUSG00000021156 174.44 1812.42 zinc finger, MYND domain containing 11 [Source:MGI Symbol;Acc:MGI:1913755]
71. mt-Rnr1 ENSMUSG00000064337 174.44 1812.42 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
72. Acad9 ENSMUSG00000027710 130.83 1359.31 acyl-Coenzyme A dehydrogenase family, member 9 [Source:MGI Symbol;Acc:MGI:1914272]
73. Aldoa ENSMUSG00000030695, ENSMUSG00000114515 130.83 1359.31 aldolase A, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87994]
74. Anapc13 ENSMUSG00000035048 130.83 1359.31 anaphase promoting complex subunit 13 [Source:MGI Symbol;Acc:MGI:1916260]
75. Atp5b ENSMUSG00000025393 130.83 1359.31 ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit [Source:MGI Symbol;Acc:MGI:107801]
76. Banf1 ENSMUSG00000024844 130.83 1359.31 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
77. Cbx2 ENSMUSG00000025577 130.83 1359.31 chromobox 2 [Source:MGI Symbol;Acc:MGI:88289]
78. Cd24a ENSMUSG00000047139 130.83 1359.31 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
79. Cfl1 ENSMUSG00000056201 130.83 1359.31 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
80. Crabp1 ENSMUSG00000032291 130.83 1359.31 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
81. Ddx39b ENSMUSG00000019432 130.83 1359.31 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
82. Ddx5 ENSMUSG00000020719 130.83 1359.31 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
83. Eef2 ENSMUSG00000034994 130.83 1359.31 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
84. Eif4g2 ENSMUSG00000005610 130.83 1359.31 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
85. Erh ENSMUSG00000021131 130.83 1359.31 ERH mRNA splicing and mitosis factor [Source:MGI Symbol;Acc:MGI:108089]
86. Fkbp4 ENSMUSG00000030357 130.83 1359.31 FK506 binding protein 4 [Source:MGI Symbol;Acc:MGI:95543]
87. Gas1 ENSMUSG00000052957 130.83 1359.31 growth arrest specific 1 [Source:MGI Symbol;Acc:MGI:95655]
88. Gm10116 Gm10116 130.83 1359.31
89. Gm4617 ENSMUSG00000096544 130.83 1359.31 predicted pseudogene 4617 [Source:MGI Symbol;Acc:MGI:3704225]
90. Gm9844 ENSMUSG00000091955 130.83 1359.31 predicted pseudogene 9844 [Source:MGI Symbol;Acc:MGI:3704288]
91. Gpc3 ENSMUSG00000055653 130.83 1359.31 glypican 3 [Source:MGI Symbol;Acc:MGI:104903]
92. H3f3b ENSMUSG00000016559 130.83 1359.31 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
93. Hbb-y ENSMUSG00000052187 130.83 1359.31 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
94. Hnrnpa1 ENSMUSG00000046434 130.83 1359.31 heterogeneous nuclear ribonucleoprotein A1 [Source:MGI Symbol;Acc:MGI:104820]
95. Hnrnpdl ENSMUSG00000029328 130.83 1359.31 heterogeneous nuclear ribonucleoprotein D-like [Source:MGI Symbol;Acc:MGI:1355299]
96. Hnrnpk ENSMUSG00000021546 130.83 1359.31 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
97. Igfbp5 ENSMUSG00000026185 130.83 1359.31 insulin-like growth factor binding protein 5 [Source:MGI Symbol;Acc:MGI:96440]
98. Krtcap2 ENSMUSG00000042747 130.83 1359.31 keratinocyte associated protein 2 [Source:MGI Symbol;Acc:MGI:1913309]
99. Malat1 ENSMUSG00000092341 130.83 1359.31 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
100. Mbnl2 ENSMUSG00000022139 130.83 1359.31 muscleblind like splicing factor 2 [Source:MGI Symbol;Acc:MGI:2145597]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA