Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Human data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Human_35d_slice2, section s93.

Sample reads: 391,638. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 6384.39 16301.76 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 5914.62 15102.26 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. SFRP1 ENSG00000104332 4472.53 11420.06 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
4. TUBA1B ENSG00000123416 4366.32 11148.86 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
5. PTMA ENSG00000187514 3452.57 8815.71 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
6. RPS27 ENSG00000177954 3443.17 8791.71 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
7. ACTB ENSG00000075624 3236.20 8263.24 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
8. MDK ENSG00000110492 2693.60 6877.78 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
9. ACTG1 ENSG00000184009 2384.06 6087.40 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
10. GNAS ENSG00000087460 2335.20 5962.65 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
11. RPS12 ENSG00000112306 2247.80 5739.48 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
12. PPIA ENSG00000196262 1984.39 5066.90 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
13. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1860.57 4750.74 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
14. RPL5 ENSG00000122406 1741.61 4446.99 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
15. HIST1H4C ENSG00000197061 1677.58 4283.49 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
16. RPL10A ENSG00000198755 1657.25 4231.58 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
17. RPS6 ENSG00000137154 1620.22 4137.03 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
18. HSP90AB1 ENSG00000096384 1575.61 4023.13 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
19. RPS20 ENSG00000008988 1368.65 3494.68 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
20. MTRNR2L1 ENSG00000256618 1368.34 3493.89 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
21. RPL15 ENSG00000174748 1367.13 3490.80 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
22. HNRNPC ENSG00000092199 1327.98 3390.83 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
23. HMGA2 ENSG00000149948 1301.88 3324.19 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
24. COL3A1 ENSG00000168542 1300.97 3321.87 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
25. RPS3A ENSG00000145425 1186.57 3029.76 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
26. RPL18A ENSG00000105640 1182.92 3020.44 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
27. RPS16 ENSG00000105193 1118.89 2856.95 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
28. COL1A1 ENSG00000108821 1110.09 2834.48 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
29. RPL31 ENSG00000071082 1098.56 2805.04 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
30. RPL34 ENSG00000109475 1095.53 2797.30 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
31. RPL37 ENSG00000145592 1062.14 2712.04 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
32. RPL11 ENSG00000142676 1047.88 2675.63 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
33. PFN1 ENSG00000108518 1044.24 2666.34 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
34. RPS29 ENSG00000213741 1041.81 2660.13 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
35. TPT1 ENSG00000133112 1041.20 2658.58 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
36. HMGB1 ENSG00000189403 1040.29 2656.25 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
37. RPL35 ENSG00000136942 1026.94 2622.17 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
38. RPS2 ENSG00000140988 1023.60 2613.64 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
39. RPL23 ENSG00000125691 1001.15 2556.31 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
40. MTRNR2L8 ENSG00000255823 996.29 2543.90 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
41. NGFRAP1 NGFRAP1 975.65 2491.20
42. RPS15A ENSG00000134419 966.85 2468.73 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
43. RPL7A ENSG00000148303, ENSG00000280858 955.02 2438.53 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
44. STMN1 ENSG00000117632 935.60 2388.94 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
45. HNRNPD ENSG00000138668 906.16 2313.77 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
46. RPS23 ENSG00000186468 901.61 2302.15 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
47. HMGN1 ENSG00000205581 898.27 2293.62 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
48. RPL10 ENSG00000147403 877.94 2241.71 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
49. RPS5 ENSG00000083845 875.81 2236.27 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
50. RPL13 ENSG00000167526 868.23 2216.92 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
51. CFL1 ENSG00000172757 859.43 2194.45 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
52. RPS13 ENSG00000110700 831.20 2122.37 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
53. RPLP0 ENSG00000089157 807.53 2061.93 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
54. RPS8 ENSG00000142937 794.48 2028.61 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
55. NNAT ENSG00000053438 786.59 2008.46 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
56. RPS11 ENSG00000142534 734.40 1875.20 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
57. RPL30 ENSG00000156482 721.95 1843.41 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
58. UBB ENSG00000170315 716.80 1830.26 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
59. EIF4G2 ENSG00000110321 684.93 1748.88 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
60. NPM1 ENSG00000181163 684.02 1746.56 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
61. RPL22 ENSG00000116251 683.72 1745.80 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
62. RPS27A ENSG00000143947 680.38 1737.27 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
63. NUCKS1 ENSG00000069275 663.99 1695.42 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
64. TMSB4X ENSG00000205542 661.87 1690.00 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
65. TUBA1A ENSG00000167552 645.78 1648.92 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
66. SRSF2 ENSG00000161547 639.11 1631.89 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
67. SERF2 ENSG00000140264 630.00 1608.63 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
68. MALAT1 ENSG00000251562 617.56 1576.86 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
69. H2AFZ ENSG00000164032 595.10 1519.51 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
70. MYL6 ENSG00000092841 594.19 1517.19 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
71. RPL13AP20 ENSG00000234498 577.81 1475.37 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
72. HNRNPK ENSG00000165119 576.90 1473.04 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
73. HBE1 ENSG00000213931 574.47 1466.84 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
74. GAPDH ENSG00000111640 558.08 1424.99 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
75. IFITM3 ENSG00000142089 556.26 1420.34 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
76. HNRNPA3 ENSG00000170144 554.14 1414.93 heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]
77. CAPNS1 ENSG00000126247 553.83 1414.14 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
78. IFITM2 ENSG00000185201 550.80 1406.40 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
79. RPL3 ENSG00000100316 550.80 1406.40 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
80. RPL9 ENSG00000163682 546.85 1396.31 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
81. RPS28 ENSG00000233927 545.03 1391.67 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
82. PCBP1 ENSG00000169564 543.51 1387.79 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
83. YBX1 ENSG00000065978 531.38 1356.81 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
84. SRP14 ENSG00000140319 530.16 1353.70 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
85. RPL27A ENSG00000166441 529.86 1352.93 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
86. HNRNPA2B1 ENSG00000122566 526.52 1344.40 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:HGNC Symbol;Acc:HGNC:5033]
87. RPL4 ENSG00000174444 513.77 1311.85 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
88. RPLP1 ENSG00000137818 507.40 1295.58 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
89. H3F3B ENSG00000132475 502.85 1283.97 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
90. RPS7 ENSG00000171863 502.85 1283.97 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
91. RPL32 ENSG00000144713 501.64 1280.88 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
92. MARCKSL1 ENSG00000175130 501.03 1279.32 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
93. HNRNPM ENSG00000099783 491.62 1255.29 heterogeneous nuclear ribonucleoprotein M [Source:HGNC Symbol;Acc:HGNC:5046]
94. ITM2B ENSG00000136156 487.68 1245.23 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
95. ZFP36L1 ENSG00000185650 483.43 1234.38 ZFP36 ring finger protein like 1 [Source:HGNC Symbol;Acc:HGNC:1107]
96. MORF4L1 ENSG00000185787 477.96 1220.41 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
97. PGAM1 ENSG00000171314 468.56 1196.41 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
98. TOMM6 ENSG00000214736 464.00 1184.77 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
99. UBA52 ENSG00000221983 462.49 1180.91 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
100. HNRNPA1L2 ENSG00000139675 458.85 1171.62 heterogeneous nuclear ribonucleoprotein A1-like 2 [Source:HGNC Symbol;Acc:HGNC:27067]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA