Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s82.

Sample reads: 391,648. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 9441.91 24108.28 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 6163.79 15738.17 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. SFRP1 ENSG00000104332 5431.16 13867.52 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
4. RPS27 ENSG00000177954 4130.10 10545.49 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
5. RPS12 ENSG00000112306 3111.73 7945.26 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
6. ACTB ENSG00000075624 2476.23 6322.62 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
7. COL3A1 ENSG00000168542 2333.80 5958.95 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
8. RPL5 ENSG00000122406 2280.22 5822.15 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
9. GNAS ENSG00000087460 2079.86 5310.56 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
10. HIST1H4C ENSG00000197061 2067.23 5278.31 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
11. MTRNR2L8 ENSG00000255823 2054.16 5244.94 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
12. RPL15 ENSG00000174748 2026.29 5173.78 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
13. PTMA ENSG00000187514 1998.84 5103.69 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
14. RPL34 ENSG00000109475 1990.57 5082.57 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
15. PPIA ENSG00000196262 1986.21 5071.44 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
16. RPL37 ENSG00000145592 1968.79 5026.96 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
17. RPS20 ENSG00000008988 1932.64 4934.66 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
18. TUBA1B ENSG00000123416 1909.55 4875.70 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
19. TPT1 ENSG00000133112 1828.10 4667.74 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
20. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1784.54 4556.51 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
21. RPL31 ENSG00000071082 1713.11 4374.13 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
22. ACTG1 ENSG00000184009 1683.05 4297.38 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
23. RPL10A ENSG00000198755 1673.91 4274.04 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
24. SPINK1 ENSG00000164266 1537.57 3925.92 serine peptidase inhibitor, Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]
25. RPL11 ENSG00000142676 1531.04 3909.24 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
26. RPS6 ENSG00000137154 1529.30 3904.80 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
27. MTRNR2L1 ENSG00000256618 1511.87 3860.30 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
28. RPL23 ENSG00000125691 1490.97 3806.93 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
29. RPS15A ENSG00000134419 1458.30 3723.52 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
30. RPS3A ENSG00000145425 1442.62 3683.48 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
31. MDK ENSG00000110492 1431.29 3654.55 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
32. RPS23 ENSG00000186468 1300.19 3319.81 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
33. RPS27A ENSG00000143947 1221.35 3118.51 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
34. RPS29 ENSG00000213741 1153.40 2945.01 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
35. COL1A1 ENSG00000108821 1149.04 2933.87 collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
36. TMSB4X ENSG00000205542 1106.79 2826.00 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
37. RPS13 ENSG00000110700 1038.84 2652.50 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
38. HSP90AB1 ENSG00000096384 1034.92 2642.49 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
39. RPL30 ENSG00000156482 1031.87 2634.70 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
40. HNRNPC ENSG00000092199 979.17 2500.14 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
41. RPL7A ENSG00000148303, ENSG00000280858 959.13 2448.97 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
42. RPS7 ENSG00000171863 954.78 2437.86 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
43. NPM1 ENSG00000181163 951.29 2428.95 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
44. RPL10 ENSG00000147403 943.45 2408.94 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
45. MALAT1 ENSG00000251562 938.22 2395.58 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
46. RPS16 ENSG00000105193 936.05 2390.04 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
47. HMGB1 ENSG00000189403 926.46 2365.55 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
48. EIF4G2 ENSG00000110321 913.83 2333.31 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
49. RPL9 ENSG00000163682 885.08 2259.90 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
50. RPS2 ENSG00000140988 852.42 2176.51 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
51. RPS8 ENSG00000142937 836.74 2136.47 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
52. HBE1 ENSG00000213931 806.25 2058.62 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
53. H2AFZ ENSG00000164032 803.20 2050.83 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
54. RPL18A ENSG00000105640 800.15 2043.04 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
55. RPLP0 ENSG00000089157 786.64 2008.55 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
56. UBB ENSG00000170315 760.07 1940.71 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
57. RPL22 ENSG00000116251 757.90 1935.17 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
58. RPL26 ENSG00000161970 754.41 1926.25 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
59. RPS11 ENSG00000142534 749.62 1914.02 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
60. RPL13AP20 ENSG00000234498 747.44 1908.46 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
61. NGFRAP1 NGFRAP1 743.96 1899.57
62. RPL13 ENSG00000167526 737.86 1884.00 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
63. HMGN1 ENSG00000205581 721.74 1842.84 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
64. RPS5 ENSG00000083845 718.26 1833.95 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
65. GAPDH ENSG00000111640 716.08 1828.39 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
66. RPL32 ENSG00000144713 696.48 1778.34 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
67. RPS28 ENSG00000233927 685.16 1749.44 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
68. SRP14 ENSG00000140319 645.52 1648.22 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
69. RPL35 ENSG00000136942 640.29 1634.87 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
70. RPL27A ENSG00000166441 635.94 1623.76 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
71. MORF4L1 ENSG00000185787 625.05 1595.96 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
72. NUCKS1 ENSG00000069275 622.00 1588.17 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
73. DLK1 ENSG00000185559 621.13 1585.95 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
74. MTRNR2L2 ENSG00000271043 617.21 1575.94 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
75. HNRNPD ENSG00000138668 611.11 1560.36 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
76. RPL35A ENSG00000182899 610.24 1558.14 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
77. ZFP36L1 ENSG00000185650 609.37 1555.92 ZFP36 ring finger protein like 1 [Source:HGNC Symbol;Acc:HGNC:1107]
78. TOMM6 ENSG00000214736 607.19 1550.35 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
79. RPL39 ENSG00000198918 606.75 1549.23 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
80. HNRNPA1 ENSG00000135486 593.69 1515.88 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
81. RPS25 ENSG00000118181, ENSG00000280831 590.64 1508.10 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
82. HMGA2 ENSG00000149948 589.77 1505.88 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
83. HNRNPK ENSG00000165119 567.55 1449.14 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
84. PFN1 ENSG00000108518 555.79 1419.11 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
85. STMN1 ENSG00000117632 553.18 1412.45 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
86. H3F3B ENSG00000132475 540.11 1379.08 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
87. RPL6 ENSG00000089009 539.67 1377.95 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
88. VIM ENSG00000026025 536.19 1369.07 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
89. RPS24 ENSG00000138326 523.12 1335.70 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
90. RPL3 ENSG00000100316 519.20 1325.69 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
91. RPS14 ENSG00000164587 517.03 1320.15 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
92. COX7A2 ENSG00000112695 512.67 1309.01 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
93. RPL7 ENSG00000147604 500.04 1276.77 ribosomal protein L7 [Source:HGNC Symbol;Acc:HGNC:10363]
94. RPS21 ENSG00000171858 498.73 1273.42 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
95. ID2 ENSG00000115738 488.71 1247.84 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
96. PCBP2 ENSG00000197111 486.97 1243.39 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
97. CBX3 ENSG00000122565 484.79 1237.83 chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553]
98. SERF2 ENSG00000140264 475.21 1213.37 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
99. MYL6 ENSG00000092841 473.03 1207.80 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
100. HSPA8 ENSG00000109971 470.85 1202.23 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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