Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s85.

Sample reads: 391,645. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 9741.46 24873.38 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 6370.00 16264.86 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPS27 ENSG00000177954 2993.84 7644.33 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. SFRP1 ENSG00000104332 2922.88 7463.14 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
5. TUBA1B ENSG00000123416 2785.33 7111.93 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
6. RPS12 ENSG00000112306 2599.95 6638.59 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
7. PTMA ENSG00000187514 2495.86 6372.81 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
8. ACTG1 ENSG00000184009 2306.73 5889.90 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
9. RPL10A ENSG00000198755 2306.73 5889.90 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
10. ACTB ENSG00000075624 2275.47 5810.08 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
11. RPL5 ENSG00000122406 2238.58 5715.88 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
12. GNAS ENSG00000087460 2136.98 5456.46 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
13. PPIA ENSG00000196262 2114.16 5398.20 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
14. RPS6 ENSG00000137154 2086.97 5328.77 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
15. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2037.89 5203.45 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
16. RPL15 ENSG00000174748 2034.45 5194.67 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
17. COL3A1 ENSG00000168542 2031.63 5187.47 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
18. MDK ENSG00000110492 2031.01 5185.88 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
19. DLK1 ENSG00000185559 1970.05 5030.23 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
20. RPL31 ENSG00000071082 1610.55 4112.30 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
21. RPS20 ENSG00000008988 1516.77 3872.85 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
22. HSP90AB1 ENSG00000096384 1513.33 3864.07 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
23. RPL7A ENSG00000148303, ENSG00000280858 1478.94 3776.26 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
24. MTRNR2L8 ENSG00000255823 1464.56 3739.54 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
25. RPS16 ENSG00000105193 1442.37 3682.88 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
26. TPT1 ENSG00000133112 1437.06 3669.32 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
27. RPL34 ENSG00000109475 1418.61 3622.21 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
28. HIST1H4C ENSG00000197061 1416.74 3617.44 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
29. RPL37 ENSG00000145592 1415.80 3615.04 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
30. HNRNPC ENSG00000092199 1414.86 3612.64 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
31. RPL11 ENSG00000142676 1393.29 3557.56 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
32. MTRNR2L1 ENSG00000256618 1378.60 3520.05 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
33. RPS3A ENSG00000145425 1347.65 3441.03 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
34. SPINK1 ENSG00000164266 1327.02 3388.35 serine peptidase inhibitor, Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]
35. RPS2 ENSG00000140988 1317.64 3364.40 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
36. RPL18A ENSG00000105640 1307.32 3338.05 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
37. RPL10 ENSG00000147403 1158.52 2958.11 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
38. RPL23 ENSG00000125691 1157.58 2955.71 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
39. RPS15A ENSG00000134419 1118.82 2856.74 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
40. RPS23 ENSG00000186468 1096.94 2800.87 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
41. RPL13 ENSG00000167526 1069.74 2731.42 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
42. RPS5 ENSG00000083845 1063.49 2715.47 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
43. RPLP0 ENSG00000089157 1045.98 2670.76 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
44. RPS29 ENSG00000213741 1021.60 2608.51 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
45. COL1A1 ENSG00000108821 1009.41 2577.38 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
46. RPS8 ENSG00000142937 962.83 2458.44 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
47. NGFRAP1 NGFRAP1 958.77 2448.08
48. RPS13 ENSG00000110700 924.07 2359.48 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
49. RPS27A ENSG00000143947 920.63 2350.69 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
50. RPL13AP20 ENSG00000234498 909.06 2321.15 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
51. NPM1 ENSG00000181163 908.12 2318.75 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
52. RPL35 ENSG00000136942 891.56 2276.47 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
53. MALAT1 ENSG00000251562 882.49 2253.31 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
54. PFN1 ENSG00000108518 871.86 2226.17 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
55. UBB ENSG00000170315 865.61 2210.21 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
56. HMGN1 ENSG00000205581 850.29 2171.09 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
57. MTRNR2L2 ENSG00000271043 843.41 2153.52 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
58. HMGA2 ENSG00000149948 836.22 2135.16 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
59. HMGB1 ENSG00000189403 824.66 2105.65 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
60. RPS11 ENSG00000142534 812.15 2073.71 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
61. CFL1 ENSG00000172757 806.84 2060.15 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
62. RPL9 ENSG00000163682 773.39 1974.74 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
63. RPL30 ENSG00000156482 770.89 1968.35 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
64. RPL22 ENSG00000116251 763.07 1948.39 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
65. STMN1 ENSG00000117632 759.64 1939.63 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
66. EIF4G2 ENSG00000110321 734.00 1874.16 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
67. HNRNPD ENSG00000138668 721.50 1842.24 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
68. SERF2 ENSG00000140264 720.25 1839.05 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
69. RPL27A ENSG00000166441 692.74 1768.81 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
70. RPS28 ENSG00000233927 683.67 1745.65 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
71. RPL6 ENSG00000089009 677.42 1729.69 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
72. RPL3 ENSG00000100316 672.73 1717.72 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
73. H2AFZ ENSG00000164032 632.72 1615.56 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
74. GAPDH ENSG00000111640 628.97 1605.98 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
75. TMSB4X ENSG00000205542 622.40 1589.21 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
76. RPS7 ENSG00000171863 621.15 1586.02 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
77. RPL4 ENSG00000174444 602.08 1537.32 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
78. RPL26 ENSG00000161970 589.58 1505.41 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
79. HNRNPK ENSG00000165119 580.82 1483.04 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
80. PCBP1 ENSG00000169564 576.45 1471.88 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
81. H3F3B ENSG00000132475 573.32 1463.89 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
82. HNRNPA1L2 ENSG00000139675 569.57 1454.31 heterogeneous nuclear ribonucleoprotein A1-like 2 [Source:HGNC Symbol;Acc:HGNC:27067]
83. RPL32 ENSG00000144713 567.69 1449.51 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
84. NUCKS1 ENSG00000069275 564.88 1442.34 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
85. SRP14 ENSG00000140319 563.01 1437.56 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
86. MORF4L1 ENSG00000185787 552.69 1411.21 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
87. FAU ENSG00000149806 551.75 1408.81 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
88. TOMM6 ENSG00000214736 539.87 1378.48 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
89. RPLP1 ENSG00000137818 539.25 1376.90 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
90. MYL6 ENSG00000092841 536.75 1370.51 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
91. SUMO2 ENSG00000188612 536.12 1368.90 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
92. TUBA1A ENSG00000167552 536.12 1368.90 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
93. SRSF2 ENSG00000161547 531.43 1356.93 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
94. ATP5G2 526.43 1344.16 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
95. RPS25 ENSG00000118181, ENSG00000280831 519.55 1326.59 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
96. HNRNPA1 ENSG00000135486 514.86 1314.62 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
97. ID2 ENSG00000115738 512.99 1309.84 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
98. PBX1 ENSG00000185630 510.17 1302.64 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
99. RPL35A ENSG00000182899 506.74 1293.89 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
100. ITM2B ENSG00000136156 494.54 1262.74 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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