Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Ythdf1

Gene Name Gene ID Reads Annotation
Ythdf1 ENSMUSG00000038848 7664 YTH domain family 1 [Source:MGI Symbol;Acc:MGI:1917431]







Genes with expression patterns similar to Ythdf1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ythdf1 ENSMUSG00000038848 7664 6 1.000 1.000 1.000 1.000 1.000 1.000 YTH domain family 1 [Source:MGI Symbol;Acc:MGI:1917431]
2. Chmp5 ENSMUSG00000028419 5927 0.918 - 0.918 - - - - charged multivesicular body protein 5 [Source:MGI Symbol;Acc:MGI:1924209]
3. Notch3 ENSMUSG00000038146 7232 0.886 0.886 - - - - - notch 3 [Source:MGI Symbol;Acc:MGI:99460]
4. Hat1 ENSMUSG00000027018 4642 0.84 - 0.840 - - - - histone aminotransferase 1 [Source:MGI Symbol;Acc:MGI:96013]
5. Stk24 ENSMUSG00000063410 2458 0.834 0.834 - - - - - serine/threonine kinase 24 [Source:MGI Symbol;Acc:MGI:2385007]
6. Mta2 ENSMUSG00000071646 5360 0.829 - 0.829 - - - - metastasis-associated gene family, member 2 [Source:MGI Symbol;Acc:MGI:1346340]
7. Slc38a6 ENSMUSG00000044712 3143 0.827 0.827 - - - - - solute carrier family 38, member 6 [Source:MGI Symbol;Acc:MGI:3648156]
8. Upf2 ENSMUSG00000043241 1962 0.824 0.824 - - - - - UPF2 regulator of nonsense transcripts homolog (yeast) [Source:MGI Symbol;Acc:MGI:2449307]
9. Ndufaf6 ENSMUSG00000050323 1262 0.817 0.817 - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 6 [Source:MGI Symbol;Acc:MGI:1924197]
10. Smad4 ENSMUSG00000024515 3795 0.817 - 0.817 - - - - SMAD family member 4 [Source:MGI Symbol;Acc:MGI:894293]
11. Sox4 ENSMUSG00000076431 8757 0.817 - 0.817 - - - - SRY (sex determining region Y)-box 4 [Source:MGI Symbol;Acc:MGI:98366]
12. Sep-09 Sep-09 1761 0.816 0.816 - - - - -
13. Spice1 ENSMUSG00000043065 1394 0.813 0.813 - - - - - spindle and centriole associated protein 1 [Source:MGI Symbol;Acc:MGI:1196252]
14. Sema6d ENSMUSG00000027200 1413 0.807 0.807 - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:MGI Symbol;Acc:MGI:2387661]
15. Gpx7 ENSMUSG00000028597 721 0.806 0.806 - - - - - glutathione peroxidase 7 [Source:MGI Symbol;Acc:MGI:1914555]
16. Pcid2 ENSMUSG00000038542 1160 0.798 0.798 - - - - - PCI domain containing 2 [Source:MGI Symbol;Acc:MGI:2443003]
17. Suds3 ENSMUSG00000066900 4024 0.796 0.796 - - - - - suppressor of defective silencing 3 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1919204]
18. Bscl2 ENSMUSG00000071657 1974 0.791 0.791 - - - - - Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:MGI Symbol;Acc:MGI:1298392]
19. Epc2 ENSMUSG00000069495 1867 0.784 0.784 - - - - - enhancer of polycomb homolog 2 [Source:MGI Symbol;Acc:MGI:1278321]
20. Mrpl32 ENSMUSG00000015672 2988 0.783 0.783 - - - - - mitochondrial ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:2137226]
21. Vimp 1184 0.78 0.780 - - - - - VCP-interacting membrane protein
22. 1500009L16Rik ENSMUSG00000087651 807 0.779 0.779 - - - - - RIKEN cDNA 1500009L16 gene [Source:MGI Symbol;Acc:MGI:1917034]
23. Atad3a ENSMUSG00000029036 1530 0.778 0.778 - - - - - ATPase family, AAA domain containing 3A [Source:MGI Symbol;Acc:MGI:1919214]
24. Ampd2 ENSMUSG00000027889 791 0.776 0.776 - - - - - adenosine monophosphate deaminase 2 [Source:MGI Symbol;Acc:MGI:88016]
25. Rufy1 ENSMUSG00000020375 757 0.776 0.776 - - - - - RUN and FYVE domain containing 1 [Source:MGI Symbol;Acc:MGI:2429762]
26. Gm5940 ENSMUSG00000081205 500 0.773 0.773 - - - - - predicted gene 5940 [Source:MGI Symbol;Acc:MGI:3648847]
27. Gimap4 ENSMUSG00000054435 237 0.773 0.773 - - - - - GTPase, IMAP family member 4 [Source:MGI Symbol;Acc:MGI:1349656]
28. Phf2 ENSMUSG00000038025 6410 0.772 0.772 - - - - - PHD finger protein 2 [Source:MGI Symbol;Acc:MGI:1338034]
29. Selt 3460 0.769 0.769 - - - - - selenoprotein T
30. Ndel1 ENSMUSG00000018736 3400 0.766 0.766 - - - - - nudE neurodevelopment protein 1 like 1 [Source:MGI Symbol;Acc:MGI:1932915]
31. Papss1 ENSMUSG00000028032 2736 0.766 0.766 - - - - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:MGI Symbol;Acc:MGI:1330587]
32. Ust ENSMUSG00000047712 319 0.764 0.764 - - - - - uronyl-2-sulfotransferase [Source:MGI Symbol;Acc:MGI:2442406]
33. Dnajc1 ENSMUSG00000026740 1120 0.763 0.763 - - - - - DnaJ heat shock protein family (Hsp40) member C1 [Source:MGI Symbol;Acc:MGI:103268]
34. Git1 ENSMUSG00000011877 5458 0.762 - 0.762 - - - - G protein-coupled receptor kinase-interactor 1 [Source:MGI Symbol;Acc:MGI:1927140]
35. Ebag9 ENSMUSG00000022339 1050 0.762 0.762 - - - - - estrogen receptor-binding fragment-associated gene 9 [Source:MGI Symbol;Acc:MGI:1859920]
36. 4930422G04Rik 4930422G04Rik 748 0.762 0.762 - - - - -
37. Mthfsd ENSMUSG00000031816 2191 0.762 0.762 - - - - - methenyltetrahydrofolate synthetase domain containing [Source:MGI Symbol;Acc:MGI:2679252]
38. Ctdspl2 ENSMUSG00000033411 2738 0.76 0.760 - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 [Source:MGI Symbol;Acc:MGI:1196405]
39. Ube2c ENSMUSG00000001403 11085 0.758 - 0.758 - - - - ubiquitin-conjugating enzyme E2C [Source:MGI Symbol;Acc:MGI:1915862]
40. Fkbp15 ENSMUSG00000066151 780 0.757 0.757 - - - - - FK506 binding protein 15 [Source:MGI Symbol;Acc:MGI:2444782]
41. Cpsf3l 1764 0.755 0.755 - - - - - cleavage and polyadenylation specific factor 3-like, transcript variant X2
42. Heatr1 ENSMUSG00000050244 3121 0.753 0.753 - - - - - HEAT repeat containing 1 [Source:MGI Symbol;Acc:MGI:2442524]
43. Mrpl49 ENSMUSG00000007338 1403 0.752 0.752 - - - - - mitochondrial ribosomal protein L49 [Source:MGI Symbol;Acc:MGI:108180]
44. Rsu1 ENSMUSG00000026727 3876 0.75 0.750 - - - - - Ras suppressor protein 1 [Source:MGI Symbol;Acc:MGI:103040]
45. Afg3l2 ENSMUSG00000024527 3339 0.748 - 0.748 - - - - AFG3-like AAA ATPase 2 [Source:MGI Symbol;Acc:MGI:1916847]
46. Smim11 ENSMUSG00000051989 1776 0.746 0.746 - - - - - small integral membrane protein 11 [Source:MGI Symbol;Acc:MGI:1916186]
47. Pogz ENSMUSG00000038902 4598 0.745 0.745 - - - - - pogo transposable element with ZNF domain [Source:MGI Symbol;Acc:MGI:2442117]
48. Tead1 ENSMUSG00000055320 9676 0.745 - 0.745 - - - - TEA domain family member 1 [Source:MGI Symbol;Acc:MGI:101876]
49. Edem1 ENSMUSG00000030104 2360 0.743 0.743 - - - - - ER degradation enhancer, mannosidase alpha-like 1 [Source:MGI Symbol;Acc:MGI:2180139]
50. Gle1 ENSMUSG00000019715 2053 0.742 - 0.742 - - - - GLE1 RNA export mediator (yeast) [Source:MGI Symbol;Acc:MGI:1921662]
51. Nedd8 ENSMUSG00000010376 10119 0.74 - 0.740 - - - - neural precursor cell expressed, developmentally down-regulated gene 8 [Source:MGI Symbol;Acc:MGI:97301]
52. Appl1 ENSMUSG00000040760 2440 0.739 0.739 - - - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 [Source:MGI Symbol;Acc:MGI:1920243]
53. Gm3550 ENSMUSG00000078240 469 0.739 - 0.739 - - - - predicted gene 3550 [Source:MGI Symbol;Acc:MGI:3781727]
54. Seh1l ENSMUSG00000079614 7707 0.736 - 0.736 - - - - SEH1-like (S. cerevisiae [Source:MGI Symbol;Acc:MGI:1919374]
55. Ikbkap ENSMUSG00000028431 3290 0.735 0.735 - - - - - inhibitor of kappa light polypeptide enhancer in B cells, kinase complex-associated protein [Source:MGI Symbol;Acc:MGI:1914544]
56. Gm12751 ENSMUSG00000062554 1377 0.734 - 0.734 - - - - predicted gene 12751 [Source:MGI Symbol;Acc:MGI:3651049]
57. Pdss1 ENSMUSG00000026784 567 0.734 0.734 - - - - - prenyl (solanesyl) diphosphate synthase, subunit 1 [Source:MGI Symbol;Acc:MGI:1889278]
58. Ppp1r8 ENSMUSG00000028882 2037 0.732 0.732 - - - - - protein phosphatase 1, regulatory subunit 8 [Source:MGI Symbol;Acc:MGI:2140494]
59. Stk25 ENSMUSG00000026277 2131 0.732 0.732 - - - - - serine/threonine kinase 25 (yeast) [Source:MGI Symbol;Acc:MGI:1891699]
60. Tmem30a ENSMUSG00000032328 4977 0.732 - 0.732 - - - - transmembrane protein 30A [Source:MGI Symbol;Acc:MGI:106402]
61. Zfp369 ENSMUSG00000021514 1130 0.731 0.731 - - - - - zinc finger protein 369 [Source:MGI Symbol;Acc:MGI:2176229]
62. Gtf2h5 ENSMUSG00000034345 6035 0.731 0.731 - - - - - general transcription factor IIH, polypeptide 5 [Source:MGI Symbol;Acc:MGI:107227]
63. E330009J07Rik ENSMUSG00000037172 461 0.731 0.731 - - - - - RIKEN cDNA E330009J07 gene [Source:MGI Symbol;Acc:MGI:2444256]
64. Alg2 ENSMUSG00000039740 4275 0.73 0.730 - - - - - asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:MGI Symbol;Acc:MGI:1914731]
65. Ap3b1 ENSMUSG00000021686 3044 0.73 0.730 - - - - - adaptor-related protein complex 3, beta 1 subunit [Source:MGI Symbol;Acc:MGI:1333879]
66. Syncrip ENSMUSG00000032423 12993 0.728 - 0.728 - - - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:MGI Symbol;Acc:MGI:1891690]
67. Dpp8 ENSMUSG00000032393 1163 0.725 0.725 - - - - - dipeptidylpeptidase 8 [Source:MGI Symbol;Acc:MGI:1921638]
68. Rad50 ENSMUSG00000020380 1991 0.725 0.725 - - - - - RAD50 double strand break repair protein [Source:MGI Symbol;Acc:MGI:109292]
69. 1110008P14Rik ENSMUSG00000039195 3077 0.724 0.724 - - - - - RIKEN cDNA 1110008P14 gene [Source:MGI Symbol;Acc:MGI:1920987]
70. Enah ENSMUSG00000022995 1908 0.724 0.724 - - - - - ENAH actin regulator [Source:MGI Symbol;Acc:MGI:108360]
71. Pex14 ENSMUSG00000028975 920 0.723 0.723 - - - - - peroxisomal biogenesis factor 14 [Source:MGI Symbol;Acc:MGI:1927868]
72. Tmem164 ENSMUSG00000047045 1810 0.721 0.721 - - - - - transmembrane protein 164 [Source:MGI Symbol;Acc:MGI:2148020]
73. Lamtor4 ENSMUSG00000050552 1199 0.72 - 0.720 - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 [Source:MGI Symbol;Acc:MGI:1913346]
74. Tpt1-ps3 ENSMUSG00000084319 9840 0.72 0.720 - - - - - tumor protein, translationally-controlled, pseudogene 3 [Source:MGI Symbol;Acc:MGI:2664997]
75. Runx2 ENSMUSG00000039153 319 0.719 - 0.719 - - - - runt related transcription factor 2 [Source:MGI Symbol;Acc:MGI:99829]
76. Slc15a4 ENSMUSG00000029416 453 0.719 - 0.719 - - - - solute carrier family 15, member 4 [Source:MGI Symbol;Acc:MGI:2140796]
77. D15Ertd621e D15Ertd621e 4078 0.718 0.718 - - - - -
78. Pcyox1 ENSMUSG00000029998 2796 0.718 - 0.718 - - - - prenylcysteine oxidase 1 [Source:MGI Symbol;Acc:MGI:1914131]
79. AI597468 AI597468 3278 0.718 - 0.718 - - - -
80. Trpc4ap ENSMUSG00000038324 3417 0.717 - 0.717 - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein [Source:MGI Symbol;Acc:MGI:1930751]
81. Gm9769 12765 0.717 0.717 - - - - - predicted pseudogene 9769
82. Mtmr4 ENSMUSG00000018401 2629 0.717 0.717 - - - - - myotubularin related protein 4 [Source:MGI Symbol;Acc:MGI:2180699]
83. BC016423 BC016423 753 0.717 - 0.717 - - - -
84. Malsu1 ENSMUSG00000029815 1252 0.715 0.715 - - - - - mitochondrial assembly of ribosomal large subunit 1 [Source:MGI Symbol;Acc:MGI:1922843]
85. Plcg1 ENSMUSG00000016933 2046 0.715 - 0.715 - - - - phospholipase C, gamma 1 [Source:MGI Symbol;Acc:MGI:97615]
86. Mfsd1 ENSMUSG00000027775 1963 0.715 0.715 - - - - - major facilitator superfamily domain containing 1 [Source:MGI Symbol;Acc:MGI:1914118]
87. Dnlz ENSMUSG00000075467 1790 0.715 0.715 - - - - - DNL-type zinc finger [Source:MGI Symbol;Acc:MGI:106559]
88. Creb3l2 ENSMUSG00000038648 1476 0.714 0.714 - - - - - cAMP responsive element binding protein 3-like 2 [Source:MGI Symbol;Acc:MGI:2442695]
89. Rpp30 ENSMUSG00000024800 2200 0.714 0.714 - - - - - ribonuclease P/MRP 30 subunit [Source:MGI Symbol;Acc:MGI:1859683]
90. Lins Lins 913 0.714 0.714 - - - - -
91. Mrps24 ENSMUSG00000020477 1459 0.714 - 0.714 - - - - mitochondrial ribosomal protein S24 [Source:MGI Symbol;Acc:MGI:1928142]
92. Ogfrl1 ENSMUSG00000026158 1984 0.714 0.714 - - - - - opioid growth factor receptor-like 1 [Source:MGI Symbol;Acc:MGI:1917405]
93. Schip1 ENSMUSG00000027777 1140 0.714 0.714 - - - - - schwannomin interacting protein 1 [Source:MGI Symbol;Acc:MGI:1353557]
94. Mettl17 ENSMUSG00000004561 924 0.713 0.713 - - - - - methyltransferase like 17 [Source:MGI Symbol;Acc:MGI:1098577]
95. Strada ENSMUSG00000069631 5245 0.713 0.713 - - - - - STE20-related kinase adaptor alpha [Source:MGI Symbol;Acc:MGI:1919399]
96. Ate1 ENSMUSG00000030850 1007 0.713 0.713 - - - - - arginyltransferase 1 [Source:MGI Symbol;Acc:MGI:1333870]
97. Leprel2 Leprel2 1004 0.713 0.713 - - - - -
98. E130307A14Rik ENSMUSG00000087177 1348 0.712 0.712 - - - - - RIKEN cDNA E130307A14 gene [Source:MGI Symbol;Acc:MGI:3036287]
99. Rela ENSMUSG00000024927 650 0.712 0.712 - - - - - v-rel reticuloendotheliosis viral oncogene homolog A (avian) [Source:MGI Symbol;Acc:MGI:103290]
100. Thg1l ENSMUSG00000011254 324 0.712 0.712 - - - - - tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913878]

There are 29 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA