Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s92.

Sample reads: 391,628. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 13624.35 34789.03 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 5079.83 12971.07 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPS27 ENSG00000177954 4356.95 11125.23 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. SFRP1 ENSG00000104332 3433.17 8766.41 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
5. RPS12 ENSG00000112306 3423.32 8741.26 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
6. HIST1H4C ENSG00000197061 3413.47 8716.11 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
7. TUBA1B ENSG00000123416 3012.64 7692.61 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
8. PTMA ENSG00000187514 2935.82 7496.46 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
9. PPIA ENSG00000196262 2480.82 6334.64 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
10. RPL10A ENSG00000198755 2453.25 6264.24 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
11. RPL37 ENSG00000145592 2301.58 5876.96 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
12. RPL15 ENSG00000174748 2290.75 5849.30 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
13. ACTB ENSG00000075624 2288.78 5844.27 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
14. RPL5 ENSG00000122406 2088.86 5333.79 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
15. RPS15A ENSG00000134419 1990.37 5082.30 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
16. RPL31 ENSG00000071082 1977.57 5049.62 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
17. RPS6 ENSG00000137154 1946.05 4969.13 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
18. MDK ENSG00000110492 1907.64 4871.05 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
19. RPS20 ENSG00000008988 1869.24 4773.00 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
20. GNAS ENSG00000087460 1855.45 4737.79 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
21. RPL34 ENSG00000109475 1812.12 4627.15 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
22. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1737.27 4436.02 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
23. ACTG1 ENSG00000184009 1687.04 4307.76 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
24. RPL18A ENSG00000105640 1668.33 4259.99 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
25. HBE1 ENSG00000213931 1660.45 4239.87 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
26. RPS3A ENSG00000145425 1660.45 4239.87 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
27. RPL7A ENSG00000148303, ENSG00000280858 1578.71 4031.15 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
28. RPS23 ENSG00000186468 1559.01 3980.85 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
29. RPL23 ENSG00000125691 1551.13 3960.73 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
30. HNRNPC ENSG00000092199 1537.34 3925.51 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
31. RPS29 ENSG00000213741 1500.90 3832.47 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
32. RPS2 ENSG00000140988 1485.15 3792.25 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
33. TPT1 ENSG00000133112 1461.51 3731.89 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
34. RPL35 ENSG00000136942 1360.07 3472.86 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
35. COL3A1 ENSG00000168542 1353.18 3455.27 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
36. RPL30 ENSG00000156482 1313.78 3354.67 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
37. MTRNR2L8 ENSG00000255823 1287.19 3286.77 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
38. RPS11 ENSG00000142534 1264.54 3228.93 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
39. RPLP0 ENSG00000089157 1231.06 3143.44 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
40. UBB ENSG00000170315 1211.36 3093.14 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
41. RPS5 ENSG00000083845 1181.81 3017.69 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
42. RPS16 ENSG00000105193 1168.03 2982.50 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
43. RPL11 ENSG00000142676 1167.04 2979.97 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
44. MTRNR2L1 ENSG00000256618 1154.24 2947.29 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
45. HMGB1 ENSG00000189403 1125.68 2874.36 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
46. RPS13 ENSG00000110700 1117.80 2854.24 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
47. H2AFZ ENSG00000164032 1107.95 2829.09 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
48. RPL10 ENSG00000147403 1090.22 2783.82 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
49. HMGA2 ENSG00000149948 1083.33 2766.22 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
50. HSP90AB1 ENSG00000096384 1045.91 2670.67 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
51. RPL13AP20 ENSG00000234498 1042.95 2663.12 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
52. RPS27A ENSG00000143947 1011.44 2582.66 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
53. RPL13 ENSG00000167526 969.09 2474.52 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
54. HMGN1 ENSG00000205581 967.12 2469.49 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
55. RPL9 ENSG00000163682 955.30 2439.31 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
56. RPS8 ENSG00000142937 941.51 2404.09 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
57. HNRNPD ENSG00000138668 922.80 2356.32 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
58. NGFRAP1 NGFRAP1 916.89 2341.23
59. RPL35A ENSG00000182899 859.77 2195.38 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
60. PFN1 ENSG00000108518 841.06 2147.60 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
61. RPS28 ENSG00000233927 841.06 2147.60 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
62. MYL6 ENSG00000092841 840.07 2145.07 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
63. STMN1 ENSG00000117632 819.39 2092.27 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
64. NPM1 ENSG00000181163 814.47 2079.70 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
65. ID2 ENSG00000115738 769.16 1964.01 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
66. RPL22 ENSG00000116251 727.80 1858.40 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
67. SERF2 ENSG00000140264 709.09 1810.62 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
68. SRP14 ENSG00000140319 696.29 1777.94 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
69. RPS25 ENSG00000118181, ENSG00000280831 690.38 1762.85 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
70. RPS7 ENSG00000171863 683.48 1745.23 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
71. RPLP1 ENSG00000137818 678.56 1732.67 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
72. RPL26 ENSG00000161970 673.63 1720.08 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
73. MALAT1 ENSG00000251562 672.65 1717.57 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
74. COL1A1 ENSG00000108821 663.79 1694.95 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
75. RPL32 ENSG00000144713 661.82 1689.92 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
76. RPL3 ENSG00000100316 650.98 1662.24 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
77. EIF4G2 ENSG00000110321 649.01 1657.21 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
78. RPL27A ENSG00000166441 648.03 1654.71 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
79. FAU ENSG00000149806 628.33 1604.41 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
80. CKS1B ENSG00000173207 622.42 1589.32 CDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]
81. NNAT ENSG00000053438 622.42 1589.32 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
82. GAPDH ENSG00000111640 620.45 1584.28 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
83. TMSB4X ENSG00000205542 620.45 1584.28 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
84. RPS21 ENSG00000171858 611.59 1561.66 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
85. CFL1 ENSG00000172757 609.62 1556.63 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
86. TMEM258 ENSG00000134825 599.77 1531.48 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
87. UBA52 ENSG00000221983 596.82 1523.95 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
88. NUCKS1 ENSG00000069275 582.04 1486.21 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
89. SRSF2 ENSG00000161547 579.09 1478.67 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
90. HNRNPK ENSG00000165119 562.35 1435.93 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
91. MORF4L1 ENSG00000185787 559.39 1428.37 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
92. RPL6 ENSG00000089009 557.42 1423.34 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
93. MTRNR2L2 ENSG00000271043 550.53 1405.75 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
94. PCBP1 ENSG00000169564 549.54 1403.22 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
95. TMA7 ENSG00000232112 523.94 1337.85 translation machinery associated 7 homolog [Source:HGNC Symbol;Acc:HGNC:26932]
96. ZFP36L1 ENSG00000185650 521.97 1332.82 ZFP36 ring finger protein like 1 [Source:HGNC Symbol;Acc:HGNC:1107]
97. ITM2C ENSG00000135916 519.01 1325.26 integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
98. COX7A2 ENSG00000112695 518.03 1322.76 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
99. TMSB10 ENSG00000034510 514.09 1312.70 thymosin beta 10 [Source:HGNC Symbol;Acc:HGNC:11879]
100. YBX1 ENSG00000065978 513.10 1310.17 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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