Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Mouse_E10_5_slice_1, section s52.

Sample reads: 96,253. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 5215.88 54189.53 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. mt-Atp6 ENSMUSG00000064357 2547.77 26469.64 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. mt-Cytb ENSMUSG00000064370 2439.89 25348.84 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. mt-Co2 ENSMUSG00000064354 2095.48 21770.65 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
5. mt-Nd1 ENSMUSG00000064341 1850.66 19227.13 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. Ptma ENSMUSG00000026238 1813.32 18839.19 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
7. mt-Nd4 ENSMUSG00000064363 1406.67 14614.37 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
8. mt-Co1 ENSMUSG00000064351 1344.43 13967.74 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. mt-Nd3 ENSMUSG00000064360 1286.34 13364.22 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
10. mt-Rnr1 ENSMUSG00000064337 1128.66 11726.03 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
11. mt-Nd5 ENSMUSG00000064367 1053.97 10950.05 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
12. mt-Nd2 ENSMUSG00000064345 908.73 9441.10 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
13. Actb ENSMUSG00000029580 784.25 8147.84 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
14. Eef1a1 ENSMUSG00000037742 684.66 7113.16 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
15. Mdk ENSMUSG00000027239 522.83 5431.86 midkine [Source:MGI Symbol;Acc:MGI:96949]
16. Igf2 ENSMUSG00000048583 419.10 4354.17 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
17. mt-Co3 ENSMUSG00000064358 390.05 4052.36 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
18. Rpsa ENSMUSG00000032518 385.90 4009.24 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
19. Npm1 ENSMUSG00000057113 340.26 3535.08 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
20. H19 ENSMUSG00000000031 311.21 3233.27 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
21. Gm10800 ENSMUSG00000075014 294.61 3060.80 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
22. Peg3 ENSMUSG00000002265 253.12 2629.75 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
23. Nedd4 ENSMUSG00000032216 244.82 2543.52 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
24. Rpl23 ENSMUSG00000071415 207.47 2155.48 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
25. Cfl1 ENSMUSG00000056201 203.32 2112.36 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
26. Tuba1b ENSMUSG00000023004 195.03 2026.23 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
27. Hmgn1 ENSMUSG00000040681 190.88 1983.12 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
28. Marcks ENSMUSG00000069662 190.88 1983.12 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
29. Gm13340 ENSMUSG00000083563 182.58 1896.89 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
30. Malat1 ENSMUSG00000092341 182.58 1896.89 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
31. Tubb5 ENSMUSG00000001525 178.43 1853.77 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
32. Atp5g3 ENSMUSG00000018770 174.28 1810.65 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
33. Rps4x ENSMUSG00000031320 174.28 1810.65 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
34. Wbp5 174.28 1810.65 WW domain binding protein 5
35. Hsp90ab1 ENSMUSG00000023944 170.13 1767.54 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
36. Ran ENSMUSG00000029430 170.13 1767.54 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
37. Col1a1 ENSMUSG00000001506 165.98 1724.42 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
38. Tpt1 ENSMUSG00000060126 165.98 1724.42 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
39. Ybx1 ENSMUSG00000028639 165.98 1724.42 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
40. Pcbp1 ENSMUSG00000051695 161.83 1681.31 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
41. Eef1b2 ENSMUSG00000025967 157.68 1638.19 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
42. Rpl4 ENSMUSG00000032399 157.68 1638.19 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
43. Rpl32 ENSMUSG00000057841 153.53 1595.07 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
44. Rplp1 ENSMUSG00000007892 153.53 1595.07 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
45. Eif5a ENSMUSG00000078812 149.38 1551.96 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
46. Rps3a1 ENSMUSG00000028081 145.23 1508.84 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
47. Hmga2 ENSMUSG00000056758 141.08 1465.73 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
48. Hnrnpc ENSMUSG00000060373 141.08 1465.73 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
49. Tmsb4x ENSMUSG00000049775 141.08 1465.73 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
50. Anp32b ENSMUSG00000028333 136.93 1422.61 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
51. Chchd2 ENSMUSG00000070493 136.93 1422.61 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
52. Ngfrap1 136.93 1422.61 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
53. Son ENSMUSG00000022961 136.93 1422.61 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
54. Gm17132 ENSMUSG00000061331 132.78 1379.50 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
55. Hsp90aa1 ENSMUSG00000021270 132.78 1379.50 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
56. Pbx1 ENSMUSG00000052534 132.78 1379.50 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
57. Rps20 ENSMUSG00000028234 132.78 1379.50 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
58. Rpl8 ENSMUSG00000003970 128.63 1336.38 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
59. Tpm1 ENSMUSG00000032366 128.63 1336.38 tropomyosin 1, alpha [Source:MGI Symbol;Acc:MGI:98809]
60. H3f3b ENSMUSG00000016559 124.48 1293.26 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
61. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 124.48 1293.26 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
62. Pabpc1 ENSMUSG00000022283 124.48 1293.26 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
63. Rps26 ENSMUSG00000025362 124.48 1293.26 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
64. Ubb ENSMUSG00000019505 124.48 1293.26 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
65. Gm14586 ENSMUSG00000083621 120.33 1250.15 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
66. Rpl26 ENSMUSG00000060938 120.33 1250.15 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
67. Rpl39-ps ENSMUSG00000036305 120.33 1250.15 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
68. 2810417H13Rik 116.19 1207.14 RIKEN cDNA 2810417H13 gene
69. Eef2 ENSMUSG00000034994 116.19 1207.14 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
70. Set ENSMUSG00000054766 112.04 1164.02 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
71. Grb10 ENSMUSG00000020176 107.89 1120.91 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
72. Marcksl1 ENSMUSG00000047945 107.89 1120.91 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
73. Rpl37 ENSMUSG00000041841 107.89 1120.91 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
74. Eif4g2 ENSMUSG00000005610 103.74 1077.79 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
75. Gm8292 ENSMUSG00000100215 99.59 1034.67 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
76. Gnb2l1 Gnb2l1 99.59 1034.67
77. Hnrnpa2b1 ENSMUSG00000004980 99.59 1034.67 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
78. Rpl13a ENSMUSG00000074129 99.59 1034.67 ribosomal protein L13A [Source:MGI Symbol;Acc:MGI:1351455]
79. Rpl7 ENSMUSG00000043716 99.59 1034.67 ribosomal protein L7 [Source:MGI Symbol;Acc:MGI:98073]
80. Ywhab ENSMUSG00000018326 99.59 1034.67 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
81. Hnrnpk ENSMUSG00000021546 95.44 991.56 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
82. Sfrp1 ENSMUSG00000031548 95.44 991.56 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
83. Hbb-y ENSMUSG00000052187 91.29 948.44 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
84. Meg3 ENSMUSG00000021268 91.29 948.44 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
85. Col3a1 ENSMUSG00000026043 87.14 905.33 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
86. Nucks1 ENSMUSG00000026434 87.14 905.33 nuclear casein kinase and cyclin-dependent kinase substrate 1 [Source:MGI Symbol;Acc:MGI:1934811]
87. Ago2 ENSMUSG00000036698 82.99 862.21 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
88. Cks1b ENSMUSG00000028044 82.99 862.21 CDC28 protein kinase 1b [Source:MGI Symbol;Acc:MGI:1889208]
89. Gm21897 ENSMUSG00000094472 82.99 862.21 predicted gene, 21897 [Source:MGI Symbol;Acc:MGI:5434061]
90. Mrfap1 ENSMUSG00000055302 82.99 862.21 Morf4 family associated protein 1 [Source:MGI Symbol;Acc:MGI:1914818]
91. Rbms1 ENSMUSG00000026970 82.99 862.21 RNA binding motif, single stranded interacting protein 1 [Source:MGI Symbol;Acc:MGI:1861774]
92. Rps5 ENSMUSG00000012848 82.99 862.21 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
93. Ywhaz ENSMUSG00000022285 82.99 862.21 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:MGI Symbol;Acc:MGI:109484]
94. Ddx5 ENSMUSG00000020719 78.84 819.10 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
95. Gm26870 ENSMUSG00000097312 78.84 819.10 predicted gene, 26870 [Source:MGI Symbol;Acc:MGI:5477364]
96. Gm5805 ENSMUSG00000061848 78.84 819.10 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
97. Oaz1 ENSMUSG00000035242 78.84 819.10 ornithine decarboxylase antizyme 1 [Source:MGI Symbol;Acc:MGI:109433]
98. Srsf3 ENSMUSG00000071172 78.84 819.10 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
99. Vim ENSMUSG00000026728 78.84 819.10 vimentin [Source:MGI Symbol;Acc:MGI:98932]
100. Gm15459 ENSMUSG00000100801 74.69 775.98 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA