Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s88.

Sample reads: 391,642. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 12897.04 32931.53 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 5203.12 13285.74 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. SPINK1 ENSG00000164266 3988.87 10185.25 serine peptidase inhibitor, Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]
4. DLK1 ENSG00000185559 3739.99 9549.76 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
5. RPS12 ENSG00000112306 3394.25 8666.94 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
6. MTRNR2L8 ENSG00000255823 2528.12 6455.35 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
7. RPS27 ENSG00000177954 2342.35 5981.00 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
8. RPL5 ENSG00000122406 2324.89 5936.42 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
9. PPIA ENSG00000196262 2322.11 5929.32 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
10. HIST1H4C ENSG00000197061 2315.36 5912.08 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
11. PTMA ENSG00000187514 2189.93 5591.81 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
12. MTRNR2L2 ENSG00000271043 2176.83 5558.36 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
13. RPL10A ENSG00000198755 2127.61 5432.68 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
14. RPL15 ENSG00000174748 2094.66 5348.54 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
15. RPS6 ENSG00000137154 2053.38 5243.14 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
16. RPS23 ENSG00000186468 1922.79 4909.69 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
17. GNAS ENSG00000087460 1835.06 4685.67 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
18. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1831.09 4675.54 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
19. RPS2 ENSG00000140988 1821.57 4651.23 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
20. TUBA1B ENSG00000123416 1806.09 4611.70 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
21. RPL31 ENSG00000071082 1737.81 4437.35 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
22. ACTB ENSG00000075624 1718.76 4388.71 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
23. RPL34 ENSG00000109475 1703.67 4350.18 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
24. RPS20 ENSG00000008988 1623.49 4145.45 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
25. SFRP1 ENSG00000104332 1567.52 4002.53 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
26. MDK ENSG00000110492 1559.58 3982.26 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
27. RPL18A ENSG00000105640 1516.72 3872.82 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
28. RPL37 ENSG00000145592 1504.81 3842.41 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
29. RPL7A ENSG00000148303, ENSG00000280858 1489.72 3803.88 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
30. RPS15A ENSG00000134419 1424.23 3636.65 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
31. TPT1 ENSG00000133112 1345.24 3434.96 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
32. RPS16 ENSG00000105193 1338.89 3418.75 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
33. RPL13AP20 ENSG00000234498 1303.16 3327.51 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
34. ACTG1 ENSG00000184009 1300.38 3320.41 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
35. RPLP0 ENSG00000089157 1292.84 3301.16 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
36. HSP90AB1 ENSG00000096384 1281.73 3272.79 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
37. MTRNR2L1 ENSG00000256618 1280.14 3268.73 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
38. RPL11 ENSG00000142676 1276.17 3258.60 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
39. HNRNPC ENSG00000092199 1193.21 3046.76 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
40. RPL23 ENSG00000125691 1177.33 3006.22 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
41. MALAT1 ENSG00000251562 1161.06 2964.67 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
42. COL3A1 ENSG00000168542 1137.24 2903.85 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
43. RPS27A ENSG00000143947 1135.65 2899.79 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
44. RPL10 ENSG00000147403 1122.95 2867.36 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
45. RPS3A ENSG00000145425 1084.84 2770.05 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
46. RPS5 ENSG00000083845 1060.23 2707.21 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
47. RPS29 ENSG00000213741 1056.66 2698.09 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
48. RPL13 ENSG00000167526 1041.97 2660.58 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
49. RPL35 ENSG00000136942 1026.49 2621.06 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
50. UBB ENSG00000170315 1011.01 2581.53 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
51. SPINT2 ENSG00000167642 1006.25 2569.38 serine peptidase inhibitor, Kunitz type 2 [Source:HGNC Symbol;Acc:HGNC:11247]
52. RPS11 ENSG00000142534 1000.29 2554.16 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
53. HMGN1 ENSG00000205581 994.34 2538.97 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
54. RPS8 ENSG00000142937 963.38 2459.91 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
55. NPM1 ENSG00000181163 946.71 2417.35 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
56. RPL30 ENSG00000156482 877.24 2239.96 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
57. PFN1 ENSG00000108518 860.57 2197.39 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
58. RPS13 ENSG00000110700 853.43 2179.16 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
59. H2AFZ ENSG00000164032 832.39 2125.44 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
60. RPL9 ENSG00000163682 819.29 2091.99 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
61. RPS28 ENSG00000233927 798.65 2039.29 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
62. NGFRAP1 NGFRAP1 795.87 2032.19
63. HMGB1 ENSG00000189403 795.47 2031.17 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
64. RPS7 ENSG00000171863 777.61 1985.56 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
65. RPS25 ENSG00000118181, ENSG00000280831 763.32 1949.07 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
66. HMGA2 ENSG00000149948 748.63 1911.57 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
67. SRP14 ENSG00000140319 737.12 1882.18 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
68. RPL26 ENSG00000161970 727.59 1857.84 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
69. ID2 ENSG00000115738 694.25 1772.71 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
70. STMN1 ENSG00000117632 680.36 1737.24 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
71. SERF2 ENSG00000140264 670.43 1711.89 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
72. SRSF2 ENSG00000161547 665.67 1699.73 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
73. RPL6 ENSG00000089009 664.48 1696.70 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
74. CD24 ENSG00000272398 660.11 1685.54 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
75. COL1A1 ENSG00000108821 636.30 1624.74 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
76. GAPDH ENSG00000111640 622.80 1590.27 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
77. CFL1 ENSG00000172757 617.64 1577.09 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
78. RPL22 ENSG00000116251 611.29 1560.88 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
79. HNRNPD ENSG00000138668 608.12 1552.78 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
80. RPL4 ENSG00000174444 596.60 1523.37 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
81. EIF4G2 ENSG00000110321 577.15 1473.71 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
82. RPL3 ENSG00000100316 576.36 1471.69 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
83. MORF4L1 ENSG00000185787 571.60 1459.53 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
84. FAU ENSG00000149806 570.80 1457.49 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
85. NUCKS1 ENSG00000069275 566.04 1445.34 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
86. HNRNPA1 ENSG00000135486 551.75 1408.85 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
87. RPL32 ENSG00000144713 548.97 1401.75 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
88. TOMM6 ENSG00000214736 539.84 1378.44 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
89. TMEM258 ENSG00000134825 527.93 1348.03 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
90. TMSB4X ENSG00000205542 523.96 1337.89 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
91. PCBP1 ENSG00000169564 521.98 1332.83 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
92. RPL35A ENSG00000182899 514.04 1312.56 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
93. FTH1 ENSG00000167996 511.26 1305.46 ferritin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:3976]
94. UBA52 ENSG00000221983 511.26 1305.46 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
95. SUMO2 ENSG00000188612 508.88 1299.38 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
96. MYL6 ENSG00000092841 505.70 1291.26 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
97. TMSB10 ENSG00000034510 505.70 1291.26 thymosin beta 10 [Source:HGNC Symbol;Acc:HGNC:11879]
98. ATP5G2 503.32 1285.19 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
99. ITM2B ENSG00000136156 502.13 1282.15 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
100. BEX1 ENSG00000133169 500.54 1278.09 brain expressed X-linked 1 [Source:HGNC Symbol;Acc:HGNC:1036]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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