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Experiment Mouse_E10_5_slice_1, section s51.

Sample reads: 96,255. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 5185.09 53868.45 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. mt-Cytb ENSMUSG00000064370 2856.01 29671.39 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Atp6 ENSMUSG00000064357 2232.43 23192.95 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. Ptma ENSMUSG00000026238 1933.11 20083.29 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
5. mt-Co2 ENSMUSG00000064354 1789.68 18593.18 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Nd1 ENSMUSG00000064341 1577.67 16390.58 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
7. mt-Rnr1 ENSMUSG00000064337 1325.11 13766.71 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
8. mt-Nd4 ENSMUSG00000064363 1275.23 13248.50 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
9. mt-Co1 ENSMUSG00000064351 1209.75 12568.22 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
10. mt-Nd5 ENSMUSG00000064367 988.38 10268.38 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
11. mt-Nd3 ENSMUSG00000064360 947.85 9847.31 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
12. mt-Nd2 ENSMUSG00000064345 897.96 9329.00 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
13. Actb ENSMUSG00000029580 788.83 8195.24 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
14. Gm10800 ENSMUSG00000075014 676.59 7029.17 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
15. Igf2 ENSMUSG00000048583 598.64 6219.33 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
16. Eef1a1 ENSMUSG00000037742 526.93 5474.33 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
17. H19 ENSMUSG00000000031 452.10 4696.91 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
18. Mdk ENSMUSG00000027239 430.27 4470.12 midkine [Source:MGI Symbol;Acc:MGI:96949]
19. mt-Co3 ENSMUSG00000064358 389.74 4049.05 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
20. Rpsa ENSMUSG00000032518 380.39 3951.91 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
21. Gm17132 ENSMUSG00000061331 374.15 3887.08 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
22. Npm1 ENSMUSG00000057113 311.79 3239.22 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
23. Hbb-y ENSMUSG00000052187 243.20 2526.63 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
24. Hsp90ab1 ENSMUSG00000023944 233.84 2429.39 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
25. Nedd4 ENSMUSG00000032216 233.84 2429.39 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
26. Gm26870 ENSMUSG00000097312 230.73 2397.08 predicted gene, 26870 [Source:MGI Symbol;Acc:MGI:5477364]
27. Peg3 ENSMUSG00000002265 224.49 2332.25 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
28. Rps3a1 ENSMUSG00000028081 202.66 2105.46 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
29. Tuba1b ENSMUSG00000023004 190.19 1975.90 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
30. Cfl1 ENSMUSG00000056201 180.84 1878.77 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
31. Rpl23 ENSMUSG00000071415 180.84 1878.77 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
32. Malat1 ENSMUSG00000092341 177.72 1846.35 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
33. Rplp1 ENSMUSG00000007892 174.60 1813.94 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
34. Ybx1 ENSMUSG00000028639 174.60 1813.94 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
35. Gm13340 ENSMUSG00000083563 168.37 1749.21 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
36. Eef1b2 ENSMUSG00000025967 165.25 1716.80 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
37. Tpt1 ENSMUSG00000060126 165.25 1716.80 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
38. Tmsb4x ENSMUSG00000049775 152.78 1587.25 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
39. Eif5a ENSMUSG00000078812 146.54 1522.42 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
40. Eef2 ENSMUSG00000034994 143.42 1490.01 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
41. Ran ENSMUSG00000029430 143.42 1490.01 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
42. Son ENSMUSG00000022961 143.42 1490.01 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
43. Tubb5 ENSMUSG00000001525 143.42 1490.01 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
44. Eif4g2 ENSMUSG00000005610 140.31 1457.70 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
45. Pkm ENSMUSG00000032294 140.31 1457.70 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
46. Rps26 ENSMUSG00000025362 140.31 1457.70 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
47. Pabpc1 ENSMUSG00000022283 134.07 1392.87 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
48. Pcbp1 ENSMUSG00000051695 134.07 1392.87 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
49. Rpl4 ENSMUSG00000032399 134.07 1392.87 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
50. Chchd2 ENSMUSG00000070493 130.95 1360.45 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
51. Meg3 ENSMUSG00000021268 130.95 1360.45 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
52. Set ENSMUSG00000054766 130.95 1360.45 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
53. Hmga2 ENSMUSG00000056758 127.83 1328.04 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
54. Rps4x ENSMUSG00000031320 127.83 1328.04 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
55. Rps9 ENSMUSG00000006333 127.83 1328.04 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
56. Atp5g3 ENSMUSG00000018770 124.72 1295.73 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
57. Hnrnpc ENSMUSG00000060373 121.60 1263.32 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
58. Hsp90aa1 ENSMUSG00000021270 121.60 1263.32 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
59. Rps20 ENSMUSG00000028234 121.60 1263.32 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
60. Rpl39-ps ENSMUSG00000036305 118.48 1230.90 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
61. Ubb ENSMUSG00000019505 118.48 1230.90 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
62. H3f3b ENSMUSG00000016559 115.36 1198.49 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
63. Igfbp5 ENSMUSG00000026185 115.36 1198.49 insulin-like growth factor binding protein 5 [Source:MGI Symbol;Acc:MGI:96440]
64. Gm14586 ENSMUSG00000083621 109.13 1133.76 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
65. Grb10 ENSMUSG00000020176 109.13 1133.76 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
66. Ngfrap1 109.13 1133.76 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
67. Wbp5 109.13 1133.76 WW domain binding protein 5
68. Col1a1 ENSMUSG00000001506 106.01 1101.35 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
69. Hmgn1 ENSMUSG00000040681 102.89 1068.94 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
70. Tuba1a ENSMUSG00000072235 102.89 1068.94 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
71. Hnrnpk ENSMUSG00000021546 99.77 1036.52 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
72. Marcks ENSMUSG00000069662 99.77 1036.52 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
73. Rpl18a ENSMUSG00000045128 99.77 1036.52 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
74. Rpl37 ENSMUSG00000041841 99.77 1036.52 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
75. Ywhab ENSMUSG00000018326 99.77 1036.52 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
76. Banf1 ENSMUSG00000024844 96.66 1004.21 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
77. Marcksl1 ENSMUSG00000047945 96.66 1004.21 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
78. Tsc22d1 ENSMUSG00000022010 96.66 1004.21 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
79. Hnrnpa2b1 ENSMUSG00000004980 93.54 971.80 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
80. Rps5 ENSMUSG00000012848 93.54 971.80 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
81. Trim28 ENSMUSG00000005566 93.54 971.80 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
82. Ywhae ENSMUSG00000020849 93.54 971.80 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
83. Fkbp1a ENSMUSG00000032966 90.42 939.38 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
84. Sfrp1 ENSMUSG00000031548 90.42 939.38 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
85. Anp32b ENSMUSG00000028333 87.30 906.97 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
86. Fn1 ENSMUSG00000026193 87.30 906.97 fibronectin 1 [Source:MGI Symbol;Acc:MGI:95566]
87. Hnrnph1 ENSMUSG00000007850 87.30 906.97 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
88. Sparc ENSMUSG00000018593 87.30 906.97 secreted acidic cysteine rich glycoprotein [Source:MGI Symbol;Acc:MGI:98373]
89. Gm13936 ENSMUSG00000085444 84.18 874.55 predicted gene 13936 [Source:MGI Symbol;Acc:MGI:3651878]
90. Morf4l1 ENSMUSG00000062270 84.18 874.55 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
91. Pbx1 ENSMUSG00000052534 84.18 874.55 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
92. Rrm2 ENSMUSG00000020649 84.18 874.55 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
93. Serbp1 ENSMUSG00000036371 84.18 874.55 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
94. Serpinh1 ENSMUSG00000070436 84.18 874.55 serine (or cysteine) peptidase inhibitor, clade H, member 1 [Source:MGI Symbol;Acc:MGI:88283]
95. Tpm4 ENSMUSG00000031799 84.18 874.55 tropomyosin 4 [Source:MGI Symbol;Acc:MGI:2449202]
96. Vim ENSMUSG00000026728 84.18 874.55 vimentin [Source:MGI Symbol;Acc:MGI:98932]
97. 2810417H13Rik 81.07 842.24 RIKEN cDNA 2810417H13 gene
98. Hba-x ENSMUSG00000055609 81.07 842.24 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
99. Rpl32 ENSMUSG00000057841 81.07 842.24 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
100. Col3a1 ENSMUSG00000026043 77.95 809.83 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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