Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s99.

Sample reads: 391,647. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 12474.30 31854.25 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 6911.30 17648.63 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. SFRP1 ENSG00000104332 5517.94 14090.56 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
4. AFP ENSG00000081051 3857.71 9851.01 alpha fetoprotein [Source:HGNC Symbol;Acc:HGNC:317]
5. RPS12 ENSG00000112306 3278.88 8372.92 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
6. RPS27 ENSG00000177954 3209.56 8195.90 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
7. PPIA ENSG00000196262 3001.60 7664.86 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
8. APOA2 ENSG00000158874 2980.80 7611.74 apolipoprotein A2 [Source:HGNC Symbol;Acc:HGNC:601]
9. ACTB ENSG00000075624 2592.60 6620.44 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
10. RPL10A ENSG00000198755 2505.95 6399.17 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
11. MTRNR2L8 ENSG00000255823 2294.52 5859.26 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
12. RPL34 ENSG00000109475 2048.43 5230.85 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
13. RPL31 ENSG00000071082 2044.97 5222.01 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
14. RPL5 ENSG00000122406 1992.98 5089.25 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
15. RPL15 ENSG00000174748 1954.85 4991.89 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
16. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1944.45 4965.33 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
17. TUBA1B ENSG00000123416 1816.21 4637.86 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
18. COL3A1 ENSG00000168542 1767.68 4513.93 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
19. RPS20 ENSG00000008988 1719.16 4390.03 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
20. RPL37 ENSG00000145592 1712.23 4372.33 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
21. MTRNR2L1 ENSG00000256618 1708.76 4363.47 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
22. RPS23 ENSG00000186468 1646.37 4204.15 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
23. RPL11 ENSG00000142676 1525.06 3894.38 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
24. GNAS ENSG00000087460 1466.14 3743.92 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
25. TPT1 ENSG00000133112 1382.95 3531.49 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
26. HNRNPC ENSG00000092199 1344.83 3434.14 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
27. ACTG1 ENSG00000184009 1324.03 3381.03 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
28. RPL23 ENSG00000125691 1285.90 3283.66 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
29. RPS15A ENSG00000134419 1265.11 3230.57 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
30. RPS27A ENSG00000143947 1254.71 3204.01 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
31. HIST1H4C ENSG00000197061 1216.58 3106.65 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
32. RPS13 ENSG00000110700 1213.12 3097.81 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
33. PTMA ENSG00000187514 1192.32 3044.70 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
34. RPS6 ENSG00000137154 1185.39 3027.00 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
35. RPL10 ENSG00000147403 1171.52 2991.58 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
36. RPS3A ENSG00000145425 1126.46 2876.52 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
37. NPM1 ENSG00000181163 1123.00 2867.68 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
38. RPL30 ENSG00000156482 1074.47 2743.76 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
39. RPL7A ENSG00000148303, ENSG00000280858 1046.75 2672.97 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
40. MAB21L3 ENSG00000173212 1012.09 2584.46 mab-21 like 3 [Source:HGNC Symbol;Acc:HGNC:26787]
41. EIF4G2 ENSG00000110321 1005.15 2566.74 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
42. COL1A1 ENSG00000108821 984.36 2513.65 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
43. HMGB1 ENSG00000189403 960.09 2451.68 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
44. RPLP0 ENSG00000089157 949.70 2425.14 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
45. RPS11 ENSG00000142534 946.23 2416.28 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
46. RPS28 ENSG00000233927 946.23 2416.28 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
47. RPL13AP20 ENSG00000234498 939.30 2398.59 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
48. GAPDH ENSG00000111640 932.37 2380.89 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
49. RPS5 ENSG00000083845 911.57 2327.78 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
50. RPS8 ENSG00000142937 901.17 2301.22 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
51. H2AFZ ENSG00000164032 890.77 2274.66 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
52. RPS16 ENSG00000105193 887.31 2265.83 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
53. SERF2 ENSG00000140264 817.99 2088.81 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
54. MYL6 ENSG00000092841 793.72 2026.84 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
55. RPL35 ENSG00000136942 786.79 2009.14 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
56. LINC00504 ENSG00000248360 769.46 1964.89 long intergenic non-protein coding RNA 504 [Source:HGNC Symbol;Acc:HGNC:43555]
57. SRP14 ENSG00000140319 752.13 1920.63 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
58. RPL22 ENSG00000116251 731.34 1867.54 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
59. KCNQ1OT1 ENSG00000269821 727.87 1858.68 KCNQ1 opposite strand/antisense transcript 1 [Source:HGNC Symbol;Acc:HGNC:6295]
60. RPL6 ENSG00000089009 714.01 1823.29 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
61. TMSB4X ENSG00000205542 714.01 1823.29 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
62. UBB ENSG00000170315 707.07 1805.57 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
63. RPL27A ENSG00000166441 703.61 1796.73 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
64. HMGN1 ENSG00000205581 679.34 1734.76 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
65. RPL35A ENSG00000182899 675.88 1725.92 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
66. MDK ENSG00000110492 672.41 1717.06 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
67. RPL26 ENSG00000161970 672.41 1717.06 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
68. TOMM6 ENSG00000214736 672.41 1717.06 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
69. RPL13 ENSG00000167526 662.01 1690.50 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
70. FGB ENSG00000171564 655.08 1672.81 fibrinogen beta chain [Source:HGNC Symbol;Acc:HGNC:3662]
71. RPS29 ENSG00000213741 651.62 1663.97 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
72. RPL18A ENSG00000105640 641.22 1637.41 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
73. NUCKS1 ENSG00000069275 630.82 1610.86 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
74. RPS25 ENSG00000118181, ENSG00000280831 627.35 1601.99 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
75. VIM ENSG00000026025 623.89 1593.16 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
76. MALAT1 ENSG00000251562 620.42 1584.30 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
77. NGFRAP1 NGFRAP1 620.42 1584.30
78. COX7A2 ENSG00000112695 613.49 1566.60 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
79. HSP90AB1 ENSG00000096384 613.49 1566.60 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
80. MTRNR2L2 ENSG00000271043 603.09 1540.04 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
81. RPL9 ENSG00000163682 599.63 1531.21 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
82. TUBA1A ENSG00000167552 596.16 1522.35 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
83. COL1A2 ENSG00000164692 589.23 1504.65 collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
84. SPINK1 ENSG00000164266 589.23 1504.65 serine peptidase inhibitor, Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]
85. HNRNPA1 ENSG00000135486 585.76 1495.79 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
86. UBA52 ENSG00000221983 568.43 1451.54 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
87. TMEM258 ENSG00000134825 561.50 1433.84 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
88. HSP90B1 ENSG00000166598 558.03 1424.98 heat shock protein 90 beta family member 1 [Source:HGNC Symbol;Acc:HGNC:12028]
89. HSPA8 ENSG00000109971 558.03 1424.98 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
90. RPL32 ENSG00000144713 558.03 1424.98 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
91. RPS7 ENSG00000171863 554.57 1416.14 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
92. FAU ENSG00000149806 544.17 1389.59 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
93. RPL7 ENSG00000147604 526.84 1345.33 ribosomal protein L7 [Source:HGNC Symbol;Acc:HGNC:10363]
94. RPS2 ENSG00000140988 516.44 1318.78 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
95. RPL4 ENSG00000174444 506.04 1292.22 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
96. RPLP1 ENSG00000137818 506.04 1292.22 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
97. SRSF2 ENSG00000161547 506.04 1292.22 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
98. HNRNPD ENSG00000138668 502.58 1283.38 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
99. RPS24 ENSG00000138326 502.58 1283.38 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
100. MORF4L1 ENSG00000185787 499.11 1274.52 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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